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EnsemblEnsembl Home
Description

solute carrier family 35, member C2 [Source:MGI Symbol;Acc:MGI:2385166]

Gene Synonyms

CGI-15, D2Wsu58e, Ovcov1

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000109300.9Slc35c2-2042008364aaENSMUSP00000104923.3
 
Protein coding
CCDS17074Q5GMH2 Q8VCX2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000109298.8Slc35c2-2021991364aaENSMUSP00000104921.2
 
Protein coding
CCDS17074Q5GMH2 Q8VCX2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000109299.8Slc35c2-2031926364aaENSMUSP00000104922.2
 
Protein coding
CCDS17074Q5GMH2 Q8VCX2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000017808.14Slc35c2-2011843364aaENSMUSP00000017808.8
 
Protein coding
CCDS17074Q5GMH2 Q8VCX2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000133961.8Slc35c2-211862192aaENSMUSP00000118227.2
 
Protein coding
-Q5GMG8 TSL:3CDS 3' incomplete
ENSMUST00000155289.8Slc35c2-215830199aaENSMUSP00000119071.2
 
Protein coding
-Q5GMH1 TSL:5CDS 3' incomplete
ENSMUST00000156134.8Slc35c2-216796192aaENSMUSP00000116288.2
 
Protein coding
-Q5GMG8 TSL:2CDS 3' incomplete
ENSMUST00000129210.8Slc35c2-206728163aaENSMUSP00000118605.2
 
Protein coding
-Q5GMG7 TSL:5CDS 3' incomplete
ENSMUST00000131409.2Slc35c2-209690137aaENSMUSP00000120036.2
 
Protein coding
-A2A5A3 TSL:3CDS 3' incomplete
ENSMUST00000129336.8Slc35c2-207588196aaENSMUSP00000123299.2
 
Protein coding
-Q5GMG9 TSL:5CDS 3' incomplete
ENSMUST00000130393.2Slc35c2-20837658aaENSMUSP00000123450.2
 
Protein coding
-Q5GMG6 TSL:3CDS 3' incomplete
ENSMUST00000132270.8Slc35c2-210189272aaENSMUSP00000125708.2
 
Nonsense mediated decay
-E0CYZ1 TSL:1
ENSMUST00000145301.8Slc35c2-21278672aaENSMUSP00000123757.2
 
Nonsense mediated decay
-E0CYZ1 TSL:5
ENSMUST00000147247.2Slc35c2-2132042No protein-
 
Retained intron
--TSL:2
ENSMUST00000125550.2Slc35c2-2051110No protein-
 
Retained intron
--TSL:1
ENSMUST00000154608.8Slc35c2-214775No protein-
 
Retained intron
--TSL:5
Description

spermatogenesis associated 7 [Source:HGNC Symbol;Acc:HGNC:20423]

Gene Synonyms

HSD3, LCA3

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000393545.9SPATA7-2032000599aaENSP00000377176.4
 
Protein coding
CCDS9883Q9P0W8-1 NM_018418.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000556553.5SPATA7-2172301567aaENSP00000451128.1
 
Protein coding
CCDS32132Q9P0W8-2 -GENCODE basicTSL:1
ENST00000356583.9SPATA7-2021891567aaENSP00000348991.5
 
Protein coding
CCDS32132Q9P0W8-2 -GENCODE basicTSL:1
ENST00000045347.11SPATA7-2011410458aaENSP00000045347.7
 
Protein coding
-Q9P0W8-3 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000553885.5SPATA7-206805228aaENSP00000450606.1
 
Protein coding
-G3V2E1 -TSL:3CDS 3' incomplete
ENST00000556406.5SPATA7-21675891aaENSP00000450809.1
 
Protein coding
-H0YJ48 -TSL:3CDS 5' incomplete
ENST00000555401.5SPATA7-212545138aaENSP00000452435.1
 
Protein coding
-G3V5N2 -TSL:3CDS 3' incomplete
ENST00000554802.1SPATA7-21040176aaENSP00000451019.1
 
Protein coding
-H0YJ93 -TSL:3CDS 5' incomplete
ENST00000555515.5SPATA7-213108881aaENSP00000450882.1
 
Nonsense mediated decay
-G3V2V4 -TSL:3
ENST00000555534.5SPATA7-21489085aaENSP00000450515.1
 
Nonsense mediated decay
-G3V287 -TSL:3
ENST00000557248.5SPATA7-22080486aaENSP00000451690.1
 
Nonsense mediated decay
-G3V4A9 -TSL:3
ENST00000556870.5SPATA7-21978653aaENSP00000452359.1
 
Nonsense mediated decay
-G3V5H6 -TSL:3
ENST00000553908.5SPATA7-20776149aaENSP00000452546.1
 
Nonsense mediated decay
-G3V5V8 -TSL:5
ENST00000554168.5SPATA7-20965146aaENSP00000451663.1
 
Nonsense mediated decay
-G3V491 -TSL:4
ENST00000555356.5SPATA7-21159246aaENSP00000450654.1
 
