Ensembl mobile site help

Things to know when navigating the Ensembl mobile site

Search box

Use the search box at the top right of all Ensembl views to search for a gene, phenotype, sequence variant, and more.

Top navigation

Touch MENU button to open the main menu and touch again to close.

Touch MENU

Left hand side menu

Touch the left menu icon () or swipe right to open the side menu and touch anywhere outside the menu or touch the cross icon or swipe left to close.

The ? icon

Touch the icon to get help

And don't forget to send us your comments using the feedback link inside the main menu.

EnsemblEnsembl Home
Description

HCLS1 associated X-1 [Source:MGI Symbol;Acc:MGI:1346319]

Gene Synonyms

HAX-1, HS1-associated protein X-1, Hs1bp1, Silg111, mHAX-1s

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000079724.9Hax1-2011139280aaENSMUSP00000078661.5
 
Protein coding
CCDS17519B9EJR4 O35387 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000197786.5Hax1-206857196aaENSMUSP00000142627.2
 
Protein coding
CCDS79957A0A0G2JE46 GENCODE basicTSL:1
ENSMUST00000198782.2Hax1-207855254aaENSMUSP00000143155.2
 
Protein coding
CCDS79956A0A0G2JFF9 GENCODE basicTSL:5
ENSMUST00000197767.5Hax1-2051092277aaENSMUSP00000142445.2
 
Protein coding
-A0A0G2JDP0 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000197725.5Hax1-204648151aaENSMUSP00000142741.2
 
Protein coding
-A0A0G2JEE6 GENCODE basicTSL:5
ENSMUST00000199740.2Hax1-21237269aaENSMUSP00000143557.2
 
Protein coding
-A0A0G2JGG5 TSL:3CDS 3' incomplete
ENSMUST00000197432.5Hax1-20237066aaENSMUSP00000143136.2
 
Protein coding
-A0A0G2JFE1 TSL:2CDS 5' incomplete
ENSMUST00000199163.2Hax1-21087736aaENSMUSP00000143663.2
 
Nonsense mediated decay
-A0A0G2JGR0 TSL:5
ENSMUST00000199014.5Hax1-2091280No protein-
 
Retained intron
--TSL:1
ENSMUST00000199469.2Hax1-211837No protein-
 
Retained intron
--TSL:2
ENSMUST00000198889.2Hax1-208522No protein-
 
Retained intron
--TSL:3
ENSMUST00000197481.2Hax1-203395No protein-
 
Retained intron
--TSL:1
Description

ribonuclease H2 subunit B [Source:HGNC Symbol;Acc:HGNC:25671]

Gene Synonyms

AGS2, DLEU8, FLJ11712

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000336617.8RNASEH2B-2011513312aaENSP00000337623.2
 
Protein coding
CCDS9425Q5TBB1-1 NM_024570.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000422660.6RNASEH2B-2024885257aaENSP00000389877.1
 
Protein coding
CCDS45047Q5TBB1-2 -GENCODE basicTSL:5
ENST00000646709.1RNASEH2B-2424003282aaENSP00000495278.1
 
Protein coding
-A0A087WXR7 -GENCODE basic
ENST00000616907.2RNASEH2B-2083410289aaENSP00000482701.2
 
Protein coding
-A0A087WZJ6 -GENCODE basicTSL:3
ENST00000643159.1RNASEH2B-2162155324aaENSP00000495587.1
 
Protein coding
-A0A2R8YEH2 -GENCODE basic
ENST00000643774.1RNASEH2B-2221837300aaENSP00000495482.1
 
Protein coding
-A0A2R8Y6Q6 -GENCODE basic
ENST00000645955.1RNASEH2B-2371829289aaENSP00000495755.1
 
Protein coding
-A0A2R8Y761 -GENCODE basic
ENST00000646960.1RNASEH2B-2441711355aaENSP00000496481.1
 
Protein coding
-A0A2R8Y7R8 -GENCODE basic
ENST00000645618.1RNASEH2B-2341700263aaENSP00000495429.1
 
Protein coding
-A0A2R8Y6M7 -GENCODE basic
ENST00000646731.1RNASEH2B-2431567254aaENSP00000493828.1
 
Protein coding
-A0A2R8YCP1 -GENCODE basic
ENST00000645188.1RNASEH2B-2291525309aaENSP00000496224.1
 
Protein coding
-A0A2R8YGP2 -GENCODE basicAPPRIS ALT1
ENST00000642454.1RNASEH2B-2131407227aaENSP00000494221.1
 
Protein coding
-A0A2R8YEC1 -GENCODE basic
ENST00000643682.1RNASEH2B-2211366293aaENSP00000493655.1
 
Protein coding
-A0A2R8YCJ4 -GENCODE basic
ENST00000645990.1RNASEH2B-2381323266aaENSP00000496571.1
 
Protein coding
-A0A2R8Y883 -GENCODE basic
ENST00000611510.5RNASEH2B-2061257282aaENSP00000481236.3
 
Protein coding
-A0A087WXR7 -GENCODE basicTSL:5
ENST00000647387.1RNASEH2B-2461251227aaENSP00000495487.1
 
Protein coding
-A0A2R8YEC1 -GENCODE basic
ENST00000643215.1RNASEH2B-2171185238aaENSP00000495031.1
 
Protein coding
-A0A2R8Y687 -CDS 5' incomplete
ENST00000645370.1RNASEH2B-2321139229aaENSP00000494019.1
 
Protein coding
-A0A2R8Y4S2 -CDS 5' incomplete
ENST00000642721.1RNASEH2B-2141033320aaENSP00000495650.1
 
