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EnsemblEnsembl Home
Description

cancer susceptibility 15 [Source:HGNC Symbol;Acc:HGNC:28245]

Gene Synonyms

LINC00340, lnc-SOX4-1

Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000688254.1CASC15-3091351No protein-
 
lncRNA
--Ensembl Canonical
ENST00000605917.1CASC15-2044461No protein-
 
lncRNA
--TSL:NA
ENST00000666379.2CASC15-2854446No protein-
 
lncRNA
--GENCODE basic
ENST00000606197.2CASC15-2054297No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000652717.1CASC15-2234025No protein-
 
lncRNA
---
ENST00000661893.1CASC15-2623911No protein-
 
lncRNA
---
ENST00000651751.2CASC15-2183629No protein-
 
lncRNA
---
ENST00000652000.1CASC15-2203486No protein-
 
lncRNA
--GENCODE basic
ENST00000652256.1CASC15-2223456No protein-
 
lncRNA
--GENCODE basic
ENST00000655700.1CASC15-2393415No protein-
 
lncRNA
---
ENST00000657828.1CASC15-2463331No protein-
 
lncRNA
---
ENST00000659780.1CASC15-2543172No protein-
 
lncRNA
---
ENST00000666201.1CASC15-2843047No protein-
 
lncRNA
---
ENST00000664406.1CASC15-2712765No protein-
 
lncRNA
---
ENST00000685576.1CASC15-3072612No protein-
 
lncRNA
--GENCODE basic
ENST00000651569.1CASC15-2162438No protein-
 
lncRNA
--GENCODE basic
ENST00000652081.1CASC15-2212387No protein-
 
lncRNA
--GENCODE basic
ENST00000567753.2CASC15-2032162No protein-
 
lncRNA
--GENCODE basicTSL:NA
ENST00000659457.1CASC15-2522076No protein-
 
lncRNA
---
ENST00000669448.1CASC15-2972069No protein-
 
lncRNA
---
ENST00000651007.1CASC15-2121967No protein-
 
lncRNA
---
ENST00000606851.5CASC15-2071889No protein-
 
lncRNA
--TSL:2
ENST00000657548.1CASC15-2431811No protein-
 
lncRNA
---
ENST00000657660.1CASC15-2441795No protein-
 
lncRNA
--GENCODE basic
ENST00000655154.1CASC15-2361742No protein-
 
lncRNA
---
ENST00000687332.1CASC15-3081689No protein-
 
lncRNA
---
ENST00000650782.1CASC15-2111676No protein-
 
lncRNA
--GENCODE basic
ENST00000664756.1CASC15-2771667No protein-
 
lncRNA
---
ENST00000668137.1CASC15-2911661No protein-
 
lncRNA
---
ENST00000650720.2CASC15-2101652No protein-
 
lncRNA
---
ENST00000667719.1CASC15-2891644No protein-
 
lncRNA
---
ENST00000653320.1CASC15-2271639No protein-
 
lncRNA
---
ENST00000653010.1CASC15-2241635No protein-
 
lncRNA
---
ENST00000607048.5CASC15-2081634No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000664780.1CASC15-2781621No protein-
 
lncRNA
---
ENST00000653997.1CASC15-2291616No protein-
 
lncRNA
--GENCODE basic
ENST00000692274.1CASC15-3121612No protein-
 
lncRNA
---
ENST00000670293.1CASC15-3001573No protein-
 
lncRNA
--GENCODE basic
ENST00000670467.1CASC15-3011523No protein-
 
lncRNA
---
ENST00000671659.1CASC15-3051513No protein-
 
lncRNA
---
ENST00000654774.1CASC15-2311499No protein-
 
lncRNA
---
ENST00000444265.6CASC15-2011497No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000654942.1CASC15-2351497No protein-
 
lncRNA
--GENCODE basic
ENST00000665014.1CASC15-2811492No protein-
 
lncRNA
---
ENST00000651125.1CASC15-2131487No protein-
 
lncRNA
---
ENST00000561912.3CASC15-2021484No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000658974.1CASC15-2501484No protein-
 