Nonsense mediated decay
-G3V491 -TSL:4
ENST00000557724.5SPATA7-22256846aaENSP00000452364.1
 
Nonsense mediated decay
-G3V491 -TSL:4
ENST00000555715.5SPATA7-21554542aaENSP00000451181.1
 
Nonsense mediated decay
-G3V3D2 -TSL:4
ENST00000554102.5SPATA7-208501No protein-
 
Processed transcript
---TSL:3
ENST00000553626.5SPATA7-2053610No protein-
 
Retained intron
---TSL:2
ENST00000556666.5SPATA7-2182380No protein-
 
Retained intron
---TSL:2
ENST00000553303.1SPATA7-204885No protein-
 
Retained intron
---TSL:2
ENST00000557567.1SPATA7-221457No protein-
 
Retained intron
---TSL:3
Description

pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]

Gene Synonyms

TAPP1

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000368990.8PLEKHA1-2033741404aaENSP00000357986.3
 
Protein coding
CCDS7629Q9HB21-1 NM_001001974.4MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:1
ENST00000368988.5PLEKHA1-2013872334aaENSP00000357984.2
 
Protein coding
CCDS55730Q9HB21-2 -GENCODE basicTSL:5
ENST00000368989.6PLEKHA1-2023771383aaENSP00000357985.1
 
Protein coding
CCDS81517Q5RGS4 -GENCODE basicAPPRIS P1TSL:5
ENST00000433307.2PLEKHA1-2053704404aaENSP00000394416.1
 
Protein coding
CCDS7629Q9HB21-1 -GENCODE basicTSL:1
ENST00000392799.7PLEKHA1-2043221404aaENSP00000376547.3
 
Protein coding
CCDS7629Q9HB21-1 -GENCODE basicTSL:1
ENST00000463663.6PLEKHA1-206617133aaENSP00000473424.1
 
Protein coding
-R4GMZ9 -TSL:5CDS 3' incomplete
ENST00000494222.5PLEKHA1-208603No protein-
 
Processed transcript
---TSL:3
ENST00000481451.1PLEKHA1-2078619No protein-
 
Retained intron
---TSL:2
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000651587.1PVT1-2242444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000660438.1PVT1-2932450No protein-
 
lncRNA
--GENCODE basic
ENST00000523068.2PVT1-2162255No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000664995.1PVT1-3232230No protein-
 
lncRNA
--GENCODE basic
ENST00000659106.1PVT1-2832187No protein-
 
lncRNA
---
ENST00000660631.1PVT1-2952161No protein-
 
lncRNA
---
ENST00000657449.1PVT1-2652149No protein-
 
lncRNA
--GENCODE basic
ENST00000667418.1PVT1-3472143No protein-
 
lncRNA
--GENCODE basic
ENST00000666147.1PVT1-3362097No protein-
 
lncRNA
---
ENST00000656693.1PVT1-2541990No protein-
 
lncRNA
--GENCODE basic
ENST00000668098.1PVT1-3511985No protein-
 
lncRNA
---
ENST00000665856.1PVT1-3311965No protein-
 
lncRNA
--GENCODE basic
ENST00000656532.1PVT1-2531909No protein-
 
lncRNA
---
ENST00000670532.1PVT1-3681840No protein-
 
lncRNA
--GENCODE basic
ENST00000660456.1PVT1-2941814No protein-
 
lncRNA
---
ENST00000670714.1PVT1-3721756No protein-
 
lncRNA
---
ENST00000659912.1PVT1-2881744No protein-
 
lncRNA
---
ENST00000658840.1PVT1-2821738No protein-
 
lncRNA
--GENCODE basic
ENST00000662413.1PVT1-3081727No protein-
 
lncRNA
---
ENST00000664265.1PVT1-3171720No protein-
 
lncRNA
--GENCODE basic
ENST00000659326.1PVT1-2841706No protein-
 
lncRNA
--GENCODE basic
ENST00000667305.1PVT1-3461701No protein-
 
lncRNA
---
ENST00000513868.6PVT1-2031699No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000657356.1PVT1-2631697No protein-
 
lncRNA
--GENCODE basic
ENST00000668619.1PVT1-3571685No protein-
 
lncRNA
---
ENST00000662410.1PVT1-3071668No protein-
 
lncRNA
---
ENST00000667630.1PVT1-3491634No protein-
 
lncRNA
---
ENST00000666776.1PVT1-3401628No protein-
 
lncRNA
--GENCODE basic
ENST00000522963.6PVT1-2151619No protein-
 
lncRNA
--GENCODE basicTSL:4
ENST00000652816.1PVT1-2291610No protein-
 
lncRNA
---
ENST00000670204.1PVT1-3661600No protein-
 
lncRNA
--GENCODE basic
ENST00000656402.1PVT1-2501585No protein-
 
lncRNA
---
ENST00000657289.1PVT1-2611581No protein-
 
lncRNA
---
ENST00000661988.1PVT1-3051580No protein-
 
lncRNA
---
ENST00000521122.2PVT1-2101578No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000666777.1PVT1-3411555No protein-
 
