Transcript: ENST00000412872.3

Description

novel transcript

Location

Chromosome 6: 67,887,646-67,889,339 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 893 variant alleles and maps to 205 oligo probes.

Gene

This transcript is a product of gene ENSG00000227706.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000657794.1	-	499	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000660755.1	-	2615	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000666873.1	-	2056	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000652869.1	-	1736	No protein	-	lncRNA	-	-
ENST00000412872.3	-	1605	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000661172.1	-	1575	No protein	-	lncRNA	-	-
ENST00000663640.1	-	1509	No protein	-	lncRNA	-	-
ENST00000662821.1	-	1418	No protein	-	lncRNA	-	-
ENST00000658972.1	-	1297	No protein	-	lncRNA	-	-
ENST00000654364.1	-	1111	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000658272.1	-	1018	No protein	-	lncRNA	-	-
ENST00000667200.1	-	985	No protein	-	lncRNA	-	-
ENST00000660756.1	-	781	No protein	-	lncRNA	-	-
ENST00000670870.1	-	519	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,605 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000412872.3

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000412872.3

Summary

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Transcript: ENST00000412872.3

Summary

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