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EnsemblEnsembl Home
Description

estrogen receptor 1 [Source:HGNC Symbol;Acc:HGNC:3467]

Gene Synonyms

ER-alpha, ESR, Era, NR3A1

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000206249.8ESR1-2016327595aaENSP00000206249.3
 
Protein coding
CCDS5234P03372-1 NM_000125.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000440973.5ESR1-2076466595aaENSP00000405330.1
 
Protein coding
CCDS5234P03372-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000443427.5ESR1-2086357595aaENSP00000387500.1
 
Protein coding
CCDS5234P03372-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000427531.6ESR1-2065436310aaENSP00000394721.2
 
Protein coding
CCDS87457H0Y4W6 -GENCODE basicTSL:1
ENST00000338799.9ESR1-2023335595aaENSP00000342630.5
 
Protein coding
CCDS5234P03372-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000456483.3ESR1-2101368152aaENSP00000415934.3
 
Protein coding
-Q9H2M2 -GENCODE basicTSL:1
ENST00000406599.5ESR1-2041251334aaENSP00000384064.1
 
Protein coding
-Q9H2M1 -GENCODE basicTSL:1
ENST00000446550.1ESR1-209731115aaENSP00000411105.1
 
Protein coding
-Q9UE35 -TSL:1CDS 3' incomplete
ENST00000404742.5ESR1-20362484aaENSP00000385373.1
 
Protein coding
-Q5T5H8 -TSL:1CDS 3' incomplete
ENST00000415488.1ESR1-205323107aaENSP00000401995.1
 
Protein coding
-B0QYW7 -TSL:1CDS 5' and 3' incomplete
ENST00000641399.1ESR1-2141207No protein-
 
Processed transcript
----
ENST00000482101.1ESR1-212641No protein-
 
Processed transcript
---TSL:3
ENST00000488573.1ESR1-213530No protein-
 
Processed transcript
---TSL:3
ENST00000473497.5ESR1-211219No protein-
 
Processed transcript
---TSL:1
Description

cyclin dependent kinase inhibitor 2A [Source:HGNC Symbol;Acc:HGNC:1787]

Gene Synonyms

ARF, CDK4I, CDKN2, CMM2, INK4, INK4a, MLM, MTS1, p14, p14ARF, p16, p16INK4a, p19, p19Arf

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000304494.10CDKN2A-201978156aaENSP00000307101.5
 
Protein coding
CCDS6510P42771-1 NM_000077.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000579755.2CDKN2A-2141052132aaENSP00000462950.1
 
Protein coding
CCDS6511Q8N726-1 NM_058195.4MANE Plus Clinical v0.95GENCODE basicTSL:1
ENST00000494262.5CDKN2A-206989105aaENSP00000464952.1
 
Protein coding
CCDS87644P42771-2 -GENCODE basicTSL:3
ENST00000498628.6CDKN2A-209926105aaENSP00000467857.1
 
Protein coding
CCDS87644P42771-2 -GENCODE basicTSL:2
ENST00000498124.1CDKN2A-208880167aaENSP00000418915.1
 
Protein coding
CCDS56565P42771-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000530628.2CDKN2A-210748132aaENSP00000432664.2
 
Protein coding
CCDS6511Q8N726-1 -GENCODE basicTSL:5
ENST00000578845.2CDKN2A-212678105aaENSP00000467390.1
 
Protein coding
CCDS87644P42771-2 -GENCODE basicTSL:2
ENST00000579122.1CDKN2A-213666138aaENSP00000464202.1
 
Protein coding
-J3QRG6 -GENCODE basicAPPRIS ALT2TSL:3
ENST00000497750.1CDKN2A-207565104aaENSP00000468510.1
 
Protein coding
-K7ES20 -GENCODE basicTSL:4
ENST00000479692.2CDKN2A-205544121aaENSP00000466887.1
 
Protein coding
-K7ENC6 -GENCODE basicTSL:5
ENST00000380151.3CDKN2A-203794116aaENSP00000369496.3
 
Nonsense mediated decay
-P42771-3 -TSL:1
ENST00000470819.2CDKN2A-204856No protein-
 