lncRNA
---
ENST00000661160.1PVT1-3001546No protein-
 
lncRNA
---
ENST00000521951.1PVT1-2121535No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000659666.1PVT1-2861533No protein-
 
lncRNA
--GENCODE basic
ENST00000661625.1PVT1-3031519No protein-
 
lncRNA
--GENCODE basic
ENST00000669416.1PVT1-3621516No protein-
 
lncRNA
---
ENST00000517790.2PVT1-2051513No protein-
 
lncRNA
--TSL:2
ENST00000657112.1PVT1-2581499No protein-
 
lncRNA
---
ENST00000661830.1PVT1-3041490No protein-
 
lncRNA
---
ENST00000653853.1PVT1-2371490No protein-
 
lncRNA
---
ENST00000669951.1PVT1-3641485No protein-
 
lncRNA
---
ENST00000654369.1PVT1-2421482No protein-
 
lncRNA
---
ENST00000666080.1PVT1-3341481No protein-
 
lncRNA
---
ENST00000663461.1PVT1-3121471No protein-
 
lncRNA
---
ENST00000523190.7PVT1-2171466No protein-
 
lncRNA
--TSL:3
ENST00000667149.1PVT1-3441463No protein-
 
lncRNA
---
ENST00000654105.1PVT1-2401460No protein-
 
lncRNA
---
ENST00000657596.1PVT1-2681455No protein-
 
lncRNA
---
ENST00000657451.1PVT1-2661454No protein-
 
lncRNA
---
ENST00000661205.1PVT1-3011449No protein-
 
lncRNA
---
ENST00000668123.1PVT1-3521433No protein-
 
lncRNA
---
ENST00000669272.1PVT1-3601417No protein-
 
lncRNA
---
ENST00000654324.1PVT1-2411411No protein-
 
lncRNA
---
ENST00000665737.1PVT1-3301410No protein-
 
lncRNA
---
ENST00000658350.1PVT1-2791402No protein-
 
lncRNA
---
ENST00000664299.1PVT1-3191396No protein-
 
lncRNA
---
ENST00000671092.1PVT1-3751393No protein-
 
lncRNA
---
ENST00000657667.1PVT1-2691378No protein-
 
lncRNA
---
ENST00000659625.1PVT1-2851363No protein-
 
lncRNA
---
ENST00000657211.1PVT1-2601353No protein-
 
lncRNA
---
ENST00000670795.1PVT1-3731348No protein-
 
lncRNA
---
ENST00000663059.1PVT1-3111330No protein-
 
lncRNA
---
ENST00000653990.1PVT1-2381329No protein-
 
lncRNA
---
ENST00000670223.1PVT1-3671321No protein-
 
lncRNA
---
ENST00000656999.1PVT1-2571314No protein-
 
lncRNA
---
ENST00000666353.1PVT1-3381312No protein-
 
lncRNA
---
ENST00000654091.1PVT1-2391311No protein-
 
lncRNA
---
ENST00000656411.1PVT1-2511281No protein-
 
lncRNA
---
ENST00000669082.1PVT1-3581280No protein-
 
lncRNA
---
ENST00000653497.1PVT1-2331278No protein-
 
lncRNA
---
ENST00000653522.1PVT1-2341275No protein-
 
lncRNA
---
ENST00000667714.1PVT1-3501269No protein-
 
lncRNA
---
ENST00000653845.1PVT1-2361262No protein-
 
lncRNA
---
ENST00000685634.1PVT1-3781256No protein-
 
lncRNA
---
ENST00000657517.1PVT1-2671253No protein-
 
lncRNA
---
ENST00000664293.1PVT1-3181206No protein-
 
lncRNA
---
ENST00000663753.1PVT1-3141206No protein-
 
lncRNA
---
ENST00000664742.1PVT1-3211200No protein-
 
lncRNA
---
ENST00000660122.1PVT1-2901199No protein-
 
lncRNA
---
ENST00000517525.2PVT1-2041194No protein-
 
lncRNA
--TSL:3
ENST00000671088.1PVT1-3741191No protein-
 
lncRNA
---
ENST00000657183.1PVT1-2591172No protein-
 
lncRNA
--GENCODE basic
ENST00000656491.1PVT1-2521167No protein-
 
lncRNA
---
ENST00000658556.1PVT1-2811163No protein-
 
lncRNA
---
ENST00000692433.1PVT1-3821163No protein-
 
lncRNA
---
ENST00000665721.1PVT1-3291162No protein-
 
lncRNA
---
ENST00000669132.1PVT1-3591156No protein-
 
lncRNA
---
ENST00000662766.1PVT1-3101152No protein-
 
lncRNA
---
ENST00000660200.1PVT1-2921139No protein-
 
lncRNA
--GENCODE basic
ENST00000662061.1PVT1-3061139No protein-
 
lncRNA
---
ENST00000522414.2PVT1-2131132No protein-
 
lncRNA
--TSL:2
ENST00000660896.1PVT1-2981128No protein-
 
lncRNA
---