Protein coding
-A0A2R8Y6Y1 -CDS 3' incomplete
ENST00000642995.1RNASEH2B-215922273aaENSP00000493499.1
 
Protein coding
-A0A2R8YCX2 -GENCODE basic
ENST00000637648.2RNASEH2B-21178089aaENSP00000490077.2
 
Protein coding
-A0A1B0GUE7 -TSL:3CDS 3' incomplete
ENST00000645912.1RNASEH2B-23674692aaENSP00000494091.1
 
Protein coding
-A0A2R8Y4Y9 -CDS 5' incomplete
ENST00000644034.1RNASEH2B-223621128aaENSP00000495456.1
 
Protein coding
-A0A2R8YEB4 -GENCODE basic
ENST00000643529.1RNASEH2B-220508104aaENSP00000495920.1
 
Protein coding
-A0A2R8YEU9 -CDS 5' incomplete
ENST00000643405.1RNASEH2B-218492164aaENSP00000493777.1
 
Protein coding
-A0A2R8Y459 -CDS 5' and 3' incomplete
ENST00000636524.2RNASEH2B-2104666aaENSP00000489723.2
 
Protein coding
-A0A1B0GTJ2 -TSL:4CDS 3' incomplete
ENST00000644183.1RNASEH2B-224173276aaENSP00000495657.1
 
Nonsense mediated decay
-A0A2R8YEK5 -CDS 5' incomplete
ENST00000646092.1RNASEH2B-2391441268aaENSP00000496293.1
 
Nonsense mediated decay
-A0A2R8Y7Q3 --
ENST00000644297.1RNASEH2B-225142848aaENSP00000495519.1
 
Nonsense mediated decay
-A0A2R8YEQ4 --
ENST00000644425.1RNASEH2B-2271166243aaENSP00000495302.1
 
Nonsense mediated decay
-A0A2R8YE60 -CDS 5' incomplete
ENST00000644518.1RNASEH2B-228104448aaENSP00000495793.1
 
Nonsense mediated decay
-A0A2R8YEQ4 --
ENST00000642207.1RNASEH2B-21270763aaENSP00000496227.1
 
Nonsense mediated decay
-A0A2R8Y7M7 -CDS 5' incomplete
ENST00000646339.1RNASEH2B-24163033aaENSP00000495773.1
 
Nonsense mediated decay
-A0A2R8Y6U1 -CDS 5' incomplete
ENST00000643462.1RNASEH2B-21949147aaENSP00000496130.1
 
Nonsense mediated decay
-A0A2R8Y7A3 --
ENST00000645712.1RNASEH2B-2351254No protein-
 
Processed transcript
----
ENST00000495244.7RNASEH2B-205977No protein-
 
Processed transcript
---TSL:5
ENST00000459681.3RNASEH2B-203649No protein-
 
Processed transcript
---TSL:5
ENST00000646279.1RNASEH2B-2407282No protein-
 
Retained intron
----
ENST00000645549.1RNASEH2B-2334881No protein-
 
Retained intron
----
ENST00000613449.4RNASEH2B-2073328No protein-
 
Retained intron
---TSL:2
ENST00000645333.1RNASEH2B-2312196No protein-
 
Retained intron
----
ENST00000645201.1RNASEH2B-2302015No protein-
 
Retained intron
----
ENST00000465541.2RNASEH2B-2041952No protein-
 
Retained intron
---TSL:5
ENST00000644420.1RNASEH2B-2261885No protein-
 
Retained intron
----
ENST00000646964.1RNASEH2B-2451806No protein-
 
Retained intron
----
ENST00000621641.1RNASEH2B-209409No protein-
 
Retained intron
---TSL:3
Description

farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]

Gene Synonyms

FPTA, PGGT1A, PTAR2

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000302279.8FNTA-2011667379aaENSP00000303423.3
 
Protein coding
CCDS6140P49354-1 NM_002027.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000529687.5FNTA-2081950228aaENSP00000473479.1
 
Protein coding
-B3KVN2 -GENCODE basicTSL:2
ENST00000533336.1FNTA-210874249aaENSP00000434430.1
 
Protein coding
-E9PQP6 -TSL:3CDS 3' incomplete
ENST00000531266.5FNTA-209590196aaENSP00000432411.1
 
Protein coding
-H0YCW1 -TSL:5CDS 5' and 3' incomplete
ENST00000525699.5FNTA-20451660aaENSP00000436998.1
 
Protein coding
-E9PPM9 -TSL:5CDS 3' incomplete
ENST00000526755.5FNTA-205467667aaENSP00000437208.1
 
Nonsense mediated decay
-E9PK84 -TSL:1
ENST00000533383.5FNTA-21298267aaENSP00000435455.1
 
Nonsense mediated decay
-E9PK84 -TSL:5
ENST00000533998.5FNTA-214581117aaENSP00000432892.1
 
Nonsense mediated decay
-E9PN85 -TSL:3
ENST00000524546.5FNTA-202750No protein-
 
Processed transcript
---TSL:3
ENST00000527153.5FNTA-206582No protein-
 
Processed transcript
---TSL:3
ENST00000533559.5FNTA-213429No protein-
 
Processed transcript
---TSL:3
ENST00000525099.1FNTA-2037327No protein-
 
Retained intron
---TSL:2
ENST00000528400.1FNTA-207601No protein-
 
Retained intron
---TSL:2
ENST00000533368.1FNTA-211534No protein-
 
Retained intron
---TSL:2
Description

discs large MAGUK scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:2900]

Gene Synonyms

DLGH1, SAP-97, SAP97, dJ1061C18.1.1, hdlg

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000667157.1DLG1-2614853893aaENSP00000499414.1
 