Processed transcript
---TSL:3
ENST00000380150.2CDKN2A-202493No protein-
 
Processed transcript
---TSL:3
ENST00000577854.1CDKN2A-211442No protein-
 
Processed transcript
---TSL:3
Description

basonuclin 2 [Source:MGI Symbol;Acc:MGI:2443805]

Gene Synonyms

5031434M05Rik, 8430420F16Rik

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000176691.8Bnc2-21533851032aaENSMUSP00000135375.2
 
Protein coding
CCDS18301Q8BMQ3-2 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000102820.9Bnc2-20141331127aaENSMUSP00000099884.3
 
Protein coding
-Q8BMQ3-1 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000176612.8Bnc2-2143963861aaENSMUSP00000135778.2
 
Protein coding
-H3BLG6 GENCODE basicTSL:5
ENSMUST00000107198.9Bnc2-20239481099aaENSMUSP00000102816.3
 
Protein coding
-H3BIU2 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000176418.8Bnc2-2111236405aaENSMUSP00000135569.2
 
Protein coding
-H3BKX5 TSL:5CDS 3' incomplete
ENSMUST00000175800.8Bnc2-2061232294aaENSMUSP00000134795.2
 
Protein coding
-H3BJ03 TSL:5CDS 3' incomplete
ENSMUST00000176971.2Bnc2-2181127239aaENSMUSP00000135607.2
 
Protein coding
-H3BL10 TSL:5CDS 5' incomplete
ENSMUST00000176947.8Bnc2-217763237aaENSMUSP00000135411.2
 
Protein coding
-H3BKJ2 TSL:5CDS 3' incomplete
ENSMUST00000176702.8Bnc2-216723241aaENSMUSP00000134774.2
 
Protein coding
-H3BIY6 TSL:5CDS 5' and 3' incomplete
ENSMUST00000175969.8Bnc2-207636181aaENSMUSP00000135656.2
 
Protein coding
-H3BL54 TSL:5CDS 3' incomplete
ENSMUST00000177040.2Bnc2-220626126aaENSMUSP00000135089.2
 
Protein coding
-H3BJR1 TSL:5CDS 5' incomplete
ENSMUST00000176370.2Bnc2-21056629aaENSMUSP00000134953.2
 
Protein coding
-H3BJE5 TSL:5CDS 3' incomplete
ENSMUST00000177277.8Bnc2-22256185aaENSMUSP00000135580.2
 
Protein coding
-H3BKY6 TSL:5CDS 5' incomplete
ENSMUST00000175756.8Bnc2-20436487aaENSMUSP00000135499.2
 
Protein coding
-H3BKR9 TSL:5CDS 3' incomplete
ENSMUST00000176601.2Bnc2-21328086aaENSMUSP00000135480.2
 
Protein coding
-H3BKQ4 TSL:5CDS 5' incomplete
ENSMUST00000176998.8Bnc2-21927682aaENSMUSP00000135283.2
 
Protein coding
-H3BK78 TSL:5CDS 5' incomplete
ENSMUST00000176346.8Bnc2-20969264aaENSMUSP00000134942.2
 
Nonsense mediated decay
-H3BJD5 TSL:3
ENSMUST00000176264.2Bnc2-208845No protein-
 
Processed transcript
--TSL:5
ENSMUST00000175757.8Bnc2-205792No protein-
 
Processed transcript
--TSL:3
ENSMUST00000177256.8Bnc2-221545No protein-
 
Processed transcript
--TSL:5
ENSMUST00000176476.8Bnc2-212541No protein-
 
Processed transcript
--TSL:5
ENSMUST00000123276.8Bnc2-2032986No protein-
 
Retained intron
--TSL:2
Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000619729.1-29498aaENSP00000481152.1
 
Protein coding
--Ensembl CanonicalGENCODE basicTSL:NA
Description

long intergenic non-protein coding RNA 941

Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000648700.1-843No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000648050.1-16489No protein-
 
lncRNA
--GENCODE basic
ENST00000650198.1-5367No protein-
 
lncRNA
---
ENST00000650193.1-2391No protein-
 
lncRNA
---
ENST00000649354.1-2134No protein-
 
lncRNA
--GENCODE basic
ENST00000550292.2-1458No protein-
 
lncRNA
--TSL:2
ENST00000649043.1-1431No protein-
 
lncRNA
---
ENST00000648367.1-1402No protein-
 
lncRNA
--GENCODE basic
ENST00000547804.2-1250No protein-
 
lncRNA
--TSL:1
ENST00000649324.1-1106No protein-
 
lncRNA
---
ENST00000649390.1-1039No protein-
 
lncRNA
---
ENST00000649555.1-882No protein-
 
lncRNA
---
ENST00000551972.1-688No protein-
 
lncRNA
--TSL:5
Description

protein kinase C, beta [Source:RGD Symbol;Acc:3396]