ENST00000652695.1PVT1-2271126No protein-
 
lncRNA
---
ENST00000670602.1PVT1-3701124No protein-
 
lncRNA
---
ENST00000655783.1PVT1-2461118No protein-
 
lncRNA
---
ENST00000524165.6PVT1-2201114No protein-
 
lncRNA
--TSL:2
ENST00000664610.1PVT1-3201114No protein-
 
lncRNA
---
ENST00000670626.1PVT1-3711114No protein-
 
lncRNA
---
ENST00000512617.7PVT1-2021109No protein-
 
lncRNA
--TSL:3
ENST00000656077.1PVT1-2471109No protein-
 
lncRNA
--GENCODE basic
ENST00000665246.1PVT1-3261096No protein-
 
lncRNA
---
ENST00000668479.1PVT1-3551091No protein-
 
lncRNA
---
ENST00000657384.1PVT1-2641068No protein-
 
lncRNA
---
ENST00000669509.1PVT1-3631066No protein-
 
lncRNA
---
ENST00000666076.1PVT1-3331062No protein-
 
lncRNA
---
ENST00000523328.6PVT1-2181047No protein-
 
lncRNA
--TSL:1
ENST00000667539.1PVT1-3481041No protein-
 
lncRNA
---
ENST00000664139.1PVT1-3151036No protein-
 
lncRNA
---
ENST00000650846.1PVT1-2211020No protein-
 
lncRNA
---
ENST00000666842.1PVT1-3421019No protein-
 
lncRNA
---
ENST00000652492.1PVT1-2261017No protein-
 
lncRNA
--GENCODE basic
ENST00000656880.1PVT1-2551017No protein-
 
lncRNA
---
ENST00000504719.7PVT1-2011017No protein-
 
lncRNA
--TSL:2
ENST00000519481.6PVT1-2081010No protein-
 
lncRNA
--TSL:2
ENST00000685606.1PVT1-3771004No protein-
 
lncRNA
---
ENST00000666452.1PVT1-3391001No protein-
 
lncRNA
---
ENST00000665698.1PVT1-3281000No protein-
 
lncRNA
---
ENST00000518528.2PVT1-207995No protein-
 
lncRNA
--TSL:3
ENST00000655594.1PVT1-245978No protein-
 
lncRNA
---
ENST00000657693.1PVT1-271977No protein-
 
lncRNA
---
ENST00000651568.1PVT1-223971No protein-
 
lncRNA
--GENCODE basic
ENST00000665166.1PVT1-324965No protein-
 
lncRNA
---
ENST00000665175.1PVT1-325964No protein-
 
lncRNA
---
ENST00000666223.1PVT1-337963No protein-
 
lncRNA
---
ENST00000668480.1PVT1-356956No protein-
 
lncRNA
---
ENST00000656396.1PVT1-249938No protein-
 
lncRNA
---
ENST00000656168.1PVT1-248935No protein-
 
lncRNA
--GENCODE basic
ENST00000661391.1PVT1-302924No protein-
 
lncRNA
---
ENST00000522875.5PVT1-214922No protein-
 
lncRNA
--TSL:5
ENST00000690350.1PVT1-380922No protein-
 
lncRNA
---
ENST00000651664.1PVT1-225914No protein-
 
lncRNA
---
ENST00000658158.1PVT1-276909No protein-
 
lncRNA
--GENCODE basic
ENST00000657297.1PVT1-262907No protein-
 
lncRNA
---
ENST00000653608.1PVT1-235906No protein-
 
lncRNA
---
ENST00000656948.1PVT1-256904No protein-
 
lncRNA
---
ENST00000667204.1PVT1-345897No protein-
 
lncRNA
---
ENST00000690788.1PVT1-381891No protein-
 
lncRNA
---
ENST00000669407.1PVT1-361890No protein-
 
lncRNA
---
ENST00000664924.1PVT1-322886No protein-
 
lncRNA
---
ENST00000670535.1PVT1-369876No protein-
 
lncRNA
---
ENST00000660069.1PVT1-289870No protein-
 
lncRNA
---
ENST00000652993.1PVT1-231866No protein-
 
lncRNA
---
ENST00000664214.1PVT1-316861No protein-
 
lncRNA
---
ENST00000662709.1PVT1-309858No protein-
 
lncRNA
---
ENST00000655099.1PVT1-243855No protein-
 
lncRNA
---
ENST00000660781.1PVT1-297854No protein-
 
lncRNA
---
ENST00000692980.1PVT1-383851No protein-
 
lncRNA
---
ENST00000523427.2PVT1-219837No protein-
 
lncRNA
--TSL:3
ENST00000520913.2PVT1-209835No protein-
 
lncRNA
--TSL:2
ENST00000666878.1PVT1-343830No protein-
 
lncRNA
---
ENST00000652883.1PVT1-230821No protein-
 
lncRNA
---
ENST00000517838.6PVT1-206821No protein-
 
lncRNA
--TSL:2
ENST00000658018.1PVT1-274820No protein-
 
lncRNA
---
ENST00000652728.1PVT1-228812No protein-
 
lncRNA
---