Protein coding
CCDS87192Q12959-4 NM_001366207.1MANE Select v0.95Ensembl CanonicalGENCODE basic
ENST00000346964.6DLG1-2015034926aaENSP00000345731.2
 
Protein coding
CCDS3327Q12959-2 -GENCODE basicAPPRIS P3TSL:1
ENST00000357674.9DLG1-2024912893aaENSP00000350303.6
 
Protein coding
CCDS87192Q12959-4 -GENCODE basicTSL:1
ENST00000670455.1DLG1-2684693893aaENSP00000499542.1
 
Protein coding
CCDS87192Q12959-4 -GENCODE basic
ENST00000669565.1DLG1-2654574893aaENSP00000499413.1
 
Protein coding
CCDS87192Q12959-4 -GENCODE basic
ENST00000659221.1DLG1-2424524892aaENSP00000499269.1
 
Protein coding
CCDS75072A0A0C4DFT3 -GENCODE basic
ENST00000657381.1DLG1-2394436892aaENSP00000499507.1
 
Protein coding
CCDS75072A0A0C4DFT3 -GENCODE basic
ENST00000419354.5DLG1-2083994904aaENSP00000407531.1
 
Protein coding
CCDS43194Q12959-1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000670935.1DLG1-2693926904aaENSP00000499437.1
 
Protein coding
CCDS43194Q12959-1 -GENCODE basicAPPRIS ALT1
ENST00000661013.1DLG1-2483202892aaENSP00000499440.1
 
Protein coding
CCDS75072A0A0C4DFT3 -GENCODE basic
ENST00000452595.5DLG1-2173053788aaENSP00000398939.1
 
Protein coding
CCDS56300Q12959-8 -GENCODE basicTSL:2
ENST00000448528.6DLG1-2152977904aaENSP00000391732.2
 
Protein coding
CCDS43194Q12959-1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000656944.1DLG1-2372851892aaENSP00000499584.1
 
Protein coding
CCDS75072A0A0C4DFT3 -GENCODE basic
ENST00000450955.5DLG1-2162682893aaENSP00000411278.1
 
Protein coding
CCDS87192Q12959-4 -GENCODE basicTSL:5
ENST00000443183.5DLG1-2132516800aaENSP00000396658.1
 
Protein coding
CCDS56301Q12959-9 -GENCODE basicTSL:2
ENST00000654733.1DLG1-2325972772aaENSP00000499730.1
 
Protein coding
-A0A590UK81 --
ENST00000656428.1DLG1-2364971874aaENSP00000499329.1
 
Protein coding
-A0A590UJ81 -GENCODE basic
ENST00000655488.1DLG1-2344840871aaENSP00000499657.1
 
Protein coding
-Q12959-3 -GENCODE basic
ENST00000663148.1DLG1-2554695871aaENSP00000499384.1
 
Protein coding
-Q12959-3 -GENCODE basic
ENST00000661453.1DLG1-2524653871aaENSP00000499514.1
 
Protein coding
-Q12959-3 -GENCODE basic
ENST00000660898.1DLG1-2474649925aaENSP00000499363.1
 
Protein coding
-A0A590UJD9 -GENCODE basic
ENST00000658701.1DLG1-2414634878aaENSP00000499531.1
 
Protein coding
-A0A590UJR5 -GENCODE basic
ENST00000667104.1DLG1-2604589865aaENSP00000499313.1
 
Protein coding
-A0A590UJ68 -GENCODE basic
ENST00000661336.1DLG1-2504534875aaENSP00000499229.1
 
Protein coding
-A0A590UJ08 -GENCODE basic
ENST00000671185.1DLG1-2704513871aaENSP00000499580.1
 
Protein coding
-Q12959-3 -GENCODE basic
ENST00000656087.1DLG1-2354500883aaENSP00000499723.1
 
Protein coding
-A0A590UKA8 -GENCODE basic
ENST00000653795.1DLG1-2314337833aaENSP00000499599.1
 
Protein coding
-A0A590UJX2 -GENCODE basic
ENST00000654737.1DLG1-2334335839aaENSP00000499578.1
 
Protein coding
-A0A590UJS9 -GENCODE basic
ENST00000659716.1DLG1-2434272871aaENSP00000499602.1
 
Protein coding
-Q12959-3 -GENCODE basic
ENST00000671246.1DLG1-2714146821aaENSP00000499692.1
 
Protein coding
-A0A590UK48 -GENCODE basic
ENST00000660553.1DLG1-2463962819aaENSP00000499559.1
 
Protein coding
-A0A590UJR4 -GENCODE basic
ENST00000664991.1DLG1-2573795868aaENSP00000499250.1
 
Protein coding
-A0A590UJ18 -GENCODE basic
ENST00000667971.1DLG1-2623774879aaENSP00000499347.1
 
Protein coding
-A0A590UJC5 -GENCODE basic
ENST00000666007.1DLG1-2593389853aaENSP00000499793.1
 
Protein coding
-Q12959-5 -GENCODE basic
ENST00000662727.1DLG1-2543321883aaENSP00000499774.1
 
Protein coding
-A0A590UKA8 -GENCODE basic
ENST00000658155.1DLG1-2403095744aaENSP00000499257.1
 
Protein coding
-A0A590UJ29 -GENCODE basic
ENST00000422288.6DLG1-2102912853aaENSP00000413238.1
 
Protein coding
-Q12959-5 -GENCODE basicTSL:5
ENST00000392382.6DLG1-2052690871aaENSP00000376187.2
 
Protein coding
-Q12959-3 -GENCODE basicTSL:5
ENST00000436682.6DLG1-2122407551aaENSP00000393771.2
 