lncRNA
---
ENST00000664808.1CASC15-2791480No protein-
 
lncRNA
---
ENST00000663957.1CASC15-2681470No protein-
 
lncRNA
---
ENST00000660518.1CASC15-2571464No protein-
 
lncRNA
---
ENST00000685436.1CASC15-3061463No protein-
 
lncRNA
---
ENST00000659720.1CASC15-2531455No protein-
 
lncRNA
---
ENST00000668355.1CASC15-2931445No protein-
 
lncRNA
---
ENST00000669942.1CASC15-2991442No protein-
 
lncRNA
--GENCODE basic
ENST00000664560.1CASC15-2741435No protein-
 
lncRNA
--GENCODE basic
ENST00000669670.1CASC15-2981435No protein-
 
lncRNA
---
ENST00000660934.1CASC15-2581413No protein-
 
lncRNA
---
ENST00000671013.1CASC15-3021402No protein-
 
lncRNA
---
ENST00000691204.1CASC15-3101401No protein-
 
lncRNA
---
ENST00000654807.1CASC15-2331397No protein-
 
lncRNA
---
ENST00000664020.1CASC15-2701378No protein-
 
lncRNA
---
ENST00000668404.1CASC15-2941373No protein-
 
lncRNA
--GENCODE basic
ENST00000659886.1CASC15-2551361No protein-
 
lncRNA
---
ENST00000651758.1CASC15-2191357No protein-
 
lncRNA
---
ENST00000666875.1CASC15-2861356No protein-
 
lncRNA
---
ENST00000663874.1CASC15-2671343No protein-
 
lncRNA
---
ENST00000653161.1CASC15-2251341No protein-
 
lncRNA
---
ENST00000671160.1CASC15-3031321No protein-
 
lncRNA
---
ENST00000662187.1CASC15-2641316No protein-
 
lncRNA
--GENCODE basic
ENST00000651620.1CASC15-2171310No protein-
 
lncRNA
---
ENST00000655292.1CASC15-2371309No protein-
 
lncRNA
---
ENST00000669171.1CASC15-2961306No protein-
 
lncRNA
---
ENST00000606336.5CASC15-2061288No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000691572.1CASC15-3111278No protein-
 
lncRNA
---
ENST00000664889.1CASC15-2801274No protein-
 
lncRNA
---
ENST00000668219.1CASC15-2921271No protein-
 
lncRNA
---
ENST00000662805.1CASC15-2661269No protein-
 
lncRNA
---
ENST00000657825.1CASC15-2451268No protein-
 
lncRNA
---
ENST00000664431.1CASC15-2721264No protein-
 
lncRNA
---
ENST00000660187.1CASC15-2561257No protein-
 
lncRNA
---
ENST00000653763.1CASC15-2281234No protein-
 
lncRNA
---
ENST00000664500.1CASC15-2731230No protein-
 
lncRNA
---
ENST00000655886.1CASC15-2421226No protein-
 
lncRNA
---
ENST00000661662.1CASC15-2601224No protein-
 
lncRNA
---
ENST00000655498.1CASC15-2381204No protein-
 
lncRNA
---
ENST00000661200.1CASC15-2591189No protein-
 
lncRNA
---
ENST00000667830.1CASC15-2901188No protein-
 
lncRNA
--GENCODE basic
ENST00000636388.1CASC15-2091174No protein-
 
lncRNA
--TSL:5
ENST00000664625.1CASC15-2751167No protein-
 
lncRNA
---
ENST00000692822.1CASC15-3131164No protein-
 
lncRNA
---
ENST00000654262.1CASC15-2301154No protein-
 
lncRNA
---
ENST00000664716.1CASC15-2761116No protein-
 
lncRNA
---
ENST00000665902.1CASC15-2821098No protein-
 
lncRNA
---
ENST00000667291.1CASC15-2881078No protein-
 
lncRNA
--GENCODE basic
ENST00000653246.1CASC15-2261062No protein-
 
lncRNA
---
ENST00000654782.1CASC15-2321036No protein-
 
lncRNA
---
ENST00000666108.1CASC15-283985No protein-
 
lncRNA
---
ENST00000655702.1CASC15-240982No protein-
 
lncRNA
---
ENST00000662172.1CASC15-263979No protein-
 
lncRNA
--GENCODE basic
ENST00000655824.1CASC15-241974No protein-
 
lncRNA
---
ENST00000658841.1CASC15-249959No protein-
 
lncRNA
---
ENST00000659237.1CASC15-251952No protein-
 
lncRNA
---
ENST00000651277.1CASC15-214831No protein-
 
lncRNA
---
ENST00000668839.1CASC15-295815No protein-
 
lncRNA
---
ENST00000671524.1CASC15-304805No protein-
 
lncRNA
---
ENST00000654918.1CASC15-234752No protein-
 
lncRNA
---
ENST00000658187.1CASC15-247740No protein-
 
lncRNA
---
ENST00000651481.1CASC15-215732No protein-
 
lncRNA
---
ENST00000658810.1CASC15-248710No protein-
 
lncRNA
---
ENST00000667176.1CASC15-287704No protein-
 
lncRNA
---
ENST00000661722.1CASC15-261633No protein-
 
lncRNA
---
ENST00000662510.1CASC15-265600No protein-
 
lncRNA
---
ENST00000663998.1CASC15-269550No protein-
 
lncRNA
---
Description

MUC20 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:53807]