ENST00000671587.1PVT1-376803No protein-
 
lncRNA
---
ENST00000659892.1PVT1-287782No protein-
 
lncRNA
---
ENST00000650930.1PVT1-222777No protein-
 
lncRNA
---
ENST00000660146.1PVT1-291764No protein-
 
lncRNA
---
ENST00000665372.1PVT1-327762No protein-
 
lncRNA
---
ENST00000658429.1PVT1-280760No protein-
 
lncRNA
---
ENST00000668351.1PVT1-354759No protein-
 
lncRNA
---
ENST00000660912.1PVT1-299754No protein-
 
lncRNA
---
ENST00000658065.1PVT1-275745No protein-
 
lncRNA
---
ENST00000655148.1PVT1-244724No protein-
 
lncRNA
---
ENST00000657945.1PVT1-273678No protein-
 
lncRNA
---
ENST00000660659.1PVT1-296673No protein-
 
lncRNA
---
ENST00000658305.1PVT1-278641No protein-
 
lncRNA
---
ENST00000653406.1PVT1-232619No protein-
 
lncRNA
---
ENST00000663715.1PVT1-313615No protein-
 
lncRNA
---
ENST00000657682.1PVT1-270611No protein-
 
lncRNA
---
ENST00000657844.1PVT1-272609No protein-
 
lncRNA
---
ENST00000666105.1PVT1-335608No protein-
 
lncRNA
---
ENST00000668215.1PVT1-353590No protein-
 
lncRNA
---
ENST00000689722.1PVT1-379573No protein-
 
lncRNA
---
ENST00000666039.1PVT1-332520No protein-
 
lncRNA
---
ENST00000670009.1PVT1-365456No protein-
 
lncRNA
---
ENST00000658242.1PVT1-277432No protein-
 
lncRNA
---
ENST00000521600.5PVT1-211408No protein-
 
lncRNA
--TSL:2
Description

trophinin [Source:HGNC Symbol;Acc:HGNC:12326]

Gene Synonyms

KIAA1114, MAGE-D3, MAGED3

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000173898.12TRO-20146341431aaENSP00000173898.7
 
Protein coding
CCDS43959Q12816-1 NM_001039705.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000420798.6TRO-2083613962aaENSP00000405126.2
 
Protein coding
CCDS59529Q12816-3 -GENCODE basicTSL:2
ENST00000375041.6TRO-20434881034aaENSP00000364181.2
 
Protein coding
CCDS59528Q12816-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000319167.12TRO-2022326706aaENSP00000318278.8
 
Protein coding
CCDS43958Q12816-2 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000375022.8TRO-2032306706aaENSP00000364162.4
 
Protein coding
CCDS43958Q12816-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000399736.5TRO-2051115309aaENSP00000382641.1
 
Protein coding
CCDS59527Q12816-5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000411534.1TRO-2061196230aaENSP00000388947.1
 
Protein coding
-B1AKF6 -TSL:2CDS 3' incomplete
ENST00000452830.5TRO-21797671aaENSP00000387676.1
 
Protein coding
-B1AKF3 -TSL:2CDS 3' incomplete
ENST00000430420.5TRO-210868192aaENSP00000411717.1
 
Protein coding
-B1AKF5 -TSL:5CDS 3' incomplete
ENST00000453081.5TRO-21872264aaENSP00000412588.1
 
Protein coding
-B1AKF2 -TSL:4CDS 3' incomplete
ENST00000440759.5TRO-213672176aaENSP00000406574.1
 
Protein coding
-B1AKE7 -TSL:4CDS 3' incomplete
ENST00000442098.5TRO-214626168aaENSP00000404645.1
 
Protein coding
-B1AKE6 -TSL:4CDS 3' incomplete
ENST00000440072.5TRO-2125993aaENSP00000405043.1
 
Protein coding
---TSL:4CDS 3' incomplete
ENST00000416704.1TRO-207594168aaENSP00000404767.1
 
Protein coding
-B1AKE6 -TSL:4CDS 3' incomplete
ENST00000449980.1TRO-216578123aaENSP00000392841.1
 
Protein coding
-B1AKF4 -TSL:4CDS 3' incomplete
ENST00000427099.1TRO-209562121aaENSP00000405311.1
 
Protein coding
-E7ERU6 -TSL:3CDS 3' incomplete
ENST00000431115.5TRO-211405102aaENSP00000407996.1
 
Protein coding
-B1AKE8 -TSL:5CDS 3' incomplete
ENST00000445561.5TRO-2152597681aaENSP00000404794.1
 
Nonsense mediated decay
-G5E9N2 -TSL:1
ENST00000622017.5TRO-2251404284aaENSP00000483142.2
 