Protein coding
-C9JUA9 -GENCODE basicTSL:2
ENST00000661808.1DLG1-2531745375aaENSP00000499637.1
 
Protein coding
-A0A590UJZ4 -GENCODE basic
ENST00000447466.1DLG1-214858286aaENSP00000398702.1
 
Protein coding
-H7C166 -TSL:1CDS 5' and 3' incomplete
ENST00000392380.6DLG1-203716208aaENSP00000376185.2
 
Protein coding
-A8MUT6 -TSL:3CDS 3' incomplete
ENST00000412364.2DLG1-206710106aaENSP00000390403.1
 
Protein coding
-F2Z2L0 -TSL:2CDS 3' incomplete
ENST00000456699.6DLG1-219629179aaENSP00000396474.2
 
Protein coding
-C9JCP6 -TSL:3CDS 3' incomplete
ENST00000453607.5DLG1-218539122aaENSP00000412579.1
 
Protein coding
-C9IYP1 -TSL:4CDS 3' incomplete
ENST00000434148.1DLG1-21130935aaENSP00000400169.1
 
Protein coding
-C9J110 -TSL:3CDS 3' incomplete
ENST00000669714.1DLG1-2665455311aaENSP00000499698.1
 
Nonsense mediated decay
-A0A590UK52 --
ENST00000660432.1DLG1-2454577118aaENSP00000499677.1
 
Nonsense mediated decay
-A0A590UJE6 --
ENST00000664564.1DLG1-2564550300aaENSP00000499320.1
 
Nonsense mediated decay
-A0A590UJ95 --
ENST00000665728.1DLG1-2584543181aaENSP00000499682.1
 
Nonsense mediated decay
-A0A590UK13 --
ENST00000670366.1DLG1-2674382186aaENSP00000499310.1
 
Nonsense mediated decay
-A0A590UJ86 --
ENST00000669332.1DLG1-2644357575aaENSP00000499499.1
 
Nonsense mediated decay
-A0A590UJL2 --
ENST00000653331.1DLG1-2294223587aaENSP00000499752.1
 
Nonsense mediated decay
-A0A590UK70 --
ENST00000661440.1DLG1-2513920118aaENSP00000499381.1
 
Nonsense mediated decay
-A0A590UJE6 --
ENST00000661229.1DLG1-2493100689aaENSP00000499280.1
 
Nonsense mediated decay
-A0A590UJ64 -CDS 5' incomplete
ENST00000660237.1DLG1-2443015122aaENSP00000499707.1
 
Nonsense mediated decay
-A0A590UK31 -CDS 5' incomplete
ENST00000657098.1DLG1-2382998570aaENSP00000499247.1
 
Nonsense mediated decay
-A0A590UJ25 --
ENST00000392381.7DLG1-2042833658aaENSP00000376186.3
 
Nonsense mediated decay
-E7EQD7 -TSL:1
ENST00000469073.2DLG1-2202461628aaENSP00000499640.1
 
Nonsense mediated decay
-A0A590UK02 -TSL:4
ENST00000419227.5DLG1-2071771370aaENSP00000396768.1
 
Nonsense mediated decay
-B4E2H8 -TSL:2
ENST00000419553.6DLG1-2091313250aaENSP00000414189.2
 
Nonsense mediated decay
-C9JN61 -TSL:2CDS 5' incomplete
ENST00000653583.1DLG1-2303968No protein-
 
Processed transcript
----
ENST00000668578.1DLG1-2633429No protein-
 
Processed transcript
----
ENST00000485409.5DLG1-226656No protein-
 
Processed transcript
---TSL:3
ENST00000493937.1DLG1-228207No protein-
 
Processed transcript
---TSL:3
ENST00000469371.5DLG1-2214046No protein-
 
Retained intron
---TSL:2
ENST00000471733.5DLG1-2232605No protein-
 
Retained intron
---TSL:1
ENST00000475394.5DLG1-224864No protein-
 
Retained intron
---TSL:5
ENST00000477312.1DLG1-225732No protein-
 
Retained intron
---TSL:3
ENST00000486877.1DLG1-227479No protein-
 
Retained intron
---TSL:2
ENST00000470629.1DLG1-222416No protein-
 
Retained intron
---TSL:3
Description

inverted formin 2 [Source:HGNC Symbol;Acc:HGNC:23791]

Gene Synonyms

C14orf151, C14orf173, MGC13251

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000392634.9INF2-20376231249aaENSP00000376410.4
 
Protein coding
CCDS9989Q27J81-1 NM_022489.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:5
ENST00000330634.11INF2-20275781240aaENSP00000376406.3
 
Protein coding
CCDS45173Q27J81-2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000398337.8INF2-2041689234aaENSP00000381380.4
 
Protein coding
CCDS41999Q27J81-3 -GENCODE basicTSL:1
ENST00000675207.1INF2-22777321281aaENSP00000502644.1
 
Protein coding
-A0A6Q8PHA2 -GENCODE basicAPPRIS ALT2
ENST00000675638.1INF2-23874111222aaENSP00000501647.1
 
Protein coding
-A0A6Q8PF44 -GENCODE basicAPPRIS ALT2
ENST00000675980.1INF2-24537681255aaENSP00000502520.1
 
Protein coding
-A0A6Q8PH71 -GENCODE basicAPPRIS ALT2
ENST00000675481.1INF2-23237541250aaENSP00000502723.1
 
Protein coding
-A0A6Q8PHG2 -GENCODE basicAPPRIS ALT2
ENST00000675329.1INF2-23037261241aaENSP00000502287.1
 
Protein coding
-A0A6Q8PGN3 -GENCODE basic
ENST00000674991.1INF2-2242944981aaENSP00000502004.1
 