Gene Synonyms

Pkcb, Prkcb1

Transcript IDNamebpProteinTranslation IDBiotypeUniProt MatchFlags
ENSRNOT00000116223.1Prkcb-2013924633aaENSRNOP00000094736.1
 
Protein coding
--
ENSRNOT00000078705.2Prkcb-2023323673aaENSRNOP00000073511.2
 
Protein coding
A0A0G2K5Q0 -
ENSRNOT00000094409.1Prkcb-2033305667aaENSRNOP00000081034.1
 
Protein coding
--
ENSRNOT00000110215.1Prkcb-2043197631aaENSRNOP00000082450.1
 
Protein coding
--
ENSRNOT00000016418.7Prkcb-2052595671aaENSRNOP00000016417.5
 
Protein coding
F1LS42 P68403 APPRIS P1
ENSRNOT00000117718.1Prkcb-2062469629aaENSRNOP00000077459.1
 
Protein coding
--
ENSRNOT00000096083.1Prkcb-2082410635aaENSRNOP00000077705.1
 
Protein coding
--
ENSRNOT00000016442.9Prkcb-2071848615aaENSRNOP00000016442.6
 
Protein coding
F1LS36 -
Description

tryptophanyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:12729]

Gene Synonyms

IFI53, IFP53, WARS

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000392882.7WARS1-2042639471aaENSP00000376620.2
 
Protein coding
CCDS9960P23381-1 NM_004184.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000355338.6WARS1-2023092471aaENSP00000347495.2
 
Protein coding
CCDS9960P23381-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000344102.9WARS1-2012690430aaENSP00000339485.5
 
Protein coding
CCDS9961P23381-2 -GENCODE basicTSL:5
ENST00000556645.5WARS1-2322508430aaENSP00000451887.1
 
Protein coding
CCDS9961P23381-2 -GENCODE basicTSL:5
ENST00000358655.8WARS1-2032466430aaENSP00000351481.4
 
Protein coding
CCDS9961P23381-2 -GENCODE basicTSL:2
ENST00000557135.5WARS1-2382080471aaENSP00000451460.1
 
Protein coding
CCDS9960P23381-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000557722.5WARS1-243848212aaENSP00000450500.1
 
Protein coding
-G3V277 -TSL:5CDS 3' incomplete
ENST00000556504.5WARS1-230847223aaENSP00000451251.1
 
Protein coding
-G3V3H8 -TSL:5CDS 3' incomplete
ENST00000557297.5WARS1-240821154aaENSP00000451599.1
 
Protein coding
-G3V456 -TSL:3CDS 3' incomplete
ENST00000553395.5WARS1-205801226aaENSP00000451490.1
 
Protein coding
-G3V3Y5 -TSL:5CDS 3' incomplete
ENST00000554601.1WARS1-216719185aaENSP00000451891.1
 
Protein coding
-H0YJP3 -TSL:2CDS 5' incomplete
ENST00000553524.5WARS1-207707150aaENSP00000451349.1
 
Protein coding
-G3V3P2 -TSL:3CDS 3' incomplete
ENST00000555410.5WARS1-223677177aaENSP00000450934.1
 
Protein coding
-G3V2Y7 -TSL:5CDS 3' incomplete
ENST00000555031.5WARS1-22165855aaENSP00000450623.1
 
Protein coding
-G3V2F2 -TSL:2CDS 3' incomplete
ENST00000556698.5WARS1-235640152aaENSP00000450427.1
 
Protein coding
-G3V227 -TSL:4CDS 3' incomplete
ENST00000553545.5WARS1-20859197aaENSP00000451716.1
 
Protein coding
-G3V4C7 -TSL:4CDS 3' incomplete
ENST00000556660.5WARS1-233584114aaENSP00000451402.1
 
