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EnsemblEnsembl Home
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000626948.3SOX2-OT-2401584No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
ENST00000656613.1SOX2-OT-2924289No protein-
 
lncRNA
--GENCODE basic
ENST00000670501.1SOX2-OT-3024282No protein-
 
lncRNA
---
ENST00000665187.1SOX2-OT-2984263No protein-
 
lncRNA
--GENCODE basic
ENST00000671456.1SOX2-OT-3034240No protein-
 
lncRNA
---
ENST00000657986.1SOX2-OT-2934162No protein-
 
lncRNA
---
ENST00000646698.1SOX2-OT-2824109No protein-
 
lncRNA
---
ENST00000660576.1SOX2-OT-2944101No protein-
 
lncRNA
---
ENST00000600801.7SOX2-OT-2344085No protein-
 
lncRNA
--TSL:5
ENST00000661842.1SOX2-OT-2954077No protein-
 
lncRNA
---
ENST00000654649.1SOX2-OT-2914032No protein-
 
lncRNA
---
ENST00000596250.7SOX2-OT-2253985No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000498731.6SOX2-OT-2183964No protein-
 
lncRNA
--TSL:1
ENST00000645583.2SOX2-OT-2753870No protein-
 
lncRNA
---
ENST00000646841.2SOX2-OT-2843868No protein-
 
lncRNA
---
ENST00000654538.1SOX2-OT-2903844No protein-
 
lncRNA
--GENCODE basic
ENST00000665033.1SOX2-OT-2963529No protein-
 
lncRNA
---
ENST00000665112.1SOX2-OT-2973462No protein-
 
lncRNA
---
ENST00000647055.1SOX2-OT-2873274No protein-
 
lncRNA
--GENCODE basic
ENST00000476964.6SOX2-OT-2073226No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000647034.2SOX2-OT-2863006No protein-
 
lncRNA
--GENCODE basic
ENST00000493116.6SOX2-OT-2142779No protein-
 
lncRNA
--TSL:4
ENST00000643236.2SOX2-OT-2672454No protein-
 
lncRNA
--GENCODE basic
ENST00000665485.1SOX2-OT-2992297No protein-
 
lncRNA
--GENCODE basic
ENST00000642685.1SOX2-OT-2632276No protein-
 
lncRNA
--GENCODE basic
ENST00000642301.2SOX2-OT-2602271No protein-
 
lncRNA
--GENCODE basic
ENST00000492337.6SOX2-OT-2132184No protein-
 
lncRNA
--TSL:2
ENST00000667332.1SOX2-OT-3002112No protein-
 
lncRNA
---
ENST00000646296.2SOX2-OT-2792094No protein-
 
lncRNA
---
ENST00000642652.2SOX2-OT-2622042No protein-
 
lncRNA
--GENCODE basic
ENST00000646949.2SOX2-OT-2851980No protein-
 
lncRNA
--GENCODE basic
ENST00000643769.1SOX2-OT-2691967No protein-
 
lncRNA
--GENCODE basic
ENST00000644582.1SOX2-OT-2721884No protein-
 
lncRNA
--GENCODE basic
ENST00000466034.7SOX2-OT-2031772No protein-
 
lncRNA
--TSL:1
ENST00000646683.1SOX2-OT-2811766No protein-
 
lncRNA
--GENCODE basic
ENST00000644358.1SOX2-OT-2711703No protein-
 
lncRNA
--GENCODE basic
ENST00000628810.2SOX2-OT-2481675No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000643667.1SOX2-OT-2681622No protein-
 
lncRNA
---
ENST00000645423.2SOX2-OT-2741583No protein-
 
lncRNA
---
ENST00000642218.1SOX2-OT-2591500No protein-
 
lncRNA
--GENCODE basic
ENST00000642922.1SOX2-OT-2651468No protein-
 
lncRNA
--GENCODE basic
ENST00000642823.1SOX2-OT-2641444No protein-
 
lncRNA
--GENCODE basic
ENST00000626299.4SOX2-OT-2371412No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000646508.1SOX2-OT-2801390No protein-
 
lncRNA
--GENCODE basic
ENST00000597347.5SOX2-OT-2261342No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000690586.1SOX2-OT-3131327No protein-
 