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000629807.2MUC20-OT1-319466No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
ENST00000445430.5MUC20-OT1-2124208No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000445707.3MUC20-OT1-2132363No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000429897.5MUC20-OT1-2072131No protein-
 
lncRNA
--TSL:2
ENST00000597482.5MUC20-OT1-2311476No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000453324.5MUC20-OT1-2191439No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000457233.5MUC20-OT1-2211279No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000627562.2MUC20-OT1-2931184No protein-
 
lncRNA
--TSL:5
ENST00000451982.6MUC20-OT1-2171161No protein-
 
lncRNA
--TSL:5
ENST00000631189.2MUC20-OT1-3361156No protein-
 
lncRNA
--TSL:5
ENST00000601955.5MUC20-OT1-2431123No protein-
 
lncRNA
--TSL:5
ENST00000600197.1MUC20-OT1-2381090No protein-
 
lncRNA
--TSL:5
ENST00000593988.2MUC20-OT1-2221072No protein-
 
lncRNA
--TSL:5
ENST00000626617.2MUC20-OT1-2741014No protein-
 
lncRNA
--TSL:5
ENST00000598992.5MUC20-OT1-2351005No protein-
 
lncRNA
--TSL:5
ENST00000627609.1MUC20-OT1-294992No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000625358.2MUC20-OT1-254962No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000608737.3MUC20-OT1-247956No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630243.2MUC20-OT1-324955No protein-
 
lncRNA
--TSL:5
ENST00000594101.3MUC20-OT1-223955No protein-
 
lncRNA
--TSL:5
ENST00000630863.2MUC20-OT1-331954No protein-
 
lncRNA
--TSL:5
ENST00000626220.2MUC20-OT1-268932No protein-
 
lncRNA
--TSL:5
ENST00000627767.1MUC20-OT1-297929No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000630417.2MUC20-OT1-327918No protein-
 
lncRNA
--TSL:5
ENST00000625776.2MUC20-OT1-259911No protein-
 
lncRNA
--TSL:5
ENST00000625632.2MUC20-OT1-257898No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628547.2MUC20-OT1-308882No protein-
 
lncRNA
--TSL:5
ENST00000627502.2MUC20-OT1-290874No protein-
 
lncRNA
--TSL:5
ENST00000627555.2MUC20-OT1-292874No protein-
 
lncRNA
--TSL:5
ENST00000629823.2MUC20-OT1-320869No protein-
 
lncRNA
--TSL:5
ENST00000420851.6MUC20-OT1-204868No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628439.2MUC20-OT1-306864No protein-
 
lncRNA
--TSL:5
ENST00000596584.4MUC20-OT1-229863No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626569.2MUC20-OT1-272857No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000600527.5MUC20-OT1-241852No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626870.2MUC20-OT1-278851No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000627471.2MUC20-OT1-289851No protein-
 
lncRNA
--TSL:5
ENST00000631087.1MUC20-OT1-334848No protein-
 
lncRNA
--TSL:5
ENST00000627152.2MUC20-OT1-285846No protein-
 
lncRNA
--TSL:5
ENST00000626007.2MUC20-OT1-263839No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000597871.1MUC20-OT1-233839No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000629990.1MUC20-OT1-321806No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000625338.1MUC20-OT1-253804No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630830.1MUC20-OT1-330795No protein-
 
