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Description

CCCTC-binding factor like [Source:HGNC Symbol;Acc:HGNC:16234]

Gene Synonyms

BORIS, CT27, dJ579F20.2

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CTCFL-201ENST00000243914.83500663aaENSP00000243914.3
 
Protein coding
CCDS13459Q8NI51-1 NM_001386993.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
CTCFL-216ENST00000608263.54040663aaENSP00000476783.1
 
Protein coding
CCDS13459Q8NI51-1 -GENCODE basicAPPRIS P2TSL:1
CTCFL-207ENST00000429804.73864613aaENSP00000415329.2
 
Protein coding
CCDS58779Q8NI51-8 -GENCODE basicTSL:1
CTCFL-222ENST00000609232.53668663aaENSP00000476398.1
 
Protein coding
CCDS13459Q8NI51-1 -GENCODE basicAPPRIS P2TSL:1
CTCFL-202ENST00000371196.63491663aaENSP00000360239.2
 
Protein coding
CCDS13459Q8NI51-1 -GENCODE basicAPPRIS P2TSL:1
CTCFL-204ENST00000422869.62966573aaENSP00000399061.2
 
Protein coding
CCDS58782Q8NI51-2 -GENCODE basicTSL:1
CTCFL-208ENST00000432255.62955483aaENSP00000409344.2
 
Protein coding
CCDS58778Q8NI51-4 -GENCODE basicTSL:1
CTCFL-217ENST00000608425.52915627aaENSP00000476458.1
 
Protein coding
CCDS68164V9GY73 -GENCODE basicTSL:1
CTCFL-218ENST00000608440.52749665aaENSP00000477488.1
 
Protein coding
CCDS58781Q8NI51-3 -GENCODE basicAPPRIS ALT2TSL:1
CTCFL-205ENST00000423479.72478700aaENSP00000415579.2
 
Protein coding
CCDS58780Q8NI51-7 -GENCODE basicAPPRIS ALT2TSL:1
CTCFL-212ENST00000539382.52262422aaENSP00000439998.1
 
Protein coding
CCDS58777Q8NI51-5 -GENCODE basicTSL:1
CTCFL-209ENST00000433949.72234460aaENSP00000392034.3
 
Protein coding
CCDS68162Q8NI51-10 -GENCODE basicAPPRIS ALT2TSL:1
CTCFL-221ENST00000608903.52135299aaENSP00000476718.1
 
Protein coding
CCDS68161Q8NI51-11 -GENCODE basicTSL:1
CTCFL-211ENST00000502686.62023403aaENSP00000437999.1
 
Protein coding
CCDS58776Q8NI51-6 -GENCODE basicTSL:1
CTCFL-215ENST00000608158.51984404aaENSP00000477165.1
 
Protein coding
CCDS68163V9GYX4 -GENCODE basicTSL:1
CTCFL-210ENST00000481655.21512404aaENSP00000476577.1
 
Protein coding
CCDS68163V9GYX4 -GENCODE basicTSL:1
CTCFL-206ENST00000426658.63996451aaENSP00000403369.2
 
Nonsense mediated decay
-F5H2V8 -TSL:1
CTCFL-203ENST00000422109.62964427aaENSP00000413713.2
 
Nonsense mediated decay
-Q8NI51-9 -TSL:1
CTCFL-219ENST00000608720.52241426aaENSP00000477412.1
 
Nonsense mediated decay
-V9GZ46 -TSL:1
CTCFL-220ENST00000608858.5905No protein-
 
Processed transcript
---TSL:1
CTCFL-213ENST00000607923.52964No protein-
 
Retained intron
---TSL:1
CTCFL-214ENST00000608108.11628No protein-
 
Retained intron
---TSL:1
Description

CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]

Gene Synonyms

C20orf34, C42, CGI-05, HSPC167

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CDK5RAP1-202ENST00000346416.72080587aaENSP00000217372.2
 
Protein coding
CCDS13219Q96SZ6-3 NM_016408.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
CDK5RAP1-201ENST00000339269.51891510aaENSP00000341840.5
 
Protein coding
CCDS63255Q96SZ6-4 -GENCODE basicTSL:1
CDK5RAP1-203ENST00000357886.82164601aaENSP00000350558.4
 
Protein coding
-Q96SZ6-1 -GENCODE basicTSL:5
CDK5RAP1-210ENST00000473997.51930497aaENSP00000476857.1
 
Protein coding
-Q96SZ6-2 -GENCODE basicAPPRIS ALT2TSL:2
CDK5RAP1-204ENST00000427097.5974256aaENSP00000409474.1
 
Protein coding
-H0Y721 -TSL:5CDS 5' incomplete
CDK5RAP1-211ENST00000477105.5979No protein-
 