lncRNA
--GENCODE basic
ENST00000642429.1SOX2-OT-2611279No protein-
 
lncRNA
---
ENST00000644732.1SOX2-OT-2731242No protein-
 
lncRNA
---
ENST00000691318.1SOX2-OT-3141240No protein-
 
lncRNA
---
ENST00000493521.5SOX2-OT-2151239No protein-
 
lncRNA
--TSL:3
ENST00000647552.1SOX2-OT-2891238No protein-
 
lncRNA
---
ENST00000645960.1SOX2-OT-2761199No protein-
 
lncRNA
---
ENST00000485035.3SOX2-OT-2091162No protein-
 
lncRNA
--TSL:4
ENST00000644304.1SOX2-OT-2701115No protein-
 
lncRNA
---
ENST00000643131.2SOX2-OT-2661097No protein-
 
lncRNA
---
ENST00000647179.1SOX2-OT-2881068No protein-
 
lncRNA
---
ENST00000693669.1SOX2-OT-3151055No protein-
 
lncRNA
---
ENST00000491282.6SOX2-OT-2121040No protein-
 
lncRNA
--TSL:1
ENST00000627501.4SOX2-OT-2411036No protein-
 
lncRNA
--TSL:5
ENST00000630482.2SOX2-OT-2551012No protein-
 
lncRNA
--TSL:5
ENST00000646712.1SOX2-OT-283989No protein-
 
lncRNA
---
ENST00000476125.5SOX2-OT-206979No protein-
 
lncRNA
--TSL:3
ENST00000631025.2SOX2-OT-258954No protein-
 
lncRNA
--TSL:5
ENST00000630553.1SOX2-OT-256905No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000477928.1SOX2-OT-208902No protein-
 
lncRNA
--TSL:2
ENST00000627530.3SOX2-OT-242873No protein-
 
lncRNA
--TSL:5
ENST00000597828.5SOX2-OT-228864No protein-
 
lncRNA
--TSL:5
ENST00000685767.1SOX2-OT-306859No protein-
 
lncRNA
---
ENST00000595084.3SOX2-OT-222850No protein-
 
lncRNA
--TSL:5
ENST00000628211.2SOX2-OT-244847No protein-
 
lncRNA
--TSL:5
ENST00000599082.2SOX2-OT-231836No protein-
 
lncRNA
--TSL:5
ENST00000685509.1SOX2-OT-305831No protein-
 
lncRNA
---
ENST00000629781.4SOX2-OT-252818No protein-
 
lncRNA
--TSL:5
ENST00000628496.3SOX2-OT-247798No protein-
 
lncRNA
--TSL:5
ENST00000646056.1SOX2-OT-278796No protein-
 
lncRNA
---
ENST00000686782.1SOX2-OT-308794No protein-
 
lncRNA
---
ENST00000688647.1SOX2-OT-310792No protein-
 
lncRNA
---
ENST00000600386.6SOX2-OT-232789No protein-
 
lncRNA
--TSL:5
ENST00000629112.4SOX2-OT-249782No protein-
 
lncRNA
--TSL:5
ENST00000600778.3SOX2-OT-233762No protein-
 
lncRNA
--TSL:5
ENST00000593549.6SOX2-OT-220753No protein-
 
lncRNA
--TSL:5
ENST00000487240.3SOX2-OT-210751No protein-
 
lncRNA
--TSL:5
ENST00000630887.3SOX2-OT-257745No protein-
 
lncRNA
--TSL:5
ENST00000628343.3SOX2-OT-245743No protein-
 
lncRNA
--TSL:5
ENST00000626802.2SOX2-OT-239737No protein-
 
lncRNA
--TSL:5
ENST00000595313.5SOX2-OT-224716No protein-
 
lncRNA
--TSL:5
ENST00000689495.1SOX2-OT-311705No protein-
 
lncRNA
---
ENST00000685088.1SOX2-OT-304694No protein-
 
lncRNA
---
ENST00000627738.1SOX2-OT-243692No protein-
 
lncRNA
--TSL:5
ENST00000686214.1SOX2-OT-307679No protein-
 
lncRNA
---
ENST00000629830.3SOX2-OT-253677No protein-
 
lncRNA
--TSL:5
ENST00000594942.5SOX2-OT-221675No protein-
 
lncRNA
--TSL:5
ENST00000668295.2SOX2-OT-301671No protein-
 
lncRNA
---
ENST00000626619.2SOX2-OT-238660No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630150.2SOX2-OT-254649No protein-
 