Protein coding
-A0A6Q8PFW4 -CDS 3' incomplete
ENST00000674631.1INF2-2132200614aaENSP00000502830.1
 
Protein coding
-A0A6Q8PHS8 -CDS 5' incomplete
ENST00000675482.1INF2-2331020130aaENSP00000501798.1
 
Protein coding
-A0A6Q8PEY8 -CDS 3' incomplete
ENST00000674723.1INF2-216931130aaENSP00000502257.1
 
Protein coding
-A0A6Q8PEY8 -CDS 3' incomplete
ENST00000676427.1INF2-250883130aaENSP00000502106.1
 
Protein coding
-A0A6Q8PEY8 -CDS 3' incomplete
ENST00000674869.1INF2-221837130aaENSP00000501558.1
 
Protein coding
-A0A6Q8PEY8 -CDS 3' incomplete
ENST00000674602.1INF2-212806269aaENSP00000502304.1
 
Protein coding
-A0A6Q8PGK9 -CDS 5' and 3' incomplete
ENST00000617571.5INF2-21045561048aaENSP00000483829.2
 
Nonsense mediated decay
-A0A087X118 -TSL:1
ENST00000674757.1INF2-21737561051aaENSP00000502202.1
 
Nonsense mediated decay
-A0A6Q8PGC7 --
ENST00000674662.1INF2-2143755776aaENSP00000501895.1
 
Nonsense mediated decay
-A0A6Q8PFN5 --
ENST00000675809.1INF2-2433749793aaENSP00000502587.1
 
Nonsense mediated decay
-A0A6Q8PH59 --
ENST00000674520.1INF2-2113689878aaENSP00000502593.1
 
Nonsense mediated decay
-A0A6Q8PH63 --
ENST00000674846.1INF2-2193689773aaENSP00000502431.1
 
Nonsense mediated decay
-A0A6Q8PGU8 --
ENST00000674857.1INF2-2203683194aaENSP00000501687.1
 
Nonsense mediated decay
-A0A6Q8PF91 --
ENST00000675930.1INF2-24436391160aaENSP00000502456.1
 
Nonsense mediated decay
-A0A6Q8PH25 --
ENST00000675724.1INF2-2393632646aaENSP00000502576.1
 
Nonsense mediated decay
-A0A6Q8PH52 --
ENST00000675583.1INF2-2353623751aaENSP00000501740.1
 
Nonsense mediated decay
-A0A6Q8PFB9 --
ENST00000676016.1INF2-2463593741aaENSP00000502412.1
 
Nonsense mediated decay
-A0A6Q8PGY8 --
ENST00000674822.1INF2-2183578159aaENSP00000501552.1
 
Nonsense mediated decay
-A0A6Q8PEY5 --
ENST00000676366.1INF2-24935581133aaENSP00000501605.1
 
Nonsense mediated decay
-A0A6Q8PF29 --
ENST00000674960.1INF2-2223552316aaENSP00000501841.1
 
Nonsense mediated decay
-A0A6Q8PFJ1 --
ENST00000675797.1INF2-2423099358aaENSP00000502023.1
 
Nonsense mediated decay
-A0A6Q8PFY4 --
ENST00000252527.8INF2-2013050717aaENSP00000252527.8
 
Nonsense mediated decay
-A0A0A0MQU1 -TSL:2CDS 5' incomplete
ENST00000674994.1INF2-2253006230aaENSP00000502442.1
 
Nonsense mediated decay
-A0A6Q8PGX4 --
ENST00000675771.1INF2-2412957332aaENSP00000502104.1
 
Nonsense mediated decay
-A0A6Q8PG64 --
ENST00000675424.1INF2-231105118aaENSP00000502293.1
 
Nonsense mediated decay
-A0A6Q8PGJ8 -CDS 5' incomplete
ENST00000674686.1INF2-21596718aaENSP00000502757.1
 
Nonsense mediated decay
-A0A6Q8PGJ8 -CDS 5' incomplete
ENST00000540171.2INF2-2091307No protein-
 
Processed transcript
---TSL:1
ENST00000481338.1INF2-2081102No protein-
 
Processed transcript
---TSL:2
ENST00000675603.1INF2-236934No protein-
 
Processed transcript
----
ENST00000674966.1INF2-223859No protein-
 
Processed transcript
----
ENST00000675743.1INF2-240648No protein-
 
Processed transcript
----
ENST00000675248.1INF2-228577No protein-
 
Processed transcript
----
ENST00000676100.1INF2-247528No protein-
 
Processed transcript
----
ENST00000675313.1INF2-229432No protein-
 
Processed transcript
----
ENST00000675616.1INF2-237431No protein-
 
Processed transcript
----
ENST00000676134.1INF2-248382No protein-
 
Processed transcript
----
ENST00000675029.1INF2-2261692No protein-
 
Retained intron
----
ENST00000474229.1INF2-205947No protein-
 
Retained intron
---TSL:3
ENST00000480763.2INF2-207581No protein-
 
Retained intron
---TSL:3
ENST00000675557.1INF2-234547No protein-
 
Retained intron
----
ENST00000477497.1INF2-206545No protein-
 
Retained intron
---TSL:3
Description

interacts with SUPT6H, CTD assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:25467]

Gene Synonyms

DKFZp761G0123, FLJ10006, FLJ14655, FLJ32319

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000295321.9IWS1-2012973819aaENSP00000295321.4
 
Protein coding
CCDS2146Q96ST2-1 NM_017969.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000409725.1IWS1-2021080292aaENSP00000387206.1
 
