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EnsemblEnsembl Home
Description

patched 1 [Source:HGNC Symbol;Acc:HGNC:9585]

Gene Synonyms

BCNS, NBCCS, PTCH

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
PTCH1-201ENST00000331920.1186621447aaENSP00000332353.6
 
Protein coding
CCDS6714Q13635-1 NM_000264.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:5
PTCH1-205ENST00000430669.682321381aaENSP00000410287.2
 
Protein coding
CCDS47996Q13635-3 -GENCODE basicAPPRIS ALT2TSL:5
PTCH1-206ENST00000437951.679051446aaENSP00000389744.2
 
Protein coding
CCDS47995Q13635-3 NM_001083603.3MANE Plus Clinical v0.93GENCODE basicAPPRIS ALT2TSL:5
PTCH1-204ENST00000429896.665631296aaENSP00000414823.2
 
Protein coding
CCDS43851Q13635-4 -GENCODE basicAPPRIS ALT2TSL:1
PTCH1-207ENST00000468211.61254183aaENSP00000449745.1
 
Protein coding
CCDS87661A0A0C4DGJ5 -GENCODE basicTSL:1
PTCH1-202ENST00000375271.41058352aaENSP00000364420.4
 
Protein coding
-H0Y3B8 -TSL:1CDS 5' and 3' incomplete
PTCH1-223ENST00000553011.51037174aaENSP00000447797.1
 
Protein coding
-A0A0C4DGI4 -TSL:1CDS 3' incomplete
PTCH1-212ENST00000547672.5881174aaENSP00000447878.1
 
Protein coding
-A0A0C4DGI4 -TSL:1CDS 3' incomplete
PTCH1-210ENST00000546820.5864174aaENSP00000448843.1
 
Protein coding
-A0A0C4DGI4 -TSL:1CDS 3' incomplete
PTCH1-222ENST00000551845.5809174aaENSP00000447008.1
 
Protein coding
-A0A0C4DGI4 -TSL:5CDS 3' incomplete
PTCH1-214ENST00000548420.155366aaENSP00000449078.1
 
Protein coding
-F8VXL8 -TSL:5CDS 3' incomplete
PTCH1-221ENST00000551630.153992aaENSP00000450131.1
 
Protein coding
-F8VQS6 -TSL:1CDS 3' incomplete
PTCH1-203ENST00000375290.610631486aaENSP00000364439.2
 
Nonsense mediated decay
-H3BLX7 -TSL:2CDS 5' incomplete
PTCH1-218ENST00000550914.663079aaENSP00000450047.1
 
Nonsense mediated decay
-F8VPA3 -TSL:2
PTCH1-220ENST00000551623.136616aaENSP00000447242.1
 
Nonsense mediated decay
-H0YHK0 -TSL:1CDS 5' incomplete
PTCH1-213ENST00000548379.5548No protein-
 
Processed transcript
---TSL:4
PTCH1-224ENST00000553256.5537No protein-
 
Processed transcript
---TSL:4
PTCH1-211ENST00000547615.1525No protein-
 
Processed transcript
---TSL:5
PTCH1-215ENST00000548945.6243No protein-
 
Processed transcript
---TSL:1
PTCH1-219ENST00000551425.1241No protein-
 
Processed transcript
---TSL:1
PTCH1-209ENST00000546744.54389No protein-
 
Retained intron
---TSL:2
PTCH1-217ENST00000550136.12388No protein-
 
Retained intron
---TSL:2
PTCH1-216ENST00000549678.1578No protein-
 
Retained intron
---TSL:4
PTCH1-208ENST00000488809.2301No protein-
 
Retained intron
---TSL:3
Description

ETS variant transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3490]

Gene Synonyms

ER81

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ETV1-210ENST00000430479.66459477aaENSP00000405327.1
 
Protein coding
CCDS55088P50549-1 NM_004956.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ETV1-201ENST00000242066.96348459aaENSP00000242066.5
 
Protein coding
CCDS55086P50549-2 -GENCODE basicTSL:5
ETV1-208ENST00000420159.66231419aaENSP00000411626.2
 
Protein coding
CCDS55083P50549-5 -GENCODE basicTSL:2
ETV1-202ENST00000399357.76096374aaENSP00000382293.3
 
Protein coding
CCDS55084P50549-4 -GENCODE basicTSL:2
ETV1-205ENST00000405192.64402454aaENSP00000385381.2
 
Protein coding
CCDS55087P50549-3 -GENCODE basicTSL:1
ETV1-206ENST00000405218.63391477aaENSP00000385551.2
 
Protein coding
CCDS55088P50549-1 -GENCODE basicAPPRIS P1TSL:5
ETV1-203ENST00000403527.53363437aaENSP00000384138.1
 
Protein coding
CCDS55085P50549-6 -GENCODE basicTSL:1
ETV1-204ENST00000403685.51603459aaENSP00000385686.1
 
Protein coding
CCDS55086P50549-2 -GENCODE basicTSL:1
ETV1-207ENST00000405358.84181491aaENSP00000384085.4
 
Protein coding
-B5MCT2 -GENCODE basicTSL:5
ETV1-213ENST00000438956.51141288aaENSP00000393078.1
 