lncRNA
--TSL:5
ENST00000597651.6SOX2-OT-227626No protein-
 
lncRNA
--TSL:5
ENST00000693697.1SOX2-OT-316610No protein-
 
lncRNA
---
ENST00000460739.5SOX2-OT-201609No protein-
 
lncRNA
--TSL:4
ENST00000689942.1SOX2-OT-312585No protein-
 
lncRNA
---
ENST00000595287.1SOX2-OT-223581No protein-
 
lncRNA
--TSL:5
ENST00000497122.5SOX2-OT-216578No protein-
 
lncRNA
--TSL:4
ENST00000629273.2SOX2-OT-250575No protein-
 
lncRNA
--TSL:5
ENST00000629552.2SOX2-OT-251572No protein-
 
lncRNA
--TSL:5
ENST00000687464.1SOX2-OT-309569No protein-
 
lncRNA
---
ENST00000461063.6SOX2-OT-202566No protein-
 
lncRNA
--TSL:3
ENST00000469278.5SOX2-OT-204561No protein-
 
lncRNA
--TSL:4
ENST00000498226.5SOX2-OT-217560No protein-
 
lncRNA
--TSL:4
ENST00000598474.4SOX2-OT-229512No protein-
 
lncRNA
--TSL:5
ENST00000625581.2SOX2-OT-236495No protein-
 
lncRNA
--TSL:5
ENST00000600962.6SOX2-OT-235469No protein-
 
lncRNA
--TSL:5
ENST00000593330.1SOX2-OT-219468No protein-
 
lncRNA
--TSL:3
ENST00000472856.1SOX2-OT-205454No protein-
 
lncRNA
--TSL:2
ENST00000628347.1SOX2-OT-246445No protein-
 
lncRNA
--TSL:5
ENST00000645983.1SOX2-OT-277392No protein-
 
lncRNA
---
ENST00000490005.2SOX2-OT-211383No protein-
 
lncRNA
--TSL:2
ENST00000598867.1SOX2-OT-230348No protein-
 
lncRNA
--TSL:5
Description

early growth response 2 [Source:HGNC Symbol;Acc:HGNC:3239]

Gene Synonyms

KROX20

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000242480.4EGR2-2012979476aaENSP00000242480.3
 
Protein coding
CCDS7267P11161-1 NM_000399.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000411732.4EGR2-2022882426aaENSP00000387634.1
 
Protein coding
CCDS44409P11161-2 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000637191.2EGR2-2042796476aaENSP00000490154.2
 
Protein coding
CCDS7267A0A1B0GUL0 -GENCODE basicAPPRIS P3TSL:4
ENST00000691610.1EGR2-2071490489aaENSP00000509830.1
 
Protein coding
---GENCODE basic
ENST00000439032.6EGR2-2033155174aaENSP00000509775.1
 
Nonsense mediated decay
---TSL:1
ENST00000690143.1EGR2-206164068aaENSP00000510306.1
 
Nonsense mediated decay
----
ENST00000639815.1EGR2-2051075No protein-
 
Processed transcript
---TSL:5
Description

MUC20 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:53807]

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000629807.2MUC20-OT1-319466No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
ENST00000445430.5MUC20-OT1-2124208No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000445707.3MUC20-OT1-2132363No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000429897.5MUC20-OT1-2072131No protein-
 
lncRNA
--TSL:2
ENST00000597482.5MUC20-OT1-2311476No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000453324.5MUC20-OT1-2191439No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000457233.5MUC20-OT1-2211279No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000627562.2MUC20-OT1-2931184No protein-
 
lncRNA
--TSL:5
ENST00000451982.6MUC20-OT1-2171161No protein-
 
lncRNA
--TSL:5
ENST00000631189.2MUC20-OT1-3361156No protein-
 
lncRNA
--TSL:5
ENST00000601955.5MUC20-OT1-2431123No protein-
 
lncRNA
--TSL:5
ENST00000600197.1MUC20-OT1-2381090No protein-
 
lncRNA
--TSL:5
ENST00000593988.2MUC20-OT1-2221072No protein-
 
lncRNA
--TSL:5
ENST00000626617.2MUC20-OT1-2741014No protein-
 
lncRNA
--TSL:5
ENST00000598992.5MUC20-OT1-2351005No protein-
 
lncRNA
--TSL:5
ENST00000627609.1MUC20-OT1-294992No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000625358.2MUC20-OT1-254962No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000608737.3MUC20-OT1-247956No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630243.2MUC20-OT1-324955No protein-
 
lncRNA
--TSL:5
ENST00000594101.3MUC20-OT1-223955No protein-
 
lncRNA
--TSL:5
ENST00000630863.2MUC20-OT1-331954No protein-
 
lncRNA
--TSL:5
ENST00000626220.2MUC20-OT1-268932No protein-
 
lncRNA
--TSL:5
ENST00000627767.1MUC20-OT1-297929No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000630417.2MUC20-OT1-327918No protein-
 
lncRNA
--TSL:5
ENST00000625776.2MUC20-OT1-259911No protein-
 
lncRNA
--TSL:5
ENST00000625632.2MUC20-OT1-257898No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628547.2MUC20-OT1-308882No protein-
 
lncRNA
--TSL:5
ENST00000627502.2MUC20-OT1-290874No protein-
 
lncRNA
--TSL:5
ENST00000627555.2MUC20-OT1-292874No protein-
 
lncRNA
--TSL:5
ENST00000629823.2MUC20-OT1-320869No protein-
 
lncRNA
--TSL:5
ENST00000420851.6MUC20-OT1-204868No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628439.2MUC20-OT1-306864No protein-
 