Protein coding
-G3V3S7 -TSL:4CDS 3' incomplete
ENST00000553581.1WARS1-20957225aaENSP00000452358.1
 
Protein coding
-G3V5H5 -TSL:4CDS 3' incomplete
ENST00000553413.5WARS1-206568107aaENSP00000452550.1
 
Protein coding
-G3V5W1 -TSL:5CDS 3' incomplete
ENST00000556209.5WARS1-22656470aaENSP00000451027.1
 
Protein coding
-G3V339 -TSL:4CDS 3' incomplete
ENST00000554509.5WARS1-215563105aaENSP00000451894.1
 
Protein coding
-G3V4N0 -TSL:4CDS 3' incomplete
ENST00000554772.5WARS1-218562124aaENSP00000451469.1
 
Protein coding
-G3V3X0 -TSL:3CDS 3' incomplete
ENST00000553769.6WARS1-210560104aaENSP00000451906.2
 
Protein coding
-G3V4N8 -TSL:4CDS 3' incomplete
ENST00000554605.5WARS1-21756068aaENSP00000450978.1
 
Protein coding
-G3V313 -TSL:3CDS 3' incomplete
ENST00000556695.5WARS1-23455358aaENSP00000451777.1
 
Protein coding
-G3V3R3 -TSL:4CDS 3' incomplete
ENST00000556338.5WARS1-228547140aaENSP00000451544.1
 
Protein coding
-G3V423 -TSL:4CDS 3' incomplete
ENST00000554820.5WARS1-21953886aaENSP00000450563.1
 
Protein coding
-G3V2C0 -TSL:4CDS 3' incomplete
ENST00000553934.1WARS1-21253033aaENSP00000452379.1
 
Protein coding
-P78534 -TSL:3CDS 3' incomplete
ENST00000556435.5WARS1-229528153aaENSP00000452519.1
 
Protein coding
-G3V5U1 -TSL:2CDS 3' incomplete
ENST00000556295.5WARS1-22751758aaENSP00000451377.1
 
Protein coding
-G3V3R3 -TSL:3CDS 3' incomplete
ENST00000555813.5WARS1-22541063aaENSP00000451953.1
 
Protein coding
-G3V4S4 -TSL:4CDS 3' incomplete
ENST00000627608.1WARS1-24412340aaENSP00000487316.1
 
Protein coding
-G3V4Q0 -GENCODE basicTSL:5
ENST00000557347.5WARS1-24157740aaENSP00000451922.1
 
Nonsense mediated decay
-G3V4Q0 -TSL:4
ENST00000556783.5WARS1-23656736aaENSP00000451679.1
 
Nonsense mediated decay
-G3V4A3 -TSL:5
ENST00000554084.5WARS1-213866No protein-
 
Processed transcript
---TSL:5
ENST00000555464.1WARS1-224544No protein-
 
Processed transcript
---TSL:4
ENST00000557239.5WARS1-239471No protein-
 
Processed transcript
---TSL:4
ENST00000554950.1WARS1-2201376No protein-
 
Retained intron
---TSL:2
ENST00000553808.5WARS1-2111060No protein-
 
Retained intron
---TSL:2
ENST00000554331.5WARS1-214831No protein-
 
Retained intron
---TSL:2
ENST00000557094.5WARS1-237582No protein-
 
Retained intron
---TSL:2
ENST00000555063.5WARS1-222573No protein-
 
Retained intron
---TSL:2
ENST00000556579.5WARS1-231565No protein-
 
Retained intron
---TSL:2
ENST00000557614.1WARS1-242499No protein-
 
Retained intron
---TSL:2
Description

BAG cochaperone 6 [Source:HGNC Symbol;Acc:HGNC:13919]

Gene Synonyms

BAT3, D6S52E, G3, Scythe

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000454478.6BAG6-41837511132aaENSP00000415427.2
 
Protein coding
-A0A0G2JK23 -Ensembl CanonicalGENCODE basicTSL:1
ENST00000412012.5BAG6-39937791126aaENSP00000408554.1
 
Protein coding
-A0A024RCR6 -GENCODE basicTSL:1
ENST00000413922.6BAG6-40136351126aaENSP00000403652.2
 