Nonsense mediated decay
-A0A087X070 -TSL:5
ENST00000484031.5TRO-222650No protein-
 
Processed transcript
---TSL:5
ENST00000475183.1TRO-221632No protein-
 
Processed transcript
---TSL:3
ENST00000492142.5TRO-223485No protein-
 
Processed transcript
---TSL:3
ENST00000474933.6TRO-220299No protein-
 
Processed transcript
---TSL:4
ENST00000492706.5TRO-2243677No protein-
 
Retained intron
---TSL:2
ENST00000469211.1TRO-219842No protein-
 
Retained intron
---TSL:2
Description

islet cell autoantigen 1 like [Source:HGNC Symbol;Acc:HGNC:14442]

Gene Synonyms

ALS2CR14, ALS2CR15

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000358299.7ICA1L-2017961482aaENSP00000351047.2
 
Protein coding
CCDS2354Q8NDH6-1 NM_001288622.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:2
ENST00000617388.4ICA1L-2228151482aaENSP00000478645.1
 
Protein coding
CCDS2354Q8NDH6-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000392237.6ICA1L-2025173482aaENSP00000376070.2
 
Protein coding
CCDS2354Q8NDH6-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000425178.5ICA1L-210879187aaENSP00000404189.1
 
Protein coding
CCDS74632Q8NDH6-2 -GENCODE basicTSL:1
ENST00000421334.1ICA1L-20979942aaENSP00000414916.1
 
Protein coding
-C9JP49 -TSL:4CDS 3' incomplete
ENST00000454326.5ICA1L-21771496aaENSP00000416726.1
 
Protein coding
-C9JDK6 -TSL:4CDS 3' incomplete
ENST00000432273.5ICA1L-21168999aaENSP00000397827.1
 
Protein coding
-C9J5Z0 -TSL:4CDS 3' incomplete
ENST00000418208.5ICA1L-20660277aaENSP00000412158.1
 
Protein coding
-C9J101 -GENCODE basicTSL:4
ENST00000412210.5ICA1L-204595119aaENSP00000387382.1
 
Protein coding
-C9JEP0 -TSL:4CDS 3' incomplete
ENST00000450143.5ICA1L-216576150aaENSP00000410747.1
 
Protein coding
-C9JAQ4 -TSL:4CDS 3' incomplete
ENST00000420558.5ICA1L-208572111aaENSP00000400249.1
 
Protein coding
-C9J0T2 -TSL:4CDS 3' incomplete
ENST00000419460.5ICA1L-207566124aaENSP00000410135.1
 
Protein coding
-C9JEN4 -TSL:5CDS 3' incomplete
ENST00000416760.5ICA1L-20556298aaENSP00000392609.1
 
Protein coding
-C9J1M7 -TSL:5CDS 3' incomplete
ENST00000457524.5ICA1L-218559100aaENSP00000404707.1
 
Protein coding
-C9JDM8 -TSL:4CDS 3' incomplete
ENST00000411681.5ICA1L-20355678aaENSP00000409741.1
 
Protein coding
-C9JRB6 -TSL:4CDS 3' incomplete
ENST00000441547.5ICA1L-215526119aaENSP00000404618.1
 
Protein coding
-C9JEP0 -TSL:4CDS 3' incomplete
ENST00000435143.5ICA1L-212515134aaENSP00000405592.1
 
Protein coding
-C9J9Z8 -TSL:4CDS 3' incomplete
ENST00000438804.5ICA1L-2142481439aaENSP00000398916.1
 
Nonsense mediated decay
-F8WBQ1 -TSL:5
ENST00000437978.5ICA1L-21357560aaENSP00000398420.1
 
Nonsense mediated decay
-F8WBK1 -TSL:4
ENST00000484561.5ICA1L-220974No protein-
 
Retained intron
---TSL:5
ENST00000476602.1ICA1L-219694No protein-
 
Retained intron
---TSL:2
ENST00000494560.1ICA1L-221574No protein-
 
Retained intron
---TSL:4
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000626948.3SOX2-OT-2401584No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
ENST00000656613.1SOX2-OT-2924289No protein-
 
lncRNA
--GENCODE basic
ENST00000670501.1SOX2-OT-3024282No protein-
 
lncRNA
---
ENST00000665187.1SOX2-OT-2984263No protein-
 
lncRNA
--GENCODE basic
ENST00000671456.1SOX2-OT-3034240No protein-
 
lncRNA
---
ENST00000657986.1SOX2-OT-2934162No protein-
 
lncRNA
---
ENST00000646698.1SOX2-OT-2824109No protein-
 
lncRNA
---
ENST00000660576.1SOX2-OT-2944101No protein-
 
lncRNA
---
ENST00000600801.7SOX2-OT-2344085No protein-
 
lncRNA
--TSL:5
ENST00000661842.1SOX2-OT-2954077No protein-
 
lncRNA
---
ENST00000654649.1SOX2-OT-2914032No protein-
 
lncRNA
---
ENST00000596250.7SOX2-OT-2253985No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000498731.6SOX2-OT-2183964No protein-
 