lncRNA
--TSL:5
ENST00000596584.4MUC20-OT1-229863No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626569.2MUC20-OT1-272857No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000600527.5MUC20-OT1-241852No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626870.2MUC20-OT1-278851No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000627471.2MUC20-OT1-289851No protein-
 
lncRNA
--TSL:5
ENST00000631087.1MUC20-OT1-334848No protein-
 
lncRNA
--TSL:5
ENST00000627152.2MUC20-OT1-285846No protein-
 
lncRNA
--TSL:5
ENST00000626007.2MUC20-OT1-263839No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000597871.1MUC20-OT1-233839No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000629990.1MUC20-OT1-321806No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000625338.1MUC20-OT1-253804No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630830.1MUC20-OT1-330795No protein-
 
lncRNA
--TSL:5
ENST00000628668.2MUC20-OT1-310795No protein-
 
lncRNA
--TSL:5
ENST00000627863.2MUC20-OT1-298793No protein-
 
lncRNA
--TSL:5
ENST00000626089.2MUC20-OT1-264792No protein-
 
lncRNA
--TSL:5
ENST00000630197.2MUC20-OT1-323783No protein-
 
lncRNA
--TSL:5
ENST00000599448.5MUC20-OT1-236780No protein-
 
lncRNA
--TSL:5
ENST00000628392.2MUC20-OT1-305775No protein-
 
lncRNA
--TSL:5
ENST00000628301.2MUC20-OT1-304772No protein-
 
lncRNA
--TSL:5
ENST00000631288.2MUC20-OT1-338764No protein-
 
lncRNA
--TSL:5
ENST00000455807.2MUC20-OT1-220764No protein-
 
lncRNA
--TSL:3
ENST00000629721.2MUC20-OT1-318755No protein-
 
lncRNA
--TSL:5
ENST00000631366.2MUC20-OT1-342751No protein-
 
lncRNA
--TSL:5
ENST00000594976.5MUC20-OT1-226750No protein-
 
lncRNA
--TSL:5
ENST00000602127.5MUC20-OT1-244749No protein-
 
lncRNA
--TSL:5
ENST00000630663.1MUC20-OT1-328746No protein-
 
lncRNA
--TSL:5
ENST00000601648.5MUC20-OT1-242745No protein-
 
lncRNA
--TSL:3
ENST00000626969.2MUC20-OT1-281745No protein-
 
lncRNA
--TSL:5
ENST00000594446.5MUC20-OT1-224740No protein-
 
lncRNA
--TSL:5
ENST00000630874.2MUC20-OT1-332738No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000432601.3MUC20-OT1-210732No protein-
 
lncRNA
--TSL:5
ENST00000597034.5MUC20-OT1-230731No protein-
 
lncRNA
--TSL:5
ENST00000627363.2MUC20-OT1-288731No protein-
 
lncRNA
--TSL:5
ENST00000414625.6MUC20-OT1-201729No protein-
 
lncRNA
--TSL:5
ENST00000594715.5MUC20-OT1-225729No protein-
 
lncRNA
--TSL:5
ENST00000600288.5MUC20-OT1-239728No protein-
 
lncRNA
--TSL:5
ENST00000599566.5MUC20-OT1-237718No protein-
 
lncRNA
--TSL:5
ENST00000630387.2MUC20-OT1-325714No protein-
 
lncRNA
--TSL:5
ENST00000615493.4MUC20-OT1-250712No protein-
 
lncRNA
--TSL:5
ENST00000627297.2MUC20-OT1-286708No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000595086.5MUC20-OT1-227704No protein-
 
lncRNA
--TSL:5
ENST00000631105.2MUC20-OT1-335702No protein-
 
lncRNA
--TSL:5
ENST00000620737.3MUC20-OT1-252702No protein-
 
lncRNA
--TSL:5
ENST00000631359.2MUC20-OT1-341702No protein-
 
lncRNA
--TSL:5
ENST00000626979.2MUC20-OT1-282698No protein-
 
lncRNA
--TSL:5
ENST00000417704.5MUC20-OT1-202694No protein-
 
lncRNA
--TSL:3
ENST00000625824.2MUC20-OT1-260692No protein-
 
lncRNA
--TSL:5
ENST00000626156.1MUC20-OT1-266683No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000602175.5MUC20-OT1-245673No protein-
 
