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EnsemblEnsembl Home
Description

serologically defined colon cancer antigen 8 [Source:MGI Symbol;Acc:MGI:1924066]

Gene Synonyms

2700048G21Rik, 5730470G24Rik, CCCAP

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Sdccag8-201ENSMUST00000027785.152776717aaENSMUSP00000027785.9
 
Protein coding
CCDS35798Q80UF4 GENCODE basicAPPRIS P1TSL:1
Sdccag8-202ENSMUST00000056773.151551379aaENSMUSP00000050667.8
 
Protein coding
-E9Q2E2 GENCODE basicTSL:1
Sdccag8-203ENSMUST00000123409.82891367aaENSMUSP00000137948.2
 
Nonsense mediated decay
-Q05DD9 TSL:5
Sdccag8-205ENSMUST00000139589.2659No protein-
 
Processed transcript
--TSL:2
Sdccag8-204ENSMUST00000133305.82971No protein-
 
Retained intron
--TSL:1
Sdccag8-206ENSMUST00000150429.81398No protein-
 
Retained intron
--TSL:1
Description

cyclin dependent kinase 16 [Source:HGNC Symbol;Acc:HGNC:8749]

Gene Synonyms

FLJ16665, PCTAIRE, PCTAIRE1, PCTGAIRE, PCTK1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CDK16-202ENST00000357227.93151496aaENSP00000349762.4
 
Protein coding
CCDS14276Q00536-1 NM_006201.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
CDK16-204ENST00000457458.63158502aaENSP00000405798.2
 
Protein coding
CCDS48101Q00536-3 -GENCODE basicAPPRIS ALT2TSL:1
CDK16-201ENST00000276052.103016570aaENSP00000276052.6
 
Protein coding
CCDS55408Q00536-2 -GENCODE basicTSL:2
CDK16-211ENST00000518022.52022496aaENSP00000429751.1
 
Protein coding
CCDS14276Q00536-1 -GENCODE basicAPPRIS P4TSL:2
CDK16-223ENST00000622098.42968448aaENSP00000482886.1
 
Protein coding
-A0A087WZU2 -GENCODE basicTSL:2
CDK16-208ENST00000517426.51574393aaENSP00000429985.1
 
Protein coding
-E5RGN0 -TSL:5CDS 3' incomplete
CDK16-220ENST00000523344.51266260aaENSP00000428349.1
 
Protein coding
-H0YAZ9 -TSL:5CDS 5' incomplete
CDK16-213ENST00000519758.5991150aaENSP00000429259.1
 
Protein coding
-E5RIY8 -TSL:3CDS 3' incomplete
CDK16-216ENST00000520893.5943153aaENSP00000428351.1
 
Protein coding
-E5RIU4 -TSL:5CDS 3' incomplete
CDK16-212ENST00000518391.5785189aaENSP00000429044.1
 
Protein coding
-E5RJM2 -TSL:3CDS 3' incomplete
CDK16-206ENST00000462827.266484aaENSP00000430824.1
 
Protein coding
-H0YC36 -TSL:5CDS 5' incomplete
CDK16-218ENST00000522883.160157aaENSP00000431085.1
 
Protein coding
-E5RJQ8 -TSL:4CDS 3' incomplete
CDK16-214ENST00000520141.5498166aaENSP00000430988.1
 
Protein coding
-H0YC60 -TSL:3CDS 5' and 3' incomplete
CDK16-219ENST00000523034.1454152aaENSP00000430486.1
 
Protein coding
-H0YBX5 -TSL:3CDS 5' and 3' incomplete
CDK16-215ENST00000520295.557383aaENSP00000430966.1
 
Nonsense mediated decay
-E5RGV7 -TSL:4
CDK16-210ENST00000517997.5562No protein-
 
Processed transcript
---TSL:4
CDK16-209ENST00000517479.1520No protein-
 
Processed transcript
---TSL:4
CDK16-203ENST00000428400.53016No protein-
 
Retained intron
---TSL:2
CDK16-217ENST00000522234.51679No protein-
 
Retained intron
---TSL:2
CDK16-207ENST00000493213.1866No protein-
 
Retained intron
---TSL:3
CDK16-222ENST00000523699.5675No protein-
 
Retained intron
---TSL:5
CDK16-221ENST00000523543.1533No protein-
 
Retained intron
---TSL:2
CDK16-205ENST00000462483.1527No protein-
 
Retained intron
---TSL:2
Description

cleavage and polyadenylation specific factor 7 [Source:HGNC Symbol;Acc:HGNC:30098]

Gene Synonyms

CFIM59, FLJ12529

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CPSF7-205ENST00000439958.83487462aaENSP00000397203.3
 
Protein coding
CCDS44620Q8N684-2 NM_001142565.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
CPSF7-201ENST00000340437.83695514aaENSP00000345412.4
 
Protein coding
CCDS8006Q8N684-3 -GENCODE basicTSL:1
CPSF7-202ENST00000394888.83650471aaENSP00000378352.4
 
Protein coding
CCDS44619Q8N684-1 -GENCODE basicAPPRIS ALT1TSL:2
CPSF7-206ENST00000448745.51749462aaENSP00000407394.1
 
Protein coding
CCDS44620Q8N684-2 -GENCODE basicAPPRIS P4TSL:5
CPSF7-211ENST00000477890.61234374aaENSP00000437860.1
 
Protein coding
-F5H669 -TSL:5CDS 3' incomplete
CPSF7-219ENST00000539952.5953288aaENSP00000438381.1
 
Protein coding
-F5H047 -TSL:5CDS 3' incomplete
CPSF7-204ENST00000413232.5727204aaENSP00000393828.1
 