Processed transcript
---TSL:5
CDK5RAP1-212ENST00000481964.5945No protein-
 
Processed transcript
---TSL:5
CDK5RAP1-215ENST00000496381.5858No protein-
 
Processed transcript
---TSL:3
CDK5RAP1-213ENST00000482967.5840No protein-
 
Processed transcript
---TSL:3
CDK5RAP1-216ENST00000498525.5777No protein-
 
Processed transcript
---TSL:5
CDK5RAP1-208ENST00000471264.5763No protein-
 
Processed transcript
---TSL:5
CDK5RAP1-206ENST00000461356.5758No protein-
 
Processed transcript
---TSL:2
CDK5RAP1-214ENST00000488723.1708No protein-
 
Processed transcript
---TSL:3
CDK5RAP1-205ENST00000460043.5535No protein-
 
Processed transcript
---TSL:3
CDK5RAP1-207ENST00000461710.52650No protein-
 
Retained intron
---TSL:2
CDK5RAP1-209ENST00000473791.1740No protein-
 
Retained intron
---TSL:2
Description

DEAD-box helicase 20 [Source:HGNC Symbol;Acc:HGNC:2743]

Gene Synonyms

DP103, GEMIN3

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
DDX20-201ENST00000369702.53600824aaENSP00000358716.4
 
Protein coding
CCDS842Q9UHI6-1 NM_007204.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
DDX20-209ENST00000679724.14658824aaENSP00000505857.1
 
Protein coding
CCDS842--GENCODE basicAPPRIS P2
DDX20-216ENST00000680627.13322754aaENSP00000505758.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
DDX20-215ENST00000680518.12817423aaENSP00000506543.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
DDX20-220ENST00000681559.15375279aaENSP00000506100.1
 
Nonsense mediated decay
----
DDX20-204ENST00000533164.63226138aaENSP00000434085.1
 
Nonsense mediated decay
-Q9UHI6-2 -TSL:5
DDX20-208ENST00000679576.13153193aaENSP00000506357.1
 
Nonsense mediated decay
----
DDX20-217ENST00000680936.13076294aaENSP00000506651.1
 
Nonsense mediated decay
----
DDX20-213ENST00000680383.12755345aaENSP00000505119.1
 
Nonsense mediated decay
----
DDX20-207ENST00000679498.17416No protein-
 
Retained intron
----
DDX20-210ENST00000679774.17183No protein-
 
Retained intron
----
DDX20-205ENST00000534200.24697No protein-
 
Retained intron
---TSL:2
DDX20-202ENST00000475700.14332No protein-
 
Retained intron
---TSL:2
DDX20-214ENST00000680415.14322No protein-
 
Retained intron
----
DDX20-221ENST00000681747.13818No protein-
 
Retained intron
----
DDX20-211ENST00000680038.13810No protein-
 
Retained intron
----
DDX20-219ENST00000681529.13522No protein-
 
Retained intron
----
DDX20-212ENST00000680317.13486No protein-
 
Retained intron
----
DDX20-206ENST00000679381.13422No protein-
 
Retained intron
----
DDX20-218ENST00000680983.12688No protein-
 
Retained intron
----
DDX20-203ENST00000524894.2894No protein-
 
Retained intron
---TSL:2
Description

solute carrier family 44 member 4 [Source:HGNC Symbol;Acc:HGNC:13941]

Gene Synonyms

C6orf29, CTL4, DFNA72, FLJ14491, NG22, TPPT

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SLC44A4-246ENST00000442152.62589710aaENSP00000398852.2
 
Protein coding
-Q53GD3 -Ensembl CanonicalGENCODE basicTSL:1
SLC44A4-254ENST00000553147.12634634aaENSP00000448213.1
 
Protein coding
-A0A0G2JL76 -GENCODE basicTSL:2
SLC44A4-253ENST00000553121.52505668aaENSP00000447704.1
 
Protein coding
-Q53GD3 -GENCODE basicTSL:2
SLC44A4-247ENST00000450933.51233411aaENSP00000400263.1
 
Protein coding
-A0A0G2JIN1 -TSL:5CDS 5' and 3' incomplete
SLC44A4-252ENST00000495181.5681No protein-
 
Processed transcript
---TSL:2
SLC44A4-249ENST00000467209.5426No protein-
 
Processed transcript
---TSL:5
SLC44A4-250ENST00000492379.1392No protein-
 
Processed transcript
---TSL:3
SLC44A4-248ENST00000460923.1655No protein-
 
Retained intron
---TSL:3
SLC44A4-251ENST00000494162.1575No protein-
 
Retained intron
---TSL:4
Statistics

Exons: 21, Coding exons: 18, Transcript length: 2,634 bps, Translation length: 634 residues

Transcript Support Level (TSL)

TSL:2

Version

ENST00000553147.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x2f6152a8)