lncRNA
--TSL:5
ENST00000629686.2MUC20-OT1-317669No protein-
 
lncRNA
--TSL:5
ENST00000628125.2MUC20-OT1-302668No protein-
 
lncRNA
--TSL:5
ENST00000629537.2MUC20-OT1-316666No protein-
 
lncRNA
--TSL:5
ENST00000595382.5MUC20-OT1-228659No protein-
 
lncRNA
--TSL:5
ENST00000626346.2MUC20-OT1-270652No protein-
 
lncRNA
--TSL:5
ENST00000626872.2MUC20-OT1-279649No protein-
 
lncRNA
--TSL:5
ENST00000626233.2MUC20-OT1-269644No protein-
 
lncRNA
--TSL:5
ENST00000627512.2MUC20-OT1-291642No protein-
 
lncRNA
--TSL:5
ENST00000627993.2MUC20-OT1-299633No protein-
 
lncRNA
--TSL:5
ENST00000628823.2MUC20-OT1-312616No protein-
 
lncRNA
--TSL:5
ENST00000625971.2MUC20-OT1-262615No protein-
 
lncRNA
--TSL:5
ENST00000625383.2MUC20-OT1-255612No protein-
 
lncRNA
--TSL:5
ENST00000626706.1MUC20-OT1-276608No protein-
 
lncRNA
--TSL:5
ENST00000630675.2MUC20-OT1-329608No protein-
 
lncRNA
--TSL:5
ENST00000618708.3MUC20-OT1-251606No protein-
 
lncRNA
--TSL:5
ENST00000451228.5MUC20-OT1-216604No protein-
 
lncRNA
--TSL:3
ENST00000600382.5MUC20-OT1-240599No protein-
 
lncRNA
--TSL:5
ENST00000626904.2MUC20-OT1-280598No protein-
 
lncRNA
--TSL:5
ENST00000612098.4MUC20-OT1-248592No protein-
 
lncRNA
--TSL:5
ENST00000446521.1MUC20-OT1-214584No protein-
 
lncRNA
--TSL:4
ENST00000630170.2MUC20-OT1-322584No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000452844.5MUC20-OT1-218583No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000628053.2MUC20-OT1-301582No protein-
 
lncRNA
--TSL:5
ENST00000597982.5MUC20-OT1-234579No protein-
 
lncRNA
--TSL:5
ENST00000597662.5MUC20-OT1-232570No protein-
 
lncRNA
--TSL:5
ENST00000630415.2MUC20-OT1-326560No protein-
 
lncRNA
--TSL:5
ENST00000628982.1MUC20-OT1-314554No protein-
 
lncRNA
--TSL:5
ENST00000628195.2MUC20-OT1-303552No protein-
 
lncRNA
--TSL:5
ENST00000626585.2MUC20-OT1-273544No protein-
 
lncRNA
--TSL:5
ENST00000420459.5MUC20-OT1-203543No protein-
 
lncRNA
--TSL:2
ENST00000628508.2MUC20-OT1-307542No protein-
 
lncRNA
--TSL:5
ENST00000425425.1MUC20-OT1-206525No protein-
 
lncRNA
--TSL:2
ENST00000438608.5MUC20-OT1-211525No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000631352.2MUC20-OT1-340523No protein-
 
lncRNA
--TSL:5
ENST00000626566.2MUC20-OT1-271521No protein-
 
lncRNA
--TSL:5
ENST00000627356.2MUC20-OT1-287519No protein-
 
lncRNA
--TSL:5
ENST00000628003.2MUC20-OT1-300511No protein-
 
lncRNA
--TSL:5
ENST00000626852.2MUC20-OT1-277511No protein-
 
lncRNA
--TSL:5
ENST00000627718.2MUC20-OT1-296510No protein-
 
lncRNA
--TSL:5
ENST00000631345.2MUC20-OT1-339507No protein-
 
lncRNA
--TSL:5
ENST00000432194.7MUC20-OT1-209503No protein-
 
lncRNA
--TSL:5
ENST00000627016.2MUC20-OT1-283503No protein-
 
lncRNA
--TSL:5
ENST00000625665.1MUC20-OT1-258496No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628917.2MUC20-OT1-313490No protein-
 