Protein coding
-A0A024RCR6 -GENCODE basicTSL:1
ENST00000546462.4BAG6-43036261077aaENSP00000449266.2
 
Protein coding
-A0A0G2JL47 -GENCODE basicTSL:2
ENST00000621056.2BAG6-4313104903aaENSP00000477867.1
 
Protein coding
-P46379-4 -GENCODE basicTSL:2
ENST00000438641.5BAG6-4082407742aaENSP00000409057.1
 
Protein coding
-A0A0G2JJM1 -TSL:5CDS 3' incomplete
ENST00000442870.5BAG6-4111688515aaENSP00000403275.1
 
Protein coding
-F6S6P2 -TSL:5CDS 3' incomplete
ENST00000420942.5BAG6-4031056258aaENSP00000406914.1
 
Protein coding
-F6VEM6 -TSL:2CDS 3' incomplete
ENST00000438546.5BAG6-4071051262aaENSP00000409947.1
 
Protein coding
-F6U341 -TSL:5CDS 3' incomplete
ENST00000438842.5BAG6-409993243aaENSP00000414697.1
 
Protein coding
-A0A1B0GX79 -TSL:3CDS 3' incomplete
ENST00000453928.5BAG6-417902259aaENSP00000405744.1
 
Protein coding
-F6X9W3 -TSL:2CDS 3' incomplete
ENST00000453036.5BAG6-415880262aaENSP00000409196.1
 
Protein coding
-F6U341 -TSL:3CDS 3' incomplete
ENST00000453772.5BAG6-416859244aaENSP00000394240.1
 
Protein coding
-F6WML8 -TSL:5CDS 3' incomplete
ENST00000448278.5BAG6-414844232aaENSP00000408565.1
 
Protein coding
-A0A0G2JJR8 -TSL:3CDS 3' incomplete
ENST00000435066.5BAG6-406807197aaENSP00000411412.1
 
Protein coding
-F6UR09 -TSL:1CDS 3' incomplete
ENST00000457868.5BAG6-420783226aaENSP00000409254.1
 
Protein coding
-H0Y710 -TSL:2CDS 5' incomplete
ENST00000416852.5BAG6-402766244aaENSP00000394714.1
 
Protein coding
-F6WML8 -TSL:3CDS 3' incomplete
ENST00000456067.5BAG6-419747215aaENSP00000410232.1
 
Protein coding
-F6XTU0 -TSL:3CDS 3' incomplete
ENST00000445869.5BAG6-413736245aaENSP00000413551.1
 
Protein coding
-A0A0G2JIA9 -TSL:5CDS 5' and 3' incomplete
ENST00000413373.5BAG6-400714238aaENSP00000396028.1
 
Protein coding
-A0A0G2JJ92 -TSL:3CDS 5' and 3' incomplete
ENST00000430999.5BAG6-404654206aaENSP00000399508.1
 
Protein coding
-F6U1F2 -TSL:3CDS 3' incomplete
ENST00000439917.5BAG6-410554185aaENSP00000397702.1
 
Protein coding
-H0Y7K4 -TSL:5CDS 5' and 3' incomplete
ENST00000433146.5BAG6-405544158aaENSP00000400877.1
 
Protein coding
-F6TC96 -TSL:3CDS 3' incomplete
ENST00000443312.5BAG6-412513136aaENSP00000408761.1
 
Protein coding
-H0Y4L1 -TSL:2CDS 5' incomplete
ENST00000460147.5BAG6-4211000No protein-
 
Processed transcript
---TSL:5
ENST00000476526.1BAG6-423653No protein-
 
Processed transcript
---TSL:3
ENST00000497009.1BAG6-428642No protein-
 
Processed transcript
---TSL:3
ENST00000497114.5BAG6-429639No protein-
 
Processed transcript
---TSL:2
ENST00000480345.5BAG6-424612No protein-
 
Processed transcript
---TSL:3
ENST00000460367.1BAG6-422609No protein-
 
Processed transcript
---TSL:2
ENST00000481045.5BAG6-425488No protein-
 
Processed transcript
---TSL:2
ENST00000484443.1BAG6-427349No protein-
 
Processed transcript
---TSL:2
ENST00000483397.1BAG6-426972No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,688 bps, Translation length: 515 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 3' incomplete

Version

ENST00000442870.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x31871e18)