Protein coding
-B8ZZB6 -TSL:2CDS 3' incomplete
ENST00000637187.1IWS1-2121021207aaENSP00000490836.1
 
Protein coding
-A0A1B0GW95 -TSL:5CDS 5' incomplete
ENST00000412979.1IWS1-20344133aaENSP00000396710.1
 
Nonsense mediated decay
-H7C0U1 -TSL:3CDS 5' incomplete
ENST00000486662.1IWS1-209870No protein-
 
Processed transcript
---TSL:1
ENST00000495369.1IWS1-210811No protein-
 
Processed transcript
---TSL:2
ENST00000436740.1IWS1-204608No protein-
 
Processed transcript
---TSL:3
ENST00000460511.5IWS1-205598No protein-
 
Processed transcript
---TSL:4
ENST00000483889.5IWS1-208588No protein-
 
Processed transcript
---TSL:3
ENST00000479083.1IWS1-207582No protein-
 
Processed transcript
---TSL:2
ENST00000478949.1IWS1-206567No protein-
 
Processed transcript
---TSL:4
ENST00000497888.1IWS1-211592No protein-
 
Retained intron
---TSL:2
Description

cytotoxic granule-associated RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:107914]

Gene Synonyms

2310050N03Rik, mTIA-1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000095753.9Tia1-2024477386aaENSMUSP00000093425.3
 
Protein coding
CCDS20312P52912 Q564E7 GENCODE basicAPPRIS P3TSL:1
ENSMUST00000113713.9Tia1-2063108377aaENSMUSP00000109342.3
 
Protein coding
CCDS51834Q80ZW7 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000130967.8Tia1-2111445285aaENSMUSP00000118558.2
 
Protein coding
CCDS51833Q8CII5 GENCODE basicTSL:1
ENSMUST00000095752.9Tia1-2013130375aaENSMUSP00000093424.3
 
Protein coding
-G5E8L2 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000095754.10Tia1-2031789385aaENSMUSP00000093426.4
 
Protein coding
-D3Z4H6 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000113712.10Tia1-2054326212aaENSMUSP00000138652.2
 
Nonsense mediated decay
-D3YY02 TSL:5
ENSMUST00000154438.8Tia1-221129093aaENSMUSP00000145218.2
 
Nonsense mediated decay
-A0A0N4SVR8 TSL:5
ENSMUST00000148728.8Tia1-2181203133aaENSMUSP00000144857.2
 
Nonsense mediated decay
-A0A0N4SUX1 TSL:5
ENSMUST00000123267.3Tia1-208597105aaENSMUSP00000145407.2
 
Nonsense mediated decay
-A0A0N4SW78 TSL:3CDS 5' incomplete
ENSMUST00000156762.8Tia1-223797No protein-
 
Processed transcript
--TSL:5
ENSMUST00000124683.8Tia1-209750No protein-
 
Processed transcript
--TSL:5
ENSMUST00000147104.8Tia1-217706No protein-
 
Processed transcript
--TSL:5
ENSMUST00000139928.8Tia1-214612No protein-
 
Processed transcript
--TSL:3
ENSMUST00000154983.2Tia1-222422No protein-
 
Processed transcript
--TSL:1
ENSMUST00000141960.2Tia1-2154420No protein-
 
Retained intron
--TSL:1
ENSMUST00000134142.8Tia1-2123856No protein-
 
Retained intron
--TSL:1
ENSMUST00000205024.2Tia1-2272660No protein-
 
Retained intron
--TSL:NA
ENSMUST00000203546.2Tia1-2252654No protein-
 
Retained intron
--TSL:NA
ENSMUST00000136387.2Tia1-2132024No protein-
 
Retained intron
--TSL:1
ENSMUST00000143718.8Tia1-2161178No protein-
 
Retained intron
--TSL:2
ENSMUST00000203206.2Tia1-224935No protein-
 
Retained intron
--TSL:NA
ENSMUST00000126404.6Tia1-210877No protein-
 
Retained intron
--TSL:5
ENSMUST00000149270.4Tia1-219864No protein-
 
Retained intron
--TSL:5
ENSMUST00000113708.4Tia1-204823No protein-
 
Retained intron
--TSL:2
ENSMUST00000203763.2Tia1-226759No protein-
 
Retained intron
--TSL:3
ENSMUST00000205109.2Tia1-228716No protein-
 
Retained intron
--TSL:3
ENSMUST00000123002.2Tia1-207628No protein-
 
Retained intron
--TSL:3
ENSMUST00000152852.2Tia1-220585No protein-
 
Retained intron
--TSL:3
Description

intraflagellar transport 122 [Source:MGI Symbol;Acc:MGI:1932386]

Gene Synonyms

C86139, Wdr10, sopb

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000112925.8Ift122-20341221182aaENSMUSP00000108547.2
 
Protein coding
CCDS51880Q6NWV3-1 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000038234.13Ift122-20140561183aaENSMUSP00000045468.7
 
Protein coding
CCDS20445Q6NWV3-2 GENCODE basicAPPRIS P3TSL:1
ENSMUST00000112923.7Ift122-20237651241aaENSMUSP00000108545.3
 
Protein coding
-E9Q9G8 GENCODE basicTSL:5
ENSMUST00000141305.8Ift122-2074444209aaENSMUSP00000138535.2
 
Nonsense mediated decay
-S4R282 TSL:1
ENSMUST00000124283.8Ift122-2042519No protein-
 