lncRNA
--TSL:5
ENST00000431767.5MUC20-OT1-208486No protein-
 
lncRNA
--TSL:5
ENST00000625882.2MUC20-OT1-261484No protein-
 
lncRNA
--TSL:5
ENST00000615212.4MUC20-OT1-249473No protein-
 
lncRNA
--TSL:5
ENST00000625531.2MUC20-OT1-256468No protein-
 
lncRNA
--TSL:5
ENST00000628567.2MUC20-OT1-309463No protein-
 
lncRNA
--TSL:5
ENST00000627035.2MUC20-OT1-284458No protein-
 
lncRNA
--TSL:5
ENST00000631263.2MUC20-OT1-337455No protein-
 
lncRNA
--TSL:5
ENST00000631037.2MUC20-OT1-333451No protein-
 
lncRNA
--TSL:5
ENST00000424730.5MUC20-OT1-205431No protein-
 
lncRNA
--TSL:5
ENST00000628754.2MUC20-OT1-311430No protein-
 
lncRNA
--TSL:5
ENST00000608699.3MUC20-OT1-246415No protein-
 
lncRNA
--TSL:5
ENST00000627689.2MUC20-OT1-295409No protein-
 
lncRNA
--TSL:5
ENST00000451216.6MUC20-OT1-215405No protein-
 
lncRNA
--TSL:5
ENST00000629511.2MUC20-OT1-315393No protein-
 
lncRNA
--TSL:5
ENST00000626677.1MUC20-OT1-275378No protein-
 
lncRNA
--TSL:5
ENST00000626178.2MUC20-OT1-267342No protein-
 
lncRNA
--TSL:5
ENST00000626093.1MUC20-OT1-265229No protein-
 
lncRNA
--TSL:5
Description

glutamate dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:4335]

Gene Synonyms

GDH, GLUD

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000277865.5GLUD1-2013300558aaENSP00000277865.4
 
Protein coding
CCDS7382P00367-1 NM_005271.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000683269.1GLUD1-2133085391aaENSP00000508107.1
 
Protein coding
---GENCODE basic
ENST00000684338.1GLUD1-2202979532aaENSP00000507457.1
 
Protein coding
---GENCODE basic
ENST00000681988.1GLUD1-2062777391aaENSP00000507316.1
 
Protein coding
---GENCODE basic
ENST00000683256.1GLUD1-2122719391aaENSP00000507901.1
 
Protein coding
---GENCODE basic
ENST00000684201.1GLUD1-2192623466aaENSP00000507887.1
 
Protein coding
---GENCODE basic
ENST00000683783.1GLUD1-2162570391aaENSP00000507881.1
 
Protein coding
---GENCODE basic
ENST00000682507.1GLUD1-2082533391aaENSP00000508098.1
 
Protein coding
---GENCODE basic
ENST00000684546.1GLUD1-2242491391aaENSP00000507729.1
 
Protein coding
---GENCODE basic
ENST00000684372.1GLUD1-2212037391aaENSP00000508244.1
 
Protein coding
---GENCODE basic
ENST00000682622.1GLUD1-2092958153aaENSP00000506732.1
 
Nonsense mediated decay
----
ENST00000683022.1GLUD1-211294947aaENSP00000508288.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000682396.1GLUD1-207291973aaENSP00000506764.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000684032.1GLUD1-218275943aaENSP00000506969.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000684434.1GLUD1-223228139aaENSP00000507505.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000682833.1GLUD1-2101732171aaENSP00000507701.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000683649.1GLUD1-2151673No protein-
 
Processed transcript
----
ENST00000465164.1GLUD1-202503No protein-
 
Processed transcript
---TSL:2
ENST00000683647.1GLUD1-2146257No protein-
 
Retained intron
----
ENST00000684699.1GLUD1-2275521No protein-
 
Retained intron
----
ENST00000474574.2GLUD1-2034498No protein-
 
Retained intron
---TSL:3
ENST00000684690.1GLUD1-2263119No protein-
 
Retained intron
----
ENST00000681987.1GLUD1-2052766No protein-
 
Retained intron
----
ENST00000683813.1GLUD1-2172651No protein-
 
Retained intron
----
ENST00000487058.2GLUD1-2042643No protein-
 
Retained intron
---TSL:3
ENST00000684392.1GLUD1-2221889No protein-
 
Retained intron
----
ENST00000684665.1GLUD1-2251781No protein-
 
Retained intron
----
Description

calpastatin [Source:HGNC Symbol;Acc:HGNC:1515]

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000675179.1CAST-2504490791aaENSP00000501872.1
 
Protein coding
-P20810-6 NM_001750.7MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT2
ENST00000395812.6CAST-2064506750aaENSP00000379157.2
 
Protein coding
CCDS54882P20810-9 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000674984.1CAST-2474330769aaENSP00000501713.1
 
Protein coding
CCDS43344P20810-10 -GENCODE basicAPPRIS ALT2
ENST00000309190.9CAST-2014282686aaENSP00000312523.5
 
Protein coding
CCDS4082P20810-8 -GENCODE basicAPPRIS P3TSL:1
ENST00000338252.7CAST-2032972695aaENSP00000343421.3
 
Protein coding
CCDS54883P20810-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000504465.5CAST-2132336636aaENSP00000425670.1
 
Protein coding
CCDS75279E9PDE4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000509903.5CAST-2282171673aaENSP00000426946.1
 
Protein coding
CCDS83017E9PCH5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000395813.5CAST-2074356708aaENSP00000379158.2
 
Protein coding
-P20810-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000675033.1CAST-2484296667aaENSP00000501659.1
 