lncRNA
--TSL:1
ENST00000645583.2SOX2-OT-2753870No protein-
 
lncRNA
---
ENST00000646841.2SOX2-OT-2843868No protein-
 
lncRNA
---
ENST00000654538.1SOX2-OT-2903844No protein-
 
lncRNA
--GENCODE basic
ENST00000665033.1SOX2-OT-2963529No protein-
 
lncRNA
---
ENST00000665112.1SOX2-OT-2973462No protein-
 
lncRNA
---
ENST00000647055.1SOX2-OT-2873274No protein-
 
lncRNA
--GENCODE basic
ENST00000476964.6SOX2-OT-2073226No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000647034.2SOX2-OT-2863006No protein-
 
lncRNA
--GENCODE basic
ENST00000493116.6SOX2-OT-2142779No protein-
 
lncRNA
--TSL:4
ENST00000643236.2SOX2-OT-2672454No protein-
 
lncRNA
--GENCODE basic
ENST00000665485.1SOX2-OT-2992297No protein-
 
lncRNA
--GENCODE basic
ENST00000642685.1SOX2-OT-2632276No protein-
 
lncRNA
--GENCODE basic
ENST00000642301.2SOX2-OT-2602271No protein-
 
lncRNA
--GENCODE basic
ENST00000492337.6SOX2-OT-2132184No protein-
 
lncRNA
--TSL:2
ENST00000667332.1SOX2-OT-3002112No protein-
 
lncRNA
---
ENST00000646296.2SOX2-OT-2792094No protein-
 
lncRNA
---
ENST00000642652.2SOX2-OT-2622042No protein-
 
lncRNA
--GENCODE basic
ENST00000646949.2SOX2-OT-2851980No protein-
 
lncRNA
--GENCODE basic
ENST00000643769.1SOX2-OT-2691967No protein-
 
lncRNA
--GENCODE basic
ENST00000644582.1SOX2-OT-2721884No protein-
 
lncRNA
--GENCODE basic
ENST00000466034.7SOX2-OT-2031772No protein-
 
lncRNA
--TSL:1
ENST00000646683.1SOX2-OT-2811766No protein-
 
lncRNA
--GENCODE basic
ENST00000644358.1SOX2-OT-2711703No protein-
 
lncRNA
--GENCODE basic
ENST00000628810.2SOX2-OT-2481675No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000643667.1SOX2-OT-2681622No protein-
 
lncRNA
---
ENST00000645423.2SOX2-OT-2741583No protein-
 
lncRNA
---
ENST00000642218.1SOX2-OT-2591500No protein-
 
lncRNA
--GENCODE basic
ENST00000642922.1SOX2-OT-2651468No protein-
 
lncRNA
--GENCODE basic
ENST00000642823.1SOX2-OT-2641444No protein-
 
lncRNA
--GENCODE basic
ENST00000626299.4SOX2-OT-2371412No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000646508.1SOX2-OT-2801390No protein-
 
lncRNA
--GENCODE basic
ENST00000597347.5SOX2-OT-2261342No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000690586.1SOX2-OT-3131327No protein-
 
lncRNA
--GENCODE basic
ENST00000642429.1SOX2-OT-2611279No protein-
 
lncRNA
---
ENST00000644732.1SOX2-OT-2731242No protein-
 
lncRNA
---
ENST00000691318.1SOX2-OT-3141240No protein-
 
lncRNA
---
ENST00000493521.5SOX2-OT-2151239No protein-
 
lncRNA
--TSL:3
ENST00000647552.1SOX2-OT-2891238No protein-
 
lncRNA
---
ENST00000645960.1SOX2-OT-2761199No protein-
 
lncRNA
---
ENST00000485035.3SOX2-OT-2091162No protein-
 
lncRNA
--TSL:4
ENST00000644304.1SOX2-OT-2701115No protein-
 
lncRNA
---
ENST00000643131.2SOX2-OT-2661097No protein-
 
lncRNA
---
ENST00000647179.1SOX2-OT-2881068No protein-
 
lncRNA
---
ENST00000693669.1SOX2-OT-3151055No protein-
 
lncRNA
---
ENST00000491282.6SOX2-OT-2121040No protein-
 
lncRNA
--TSL:1
ENST00000627501.4SOX2-OT-2411036No protein-
 
lncRNA
--TSL:5
ENST00000630482.2SOX2-OT-2551012No protein-
 
lncRNA
--TSL:5
ENST00000646712.1SOX2-OT-283989No protein-
 
lncRNA
---
ENST00000476125.5SOX2-OT-206979No protein-
 
lncRNA
--TSL:3
ENST00000631025.2SOX2-OT-258954No protein-
 
lncRNA
--TSL:5
ENST00000630553.1SOX2-OT-256905No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000477928.1SOX2-OT-208902No protein-
 