Processed transcript
--TSL:1
ENSMUST00000149083.8Ift122-209777No protein-
 
Processed transcript
--TSL:3
ENSMUST00000138113.2Ift122-206618No protein-
 
Processed transcript
--TSL:3
ENSMUST00000125889.2Ift122-205504No protein-
 
Processed transcript
--TSL:3
ENSMUST00000155565.2Ift122-2114267No protein-
 
Retained intron
--TSL:1
ENSMUST00000203243.2Ift122-2122491No protein-
 
Retained intron
--TSL:NA
ENSMUST00000146950.8Ift122-208585No protein-
 
Retained intron
--TSL:3
ENSMUST00000152092.2Ift122-210338No protein-
 
Retained intron
--TSL:3
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000626948.3SOX2-OT-2401584No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
ENST00000656613.1SOX2-OT-2924289No protein-
 
lncRNA
--GENCODE basic
ENST00000670501.1SOX2-OT-3024282No protein-
 
lncRNA
---
ENST00000665187.1SOX2-OT-2984263No protein-
 
lncRNA
--GENCODE basic
ENST00000671456.1SOX2-OT-3034240No protein-
 
lncRNA
---
ENST00000657986.1SOX2-OT-2934162No protein-
 
lncRNA
---
ENST00000646698.1SOX2-OT-2824109No protein-
 
lncRNA
---
ENST00000660576.1SOX2-OT-2944101No protein-
 
lncRNA
---
ENST00000600801.7SOX2-OT-2344085No protein-
 
lncRNA
--TSL:5
ENST00000661842.1SOX2-OT-2954077No protein-
 
lncRNA
---
ENST00000654649.1SOX2-OT-2914032No protein-
 
lncRNA
---
ENST00000596250.7SOX2-OT-2253985No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000498731.6SOX2-OT-2183964No protein-
 
lncRNA
--TSL:1
ENST00000645583.2SOX2-OT-2753870No protein-
 
lncRNA
---
ENST00000646841.2SOX2-OT-2843868No protein-
 
lncRNA
---
ENST00000654538.1SOX2-OT-2903844No protein-
 
lncRNA
--GENCODE basic
ENST00000665033.1SOX2-OT-2963529No protein-
 
lncRNA
---
ENST00000665112.1SOX2-OT-2973462No protein-
 
lncRNA
---
ENST00000647055.1SOX2-OT-2873274No protein-
 
lncRNA
--GENCODE basic
ENST00000476964.6SOX2-OT-2073226No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000647034.2SOX2-OT-2863006No protein-
 
lncRNA
--GENCODE basic
ENST00000493116.6SOX2-OT-2142779No protein-
 
lncRNA
--TSL:4
ENST00000643236.2SOX2-OT-2672454No protein-
 
lncRNA
--GENCODE basic
ENST00000665485.1SOX2-OT-2992297No protein-
 
lncRNA
--GENCODE basic
ENST00000642685.1SOX2-OT-2632276No protein-
 
lncRNA
--GENCODE basic
ENST00000642301.2SOX2-OT-2602271No protein-
 
lncRNA
--GENCODE basic
ENST00000492337.6SOX2-OT-2132184No protein-
 
lncRNA
--TSL:2
ENST00000667332.1SOX2-OT-3002112No protein-
 
lncRNA
---
ENST00000646296.2SOX2-OT-2792094No protein-
 
lncRNA
---
ENST00000642652.2SOX2-OT-2622042No protein-
 
lncRNA
--GENCODE basic
ENST00000646949.2SOX2-OT-2851980No protein-
 
lncRNA
--GENCODE basic
ENST00000643769.1SOX2-OT-2691967No protein-
 
lncRNA
--GENCODE basic
ENST00000644582.1SOX2-OT-2721884No protein-
 
lncRNA
--GENCODE basic
ENST00000466034.7SOX2-OT-2031772No protein-
 
lncRNA
--TSL:1
ENST00000646683.1SOX2-OT-2811766No protein-
 
lncRNA
--GENCODE basic
ENST00000644358.1SOX2-OT-2711703No protein-
 
lncRNA
--GENCODE basic
ENST00000628810.2SOX2-OT-2481675No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000643667.1SOX2-OT-2681622No protein-
 
lncRNA
---
ENST00000645423.2SOX2-OT-2741583No protein-
 
lncRNA
---
ENST00000642218.1SOX2-OT-2591500No protein-
 
lncRNA
--GENCODE basic
ENST00000642922.1SOX2-OT-2651468No protein-
 
lncRNA
--GENCODE basic
ENST00000642823.1SOX2-OT-2641444No protein-
 
lncRNA
--GENCODE basic
ENST00000626299.4SOX2-OT-2371412No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000646508.1SOX2-OT-2801390No protein-
 
lncRNA
--GENCODE basic
ENST00000597347.5SOX2-OT-2261342No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000690586.1SOX2-OT-3131327No protein-
 
lncRNA
--GENCODE basic
ENST00000642429.1SOX2-OT-2611279No protein-
 
lncRNA
---
ENST00000644732.1SOX2-OT-2731242No protein-
 
lncRNA
---
ENST00000691318.1SOX2-OT-3141240No protein-
 
lncRNA
---
ENST00000493521.5SOX2-OT-2151239No protein-
 
lncRNA
--TSL:3
ENST00000647552.1SOX2-OT-2891238No protein-
 
lncRNA
---
ENST00000645960.1SOX2-OT-2761199No protein-
 
lncRNA
---
ENST00000485035.3SOX2-OT-2091162No protein-
 
lncRNA
--TSL:4
ENST00000644304.1SOX2-OT-2701115No protein-
 
lncRNA
---
ENST00000643131.2SOX2-OT-2661097No protein-
 
lncRNA
---
ENST00000647179.1SOX2-OT-2881068No protein-
 
lncRNA
---
ENST00000693669.1SOX2-OT-3151055No protein-
 
lncRNA
---
ENST00000491282.6SOX2-OT-2121040No protein-
 
lncRNA
--TSL:1
ENST00000627501.4SOX2-OT-2411036No protein-
 
lncRNA
--TSL:5
ENST00000630482.2SOX2-OT-2551012No protein-
 
lncRNA
--TSL:5
ENST00000646712.1SOX2-OT-283989No protein-
 
lncRNA
---
ENST00000476125.5SOX2-OT-206979No protein-
 
lncRNA
--TSL:3
ENST00000631025.2SOX2-OT-258954No protein-
 
lncRNA
--TSL:5
ENST00000630553.1SOX2-OT-256905No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000477928.1SOX2-OT-208902No protein-
 