Protein coding
-P20810-4 -GENCODE basicAPPRIS ALT2
ENST00000675663.1CAST-2574263754aaENSP00000502449.1
 
Protein coding
-A0A6Q8PH20 -GENCODE basicAPPRIS ALT2
ENST00000674702.1CAST-2464067704aaENSP00000502345.1
 
Protein coding
-A0A6Q8PGN6 -GENCODE basicAPPRIS ALT2
ENST00000674587.1CAST-2454024609aaENSP00000501797.1
 
Protein coding
-A0A6Q8PFF6 -GENCODE basic
ENST00000675479.1CAST-2553991662aaENSP00000502244.1
 
Protein coding
-A0A6Q8PGG5 -GENCODE basicAPPRIS ALT2
ENST00000437034.6CAST-2093377436aaENSP00000412374.2
 
Protein coding
-H0Y7F0 -TSL:1CDS 5' incomplete
ENST00000325674.11CAST-2023356430aaENSP00000320319.8
 
Protein coding
-H0YD33 -GENCODE basicTSL:5
ENST00000511049.5CAST-2343273693aaENSP00000421130.1
 
Protein coding
-E7EVY3 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000675185.1CAST-2512772252aaENSP00000501838.1
 
Protein coding
-A0A6Q8PFL0 -CDS 5' incomplete
ENST00000675614.1CAST-2562727681aaENSP00000502136.1
 
Protein coding
-A0A6Q8PG72 -GENCODE basicAPPRIS ALT2
ENST00000508608.6CAST-2232699741aaENSP00000422677.2
 
Protein coding
-A0A0C4DGB5 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000508830.5CAST-2242539791aaENSP00000425721.1
 
Protein coding
-P20810-6 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000675858.1CAST-2592529615aaENSP00000501780.1
 
Protein coding
-A0A6Q8PFE5 -GENCODE basic
ENST00000341926.7CAST-2042487708aaENSP00000339914.3
 
Protein coding
-P20810-1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000511782.5CAST-2362466694aaENSP00000423638.1
 
Protein coding
-B7Z574 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000510756.6CAST-2332428667aaENSP00000422176.2
 
Protein coding
-P20810-4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000510156.5CAST-2302079642aaENSP00000422325.1
 
Protein coding
-E7ES10 -TSL:5CDS 3' incomplete
ENST00000510500.5CAST-2321835465aaENSP00000424160.1
 
Protein coding
-H0Y9H6 -TSL:1CDS 5' incomplete
ENST00000508579.5CAST-2221758423aaENSP00000425787.1
 
Protein coding
-E7EQ12 -GENCODE basicTSL:2
ENST00000515663.5CAST-2441473431aaENSP00000422929.1
 
Protein coding
-E7EQA0 -GENCODE basicTSL:2
ENST00000511097.6CAST-2351399393aaENSP00000422951.2
 
Protein coding
-F8W7E0 -TSL:5CDS 3' incomplete
ENST00000421689.6CAST-208913304aaENSP00000396558.2
 
Protein coding
-E9PSG1 -TSL:5CDS 3' incomplete
ENST00000512620.5CAST-238904301aaENSP00000426422.1
 
Protein coding
-H0YA91 -TSL:5CDS 5' and 3' incomplete
ENST00000505143.5CAST-215864288aaENSP00000422957.1
 
Protein coding
-H0Y944 -TSL:3CDS 5' and 3' incomplete
ENST00000514845.5CAST-241588150aaENSP00000422612.1
 
Protein coding
-D6RBR1 -TSL:4CDS 3' incomplete
ENST00000506811.5CAST-217582156aaENSP00000427092.1
 
Protein coding
-E7EN75 -TSL:5CDS 3' incomplete
ENST00000508197.1CAST-221567156aaENSP00000422831.1
 
Protein coding
-E7EQK6 -TSL:3CDS 3' incomplete
ENST00000509259.5CAST-22556591aaENSP00000423846.1
 
Protein coding
-D6RC54 -TSL:4CDS 3' incomplete
ENST00000514055.5CAST-240559149aaENSP00000421230.1
 
Protein coding
-D6RGF7 -TSL:5CDS 3' incomplete
ENST00000503828.5CAST-21149978aaENSP00000422807.1
 
Protein coding
-D6RAA8 -TSL:2CDS 3' incomplete
ENST00000675266.1CAST-252432381aaENSP00000502619.1
 
Nonsense mediated decay
-A0A6Q8PH83 -CDS 5' incomplete
ENST00000675267.1CAST-2534300110aaENSP00000502095.1
 
Nonsense mediated decay
-A0A6Q8PG40 --
ENST00000484552.6CAST-2101767430aaENSP00000432878.2
 
Nonsense mediated decay
-H0YD33 -TSL:1
ENST00000675275.1CAST-254139994aaENSP00000501916.1
 