lncRNA
--TSL:5
ENST00000628668.2MUC20-OT1-310795No protein-
 
lncRNA
--TSL:5
ENST00000627863.2MUC20-OT1-298793No protein-
 
lncRNA
--TSL:5
ENST00000626089.2MUC20-OT1-264792No protein-
 
lncRNA
--TSL:5
ENST00000630197.2MUC20-OT1-323783No protein-
 
lncRNA
--TSL:5
ENST00000599448.5MUC20-OT1-236780No protein-
 
lncRNA
--TSL:5
ENST00000628392.2MUC20-OT1-305775No protein-
 
lncRNA
--TSL:5
ENST00000628301.2MUC20-OT1-304772No protein-
 
lncRNA
--TSL:5
ENST00000631288.2MUC20-OT1-338764No protein-
 
lncRNA
--TSL:5
ENST00000455807.2MUC20-OT1-220764No protein-
 
lncRNA
--TSL:3
ENST00000629721.2MUC20-OT1-318755No protein-
 
lncRNA
--TSL:5
ENST00000631366.2MUC20-OT1-342751No protein-
 
lncRNA
--TSL:5
ENST00000594976.5MUC20-OT1-226750No protein-
 
lncRNA
--TSL:5
ENST00000602127.5MUC20-OT1-244749No protein-
 
lncRNA
--TSL:5
ENST00000630663.1MUC20-OT1-328746No protein-
 
lncRNA
--TSL:5
ENST00000601648.5MUC20-OT1-242745No protein-
 
lncRNA
--TSL:3
ENST00000626969.2MUC20-OT1-281745No protein-
 
lncRNA
--TSL:5
ENST00000594446.5MUC20-OT1-224740No protein-
 
lncRNA
--TSL:5
ENST00000630874.2MUC20-OT1-332738No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000432601.3MUC20-OT1-210732No protein-
 
lncRNA
--TSL:5
ENST00000597034.5MUC20-OT1-230731No protein-
 
lncRNA
--TSL:5
ENST00000627363.2MUC20-OT1-288731No protein-
 
lncRNA
--TSL:5
ENST00000414625.6MUC20-OT1-201729No protein-
 
lncRNA
--TSL:5
ENST00000594715.5MUC20-OT1-225729No protein-
 
lncRNA
--TSL:5
ENST00000600288.5MUC20-OT1-239728No protein-
 
lncRNA
--TSL:5
ENST00000599566.5MUC20-OT1-237718No protein-
 
lncRNA
--TSL:5
ENST00000630387.2MUC20-OT1-325714No protein-
 
lncRNA
--TSL:5
ENST00000615493.4MUC20-OT1-250712No protein-
 
lncRNA
--TSL:5
ENST00000627297.2MUC20-OT1-286708No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000595086.5MUC20-OT1-227704No protein-
 
lncRNA
--TSL:5
ENST00000631105.2MUC20-OT1-335702No protein-
 
lncRNA
--TSL:5
ENST00000620737.3MUC20-OT1-252702No protein-
 
lncRNA
--TSL:5
ENST00000631359.2MUC20-OT1-341702No protein-
 
lncRNA
--TSL:5
ENST00000626979.2MUC20-OT1-282698No protein-
 
lncRNA
--TSL:5
ENST00000417704.5MUC20-OT1-202694No protein-
 
lncRNA
--TSL:3
ENST00000625824.2MUC20-OT1-260692No protein-
 
lncRNA
--TSL:5
ENST00000626156.1MUC20-OT1-266683No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000602175.5MUC20-OT1-245673No protein-
 
lncRNA
--TSL:5
ENST00000629686.2MUC20-OT1-317669No protein-
 
lncRNA
--TSL:5
ENST00000628125.2MUC20-OT1-302668No protein-
 
lncRNA
--TSL:5
ENST00000629537.2MUC20-OT1-316666No protein-
 
lncRNA
--TSL:5
ENST00000595382.5MUC20-OT1-228659No protein-
 
lncRNA
--TSL:5
ENST00000626346.2MUC20-OT1-270652No protein-
 
lncRNA
--TSL:5
ENST00000626872.2MUC20-OT1-279649No protein-
 
lncRNA
--TSL:5
ENST00000626233.2MUC20-OT1-269644No protein-
 
lncRNA
--TSL:5
ENST00000627512.2MUC20-OT1-291642No protein-
 
lncRNA
--TSL:5
ENST00000627993.2MUC20-OT1-299633No protein-
 
lncRNA
--TSL:5
ENST00000628823.2MUC20-OT1-312616No protein-
 
lncRNA
--TSL:5
ENST00000625971.2MUC20-OT1-262615No protein-
 
lncRNA
--TSL:5
ENST00000625383.2MUC20-OT1-255612No protein-
 
lncRNA
--TSL:5
ENST00000626706.1MUC20-OT1-276608No protein-
 
lncRNA
--TSL:5
ENST00000630675.2MUC20-OT1-329608No protein-
 
lncRNA
--TSL:5
ENST00000618708.3MUC20-OT1-251606No protein-
 
lncRNA
--TSL:5
ENST00000451228.5MUC20-OT1-216604No protein-
 
lncRNA
--TSL:3
ENST00000600382.5MUC20-OT1-240599No protein-
 
lncRNA
--TSL:5
ENST00000626904.2MUC20-OT1-280598No protein-
 
lncRNA
--TSL:5
ENST00000612098.4MUC20-OT1-248592No protein-
 
lncRNA
--TSL:5
ENST00000446521.1MUC20-OT1-214584No protein-
 
lncRNA
--TSL:4
ENST00000630170.2MUC20-OT1-322584No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000452844.5MUC20-OT1-218583No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000628053.2MUC20-OT1-301582No protein-
 