lncRNA
--TSL:2
ENST00000627530.3SOX2-OT-242873No protein-
 
lncRNA
--TSL:5
ENST00000597828.5SOX2-OT-228864No protein-
 
lncRNA
--TSL:5
ENST00000685767.1SOX2-OT-306859No protein-
 
lncRNA
---
ENST00000595084.3SOX2-OT-222850No protein-
 
lncRNA
--TSL:5
ENST00000628211.2SOX2-OT-244847No protein-
 
lncRNA
--TSL:5
ENST00000599082.2SOX2-OT-231836No protein-
 
lncRNA
--TSL:5
ENST00000685509.1SOX2-OT-305831No protein-
 
lncRNA
---
ENST00000629781.4SOX2-OT-252818No protein-
 
lncRNA
--TSL:5
ENST00000628496.3SOX2-OT-247798No protein-
 
lncRNA
--TSL:5
ENST00000646056.1SOX2-OT-278796No protein-
 
lncRNA
---
ENST00000686782.1SOX2-OT-308794No protein-
 
lncRNA
---
ENST00000688647.1SOX2-OT-310792No protein-
 
lncRNA
---
ENST00000600386.6SOX2-OT-232789No protein-
 
lncRNA
--TSL:5
ENST00000629112.4SOX2-OT-249782No protein-
 
lncRNA
--TSL:5
ENST00000600778.3SOX2-OT-233762No protein-
 
lncRNA
--TSL:5
ENST00000593549.6SOX2-OT-220753No protein-
 
lncRNA
--TSL:5
ENST00000487240.3SOX2-OT-210751No protein-
 
lncRNA
--TSL:5
ENST00000630887.3SOX2-OT-257745No protein-
 
lncRNA
--TSL:5
ENST00000628343.3SOX2-OT-245743No protein-
 
lncRNA
--TSL:5
ENST00000626802.2SOX2-OT-239737No protein-
 
lncRNA
--TSL:5
ENST00000595313.5SOX2-OT-224716No protein-
 
lncRNA
--TSL:5
ENST00000689495.1SOX2-OT-311705No protein-
 
lncRNA
---
ENST00000685088.1SOX2-OT-304694No protein-
 
lncRNA
---
ENST00000627738.1SOX2-OT-243692No protein-
 
lncRNA
--TSL:5
ENST00000686214.1SOX2-OT-307679No protein-
 
lncRNA
---
ENST00000629830.3SOX2-OT-253677No protein-
 
lncRNA
--TSL:5
ENST00000594942.5SOX2-OT-221675No protein-
 
lncRNA
--TSL:5
ENST00000668295.2SOX2-OT-301671No protein-
 
lncRNA
---
ENST00000626619.2SOX2-OT-238660No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630150.2SOX2-OT-254649No protein-
 
lncRNA
--TSL:5
ENST00000597651.6SOX2-OT-227626No protein-
 
lncRNA
--TSL:5
ENST00000693697.1SOX2-OT-316610No protein-
 
lncRNA
---
ENST00000460739.5SOX2-OT-201609No protein-
 
lncRNA
--TSL:4
ENST00000689942.1SOX2-OT-312585No protein-
 
lncRNA
---
ENST00000595287.1SOX2-OT-223581No protein-
 
lncRNA
--TSL:5
ENST00000497122.5SOX2-OT-216578No protein-
 
lncRNA
--TSL:4
ENST00000629273.2SOX2-OT-250575No protein-
 
lncRNA
--TSL:5
ENST00000629552.2SOX2-OT-251572No protein-
 
lncRNA
--TSL:5
ENST00000687464.1SOX2-OT-309569No protein-
 
lncRNA
---
ENST00000461063.6SOX2-OT-202566No protein-
 
lncRNA
--TSL:3
ENST00000469278.5SOX2-OT-204561No protein-
 
lncRNA
--TSL:4
ENST00000498226.5SOX2-OT-217560No protein-
 
lncRNA
--TSL:4
ENST00000598474.4SOX2-OT-229512No protein-
 
lncRNA
--TSL:5
ENST00000625581.2SOX2-OT-236495No protein-
 
lncRNA
--TSL:5
ENST00000600962.6SOX2-OT-235469No protein-
 
lncRNA
--TSL:5
ENST00000593330.1SOX2-OT-219468No protein-
 
lncRNA
--TSL:3
ENST00000472856.1SOX2-OT-205454No protein-
 
lncRNA
--TSL:2
ENST00000628347.1SOX2-OT-246445No protein-
 
lncRNA
--TSL:5
ENST00000645983.1SOX2-OT-277392No protein-
 
lncRNA
---
ENST00000490005.2SOX2-OT-211383No protein-
 
lncRNA
--TSL:2
ENST00000598867.1SOX2-OT-230348No protein-
 
lncRNA
--TSL:5
Statistics

Exons: 2, Coding exons: 0, Transcript length: 692 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000627738.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

nested 454 RNA-Seq supported [Definitions]

Transcript-based displays

    HASH(0x35c3f8d8)