Nonsense mediated decay
-A0A6Q8PFR3 -CDS 5' incomplete
ENST00000510098.1CAST-2291323203aaENSP00000427195.1
 
Nonsense mediated decay
-A0A0C4DGD1 -TSL:1
ENST00000508117.6CAST-22057182aaENSP00000422466.1
 
Nonsense mediated decay
-D6RBZ8 -TSL:5
ENST00000348386.7CAST-2052272No protein-
 
Processed transcript
---TSL:1
ENST00000675734.1CAST-2581111No protein-
 
Processed transcript
----
ENST00000504221.5CAST-212578No protein-
 
Processed transcript
---TSL:3
ENST00000509602.1CAST-227557No protein-
 
Processed transcript
---TSL:4
ENST00000507836.1CAST-219449No protein-
 
Processed transcript
---TSL:3
ENST00000507487.5CAST-218396No protein-
 
Processed transcript
---TSL:5
ENST00000505402.1CAST-216362No protein-
 
Processed transcript
---TSL:4
ENST00000675107.1CAST-2493117No protein-
 
Retained intron
----
ENST00000509529.1CAST-2263066No protein-
 
Retained intron
---TSL:2
ENST00000513666.5CAST-2391539No protein-
 
Retained intron
---TSL:2
ENST00000504532.1CAST-214714No protein-
 
Retained intron
---TSL:2
ENST00000515063.1CAST-242654No protein-
 
Retained intron
---TSL:1
ENST00000515160.5CAST-243617No protein-
 
Retained intron
---TSL:2
ENST00000510245.1CAST-231561No protein-
 
Retained intron
---TSL:4
ENST00000512191.1CAST-237406No protein-
 
Retained intron
---TSL:2
Description

sodium channel, voltage-gated, type IX, alpha [Source:MGI Symbol;Acc:MGI:107636]

Gene Synonyms

PN1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000100064.9Scn9a-20298401984aaENSMUSP00000097642.3
 
Protein coding
CCDS71063Q62205 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000100063.9Scn9a-20198131975aaENSMUSP00000097641.3
 
Protein coding
-F8VPQ7 GENCODE basicTSL:5
ENSMUST00000164384.9Scn9a-20675301984aaENSMUSP00000126528.3
 
Protein coding
-Q62205 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000169900.8Scn9a-20774971973aaENSMUSP00000131711.2
 
Protein coding
-E9PW82 GENCODE basicTSL:5
ENSMUST00000112354.3Scn9a-20364711973aaENSMUSP00000107973.2
 
Protein coding
-B1AYL0 GENCODE basicTSL:5
ENSMUST00000141603.3Scn9a-2043642No protein-
 
Retained intron
--TSL:2
ENSMUST00000151234.2Scn9a-205762No protein-
 
Retained intron
--TSL:5
Description

long intergenic non-protein coding RNA 847 [Source:HGNC Symbol;Acc:HGNC:45050]

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000651233.1LINC00847-2064044No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000501855.6LINC00847-2011871No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000659553.1LINC00847-2151817No protein-
 
lncRNA
---
ENST00000502162.2LINC00847-2031809No protein-
 
lncRNA
--TSL:1
ENST00000501937.2LINC00847-2021809No protein-
 
lncRNA
--TSL:2
ENST00000658025.1LINC00847-2121779No protein-
 
lncRNA
---
ENST00000654313.1LINC00847-2101762No protein-
 
lncRNA
---
ENST00000661810.1LINC00847-2191738No protein-
 
lncRNA
---
ENST00000657229.1LINC00847-2111713No protein-
 
lncRNA
---
ENST00000653411.1LINC00847-2081708No protein-
 
lncRNA
---
ENST00000659497.1LINC00847-2141703No protein-
 
lncRNA
---
ENST00000661444.1LINC00847-2181683No protein-
 
lncRNA
---
ENST00000509921.2LINC00847-2051648No protein-
 
lncRNA
--TSL:3
ENST00000660674.1LINC00847-2161602No protein-
 
lncRNA
---
ENST00000658585.1LINC00847-2131594No protein-
 
lncRNA
---
ENST00000652659.1LINC00847-2071498No protein-
 
lncRNA
---
ENST00000665473.1LINC00847-2211445No protein-
 
lncRNA
---
ENST00000653584.1LINC00847-2091365No protein-
 
lncRNA
---
ENST00000667360.1LINC00847-2221321No protein-
 
lncRNA
--GENCODE basic
ENST00000661298.1LINC00847-2171267No protein-
 
lncRNA
---
ENST00000508309.2LINC00847-2041231No protein-
 
lncRNA
--TSL:2
ENST00000662722.1LINC00847-2201160No protein-
 
lncRNA
---
Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,703 bps,

Version

ENST00000659497.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x28c98540)