lncRNA
--TSL:5
ENST00000597982.5MUC20-OT1-234579No protein-
 
lncRNA
--TSL:5
ENST00000597662.5MUC20-OT1-232570No protein-
 
lncRNA
--TSL:5
ENST00000630415.2MUC20-OT1-326560No protein-
 
lncRNA
--TSL:5
ENST00000628982.1MUC20-OT1-314554No protein-
 
lncRNA
--TSL:5
ENST00000628195.2MUC20-OT1-303552No protein-
 
lncRNA
--TSL:5
ENST00000626585.2MUC20-OT1-273544No protein-
 
lncRNA
--TSL:5
ENST00000420459.5MUC20-OT1-203543No protein-
 
lncRNA
--TSL:2
ENST00000628508.2MUC20-OT1-307542No protein-
 
lncRNA
--TSL:5
ENST00000425425.1MUC20-OT1-206525No protein-
 
lncRNA
--TSL:2
ENST00000438608.5MUC20-OT1-211525No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000631352.2MUC20-OT1-340523No protein-
 
lncRNA
--TSL:5
ENST00000626566.2MUC20-OT1-271521No protein-
 
lncRNA
--TSL:5
ENST00000627356.2MUC20-OT1-287519No protein-
 
lncRNA
--TSL:5
ENST00000628003.2MUC20-OT1-300511No protein-
 
lncRNA
--TSL:5
ENST00000626852.2MUC20-OT1-277511No protein-
 
lncRNA
--TSL:5
ENST00000627718.2MUC20-OT1-296510No protein-
 
lncRNA
--TSL:5
ENST00000631345.2MUC20-OT1-339507No protein-
 
lncRNA
--TSL:5
ENST00000432194.7MUC20-OT1-209503No protein-
 
lncRNA
--TSL:5
ENST00000627016.2MUC20-OT1-283503No protein-
 
lncRNA
--TSL:5
ENST00000625665.1MUC20-OT1-258496No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628917.2MUC20-OT1-313490No protein-
 
lncRNA
--TSL:5
ENST00000431767.5MUC20-OT1-208486No protein-
 
lncRNA
--TSL:5
ENST00000625882.2MUC20-OT1-261484No protein-
 
lncRNA
--TSL:5
ENST00000615212.4MUC20-OT1-249473No protein-
 
lncRNA
--TSL:5
ENST00000625531.2MUC20-OT1-256468No protein-
 
lncRNA
--TSL:5
ENST00000628567.2MUC20-OT1-309463No protein-
 
lncRNA
--TSL:5
ENST00000627035.2MUC20-OT1-284458No protein-
 
lncRNA
--TSL:5
ENST00000631263.2MUC20-OT1-337455No protein-
 
lncRNA
--TSL:5
ENST00000631037.2MUC20-OT1-333451No protein-
 
lncRNA
--TSL:5
ENST00000424730.5MUC20-OT1-205431No protein-
 
lncRNA
--TSL:5
ENST00000628754.2MUC20-OT1-311430No protein-
 
lncRNA
--TSL:5
ENST00000608699.3MUC20-OT1-246415No protein-
 
lncRNA
--TSL:5
ENST00000627689.2MUC20-OT1-295409No protein-
 
lncRNA
--TSL:5
ENST00000451216.6MUC20-OT1-215405No protein-
 
lncRNA
--TSL:5
ENST00000629511.2MUC20-OT1-315393No protein-
 
lncRNA
--TSL:5
ENST00000626677.1MUC20-OT1-275378No protein-
 
lncRNA
--TSL:5
ENST00000626178.2MUC20-OT1-267342No protein-
 
lncRNA
--TSL:5
ENST00000626093.1MUC20-OT1-265229No protein-
 
lncRNA
--TSL:5
Statistics

Exons: 4, Coding exons: 0, Transcript length: 486 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000431767.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x27fb0218)