Protein coding
-C9JX69 -TSL:1CDS 3' incomplete
ETV1-215ENST00000443608.5784173aaENSP00000394710.1
 
Protein coding
-C9JQH6 -TSL:4CDS 3' incomplete
ETV1-211ENST00000431887.558095aaENSP00000410819.1
 
Protein coding
-C9J9L1 -TSL:4CDS 3' incomplete
ETV1-209ENST00000421381.5554123aaENSP00000391043.1
 
Protein coding
-C9J4P4 -TSL:5CDS 3' incomplete
ETV1-212ENST00000433547.154620aaENSP00000406931.1
 
Protein coding
-C9J0B7 -TSL:5CDS 3' incomplete
ETV1-214ENST00000443137.52050367aaENSP00000413836.1
 
Nonsense mediated decay
-F8WEH6 -TSL:2
ETV1-219ENST00000476720.6848No protein-
 
Processed transcript
---TSL:1
ETV1-220ENST00000483075.1622No protein-
 
Processed transcript
---TSL:5
ETV1-223ENST00000497115.5584No protein-
 
Processed transcript
---TSL:4
ETV1-221ENST00000485475.1550No protein-
 
Processed transcript
---TSL:4
ETV1-217ENST00000472931.61296No protein-
 
Retained intron
---TSL:1
ETV1-218ENST00000476355.5846No protein-
 
Retained intron
---TSL:3
ETV1-216ENST00000460438.5570No protein-
 
Retained intron
---TSL:4
ETV1-222ENST00000493831.1536No protein-
 
Retained intron
---TSL:2
Description

growth hormone receptor [Source:HGNC Symbol;Acc:HGNC:4263]

Gene Synonyms

GHBP

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
GHR-201ENST00000230882.94899638aaENSP00000230882.4
 
Protein coding
CCDS3940P10912-1 NM_000163.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
GHR-210ENST00000615111.44814638aaENSP00000478291.1
 
Protein coding
CCDS3940P10912-1 -GENCODE basicAPPRIS P2TSL:5
GHR-208ENST00000612382.44699638aaENSP00000478332.1
 
Protein coding
CCDS3940P10912-1 -GENCODE basicAPPRIS P2TSL:5
GHR-212ENST00000620156.44529645aaENSP00000483403.1
 
Protein coding
CCDS75239A0A087X0H5 -GENCODE basicAPPRIS ALT2TSL:5
GHR-209ENST00000612626.44524638aaENSP00000479846.1
 
Protein coding
CCDS3940P10912-1 -GENCODE basicAPPRIS P2TSL:5
GHR-211ENST00000618088.44491638aaENSP00000482373.1
 
Protein coding
CCDS3940P10912-1 -GENCODE basicAPPRIS P2TSL:5
GHR-207ENST00000537449.54419638aaENSP00000442206.2
 
Protein coding
CCDS3940P10912-1 -GENCODE basicAPPRIS P2TSL:5
GHR-202ENST00000357703.64316616aaENSP00000350335.3
 
Protein coding
CCDS56364P10912-4 -GENCODE basicTSL:5
GHR-213ENST00000622294.24312295aaENSP00000483926.1
 
Protein coding
CCDS75240A0A087X162 -GENCODE basicTSL:5
GHR-204ENST00000511135.5217385aaENSP00000422333.1
 
Nonsense mediated decay
-E7ES05 -TSL:2
GHR-206ENST00000513671.556662aaENSP00000426739.1
 
Nonsense mediated decay
-E9PCN7 -TSL:4
GHR-205ENST00000513625.1782No protein-
 
Processed transcript
---TSL:3
GHR-203ENST00000505006.1615No protein-
 
Processed transcript
---TSL:2
Description

long intergenic non-protein coding RNA 923 [Source:HGNC Symbol;Acc:HGNC:28088]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC00923-204ENST00000614972.41181No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
LINC00923-214ENST00000664171.14453No protein-
 
lncRNA
--GENCODE basic
LINC00923-209ENST00000647870.13268No protein-
 
lncRNA
--GENCODE basic
LINC00923-217ENST00000671187.13174No protein-
 
lncRNA
--GENCODE basic
LINC00923-206ENST00000618064.22446No protein-
 
lncRNA
--TSL:5
LINC00923-215ENST00000666698.12439No protein-
 
lncRNA
---
LINC00923-210ENST00000655088.12095No protein-
 
lncRNA
---
LINC00923-201ENST00000503768.62036No protein-
 
lncRNA
--TSL:1
LINC00923-212ENST00000664000.11461No protein-
 
lncRNA
---
LINC00923-202ENST00000503874.31460No protein-
 
lncRNA
--TSL:1
LINC00923-213ENST00000664109.11260No protein-
 
lncRNA
---
LINC00923-211ENST00000658023.11005No protein-
 
lncRNA
--GENCODE basic
LINC00923-205ENST00000615399.1932No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00923-216ENST00000670719.1841No protein-
 
lncRNA
--GENCODE basic
LINC00923-207ENST00000619015.1505No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00923-208ENST00000621777.1503No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00923-203ENST00000558179.1359No protein-
 
lncRNA
--TSL:3
Statistics

Exons: 3, Coding exons: 0, Transcript length: 503 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000621777.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

454 RNA-Seq supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x24c5b848)