lncRNA
--TSL:2
ENST00000627530.3SOX2-OT-242873No protein-
 
lncRNA
--TSL:5
ENST00000597828.5SOX2-OT-228864No protein-
 
lncRNA
--TSL:5
ENST00000685767.1SOX2-OT-306859No protein-
 
lncRNA
---
ENST00000595084.3SOX2-OT-222850No protein-
 
lncRNA
--TSL:5
ENST00000628211.2SOX2-OT-244847No protein-
 
lncRNA
--TSL:5
ENST00000599082.2SOX2-OT-231836No protein-
 
lncRNA
--TSL:5
ENST00000685509.1SOX2-OT-305831No protein-
 
lncRNA
---
ENST00000629781.4SOX2-OT-252818No protein-
 
lncRNA
--TSL:5
ENST00000628496.3SOX2-OT-247798No protein-
 
lncRNA
--TSL:5
ENST00000646056.1SOX2-OT-278796No protein-
 
lncRNA
---
ENST00000686782.1SOX2-OT-308794No protein-
 
lncRNA
---
ENST00000688647.1SOX2-OT-310792No protein-
 
lncRNA
---
ENST00000600386.6SOX2-OT-232789No protein-
 
lncRNA
--TSL:5
ENST00000629112.4SOX2-OT-249782No protein-
 
lncRNA
--TSL:5
ENST00000600778.3SOX2-OT-233762No protein-
 
lncRNA
--TSL:5
ENST00000593549.6SOX2-OT-220753No protein-
 
lncRNA
--TSL:5
ENST00000487240.3SOX2-OT-210751No protein-
 
lncRNA
--TSL:5
ENST00000630887.3SOX2-OT-257745No protein-
 
lncRNA
--TSL:5
ENST00000628343.3SOX2-OT-245743No protein-
 
lncRNA
--TSL:5
ENST00000626802.2SOX2-OT-239737No protein-
 
lncRNA
--TSL:5
ENST00000595313.5SOX2-OT-224716No protein-
 
lncRNA
--TSL:5
ENST00000689495.1SOX2-OT-311705No protein-
 
lncRNA
---
ENST00000685088.1SOX2-OT-304694No protein-
 
lncRNA
---
ENST00000627738.1SOX2-OT-243692No protein-
 
lncRNA
--TSL:5
ENST00000686214.1SOX2-OT-307679No protein-
 
lncRNA
---
ENST00000629830.3SOX2-OT-253677No protein-
 
lncRNA
--TSL:5
ENST00000594942.5SOX2-OT-221675No protein-
 
lncRNA
--TSL:5
ENST00000668295.2SOX2-OT-301671No protein-
 
lncRNA
---
ENST00000626619.2SOX2-OT-238660No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630150.2SOX2-OT-254649No protein-
 
lncRNA
--TSL:5
ENST00000597651.6SOX2-OT-227626No protein-
 
lncRNA
--TSL:5
ENST00000693697.1SOX2-OT-316610No protein-
 
lncRNA
---
ENST00000460739.5SOX2-OT-201609No protein-
 
lncRNA
--TSL:4
ENST00000689942.1SOX2-OT-312585No protein-
 
lncRNA
---
ENST00000595287.1SOX2-OT-223581No protein-
 
lncRNA
--TSL:5
ENST00000497122.5SOX2-OT-216578No protein-
 
lncRNA
--TSL:4
ENST00000629273.2SOX2-OT-250575No protein-
 
lncRNA
--TSL:5
ENST00000629552.2SOX2-OT-251572No protein-
 
lncRNA
--TSL:5
ENST00000687464.1SOX2-OT-309569No protein-
 
lncRNA
---
ENST00000461063.6SOX2-OT-202566No protein-
 
lncRNA
--TSL:3
ENST00000469278.5SOX2-OT-204561No protein-
 
lncRNA
--TSL:4
ENST00000498226.5SOX2-OT-217560No protein-
 
lncRNA
--TSL:4
ENST00000598474.4SOX2-OT-229512No protein-
 
lncRNA
--TSL:5
ENST00000625581.2SOX2-OT-236495No protein-
 
lncRNA
--TSL:5
ENST00000600962.6SOX2-OT-235469No protein-
 
lncRNA
--TSL:5
ENST00000593330.1SOX2-OT-219468No protein-
 
lncRNA
--TSL:3
ENST00000472856.1SOX2-OT-205454No protein-
 
lncRNA
--TSL:2
ENST00000628347.1SOX2-OT-246445No protein-
 
lncRNA
--TSL:5
ENST00000645983.1SOX2-OT-277392No protein-
 
lncRNA
---
ENST00000490005.2SOX2-OT-211383No protein-
 
lncRNA
--TSL:2
ENST00000598867.1SOX2-OT-230348No protein-
 
lncRNA
--TSL:5
Statistics

Exons: 7, Coding exons: 0, Transcript length: 4,282 bps,

Version

ENST00000670501.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x320d96a8)