Protein coding
-J3QT54 -TSL:3CDS 3' incomplete
CPSF7-222ENST00000544585.5722219aaENSP00000437531.1
 
Protein coding
-F5H6M0 -TSL:2CDS 3' incomplete
CPSF7-208ENST00000450000.5574145aaENSP00000391359.1
 
Protein coding
-C9J323 -TSL:4CDS 3' incomplete
CPSF7-203ENST00000413184.6571138aaENSP00000414295.2
 
Protein coding
-C9JM38 -TSL:4CDS 3' incomplete
CPSF7-207ENST00000449811.5567143aaENSP00000392400.1
 
Protein coding
-C9J286 -TSL:4CDS 3' incomplete
CPSF7-220ENST00000541963.554998aaENSP00000446330.1
 
Protein coding
-F5H1W4 -GENCODE basicTSL:4
CPSF7-226ENST00000626926.1306101aaENSP00000487286.1
 
Protein coding
-F5H6P5 -GENCODE basicTSL:5
CPSF7-214ENST00000535222.5940100aaENSP00000446193.1
 
Nonsense mediated decay
-F5H2K8 -TSL:3
CPSF7-217ENST00000537162.5801101aaENSP00000442819.1
 
Nonsense mediated decay
-F5H6P5 -TSL:3
CPSF7-224ENST00000544990.5646102aaENSP00000440414.1
 
Nonsense mediated decay
-F5GXA3 -TSL:3
CPSF7-216ENST00000536548.5598101aaENSP00000437467.1
 
Nonsense mediated decay
-F5H6P5 -TSL:4
CPSF7-215ENST00000536145.3546101aaENSP00000437768.1
 
Nonsense mediated decay
-F5H6A8 -TSL:4
CPSF7-221ENST00000543545.549593aaENSP00000443504.1
 
Nonsense mediated decay
-F5H5B7 -TSL:5
CPSF7-213ENST00000494016.1656No protein-
 
Processed transcript
---TSL:2
CPSF7-225ENST00000545934.5565No protein-
 
Processed transcript
---TSL:4
CPSF7-209ENST00000463244.6545No protein-
 
Processed transcript
---TSL:4
CPSF7-223ENST00000544669.51800No protein-
 
Retained intron
---TSL:5
CPSF7-218ENST00000537641.51728No protein-
 
Retained intron
---TSL:5
CPSF7-210ENST00000474684.1635No protein-
 
Retained intron
---TSL:3
CPSF7-212ENST00000489728.1488No protein-
 
Retained intron
---TSL:4
Description

inverted formin 2 [Source:HGNC Symbol;Acc:HGNC:23791]

Gene Synonyms

C14orf151, C14orf173, MGC13251

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
INF2-203ENST00000392634.976231249aaENSP00000376410.4
 
Protein coding
CCDS9989Q27J81-1 NM_022489.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:5
INF2-202ENST00000330634.1175781240aaENSP00000376406.3
 
Protein coding
CCDS45173Q27J81-2 -GENCODE basicAPPRIS ALT2TSL:5
INF2-204ENST00000398337.81689234aaENSP00000381380.4
 
Protein coding
CCDS41999Q27J81-3 -GENCODE basicTSL:1
INF2-227ENST00000675207.177321281aaENSP00000502644.1
 
Protein coding
-A0A6Q8PHA2 -GENCODE basicAPPRIS ALT2
INF2-238ENST00000675638.174111222aaENSP00000501647.1
 
Protein coding
-A0A6Q8PF44 -GENCODE basicAPPRIS ALT2
INF2-245ENST00000675980.137681255aaENSP00000502520.1
 
Protein coding
-A0A6Q8PH71 -GENCODE basicAPPRIS ALT2
INF2-232ENST00000675481.137541250aaENSP00000502723.1
 
Protein coding
-A0A6Q8PHG2 -GENCODE basicAPPRIS ALT2
INF2-230ENST00000675329.137261241aaENSP00000502287.1
 
Protein coding
-A0A6Q8PGN3 -GENCODE basic
INF2-224ENST00000674991.12944981aaENSP00000502004.1
 
Protein coding
-A0A6Q8PFW4 -CDS 3' incomplete
INF2-213ENST00000674631.12200614aaENSP00000502830.1
 
Protein coding
-A0A6Q8PHS8 -CDS 5' incomplete
INF2-233ENST00000675482.11020130aaENSP00000501798.1
 
Protein coding
-A0A6Q8PEY8 -CDS 3' incomplete
INF2-216ENST00000674723.1931130aaENSP00000502257.1
 
Protein coding
-A0A6Q8PEY8 -CDS 3' incomplete
INF2-250ENST00000676427.1883130aaENSP00000502106.1
 
Protein coding
-A0A6Q8PEY8 -CDS 3' incomplete
INF2-221ENST00000674869.1837130aaENSP00000501558.1
 
Protein coding
-A0A6Q8PEY8 -CDS 3' incomplete
INF2-212ENST00000674602.1806269aaENSP00000502304.1
 
Protein coding
-A0A6Q8PGK9 -CDS 5' and 3' incomplete
INF2-210ENST00000617571.545561048aaENSP00000483829.2
 
Nonsense mediated decay
-A0A087X118 -TSL:1
INF2-217ENST00000674757.137561051aaENSP00000502202.1
 
Nonsense mediated decay
-A0A6Q8PGC7 --
INF2-214ENST00000674662.13755776aaENSP00000501895.1
 
Nonsense mediated decay
-A0A6Q8PFN5 --
INF2-243ENST00000675809.13749793aaENSP00000502587.1
 
Nonsense mediated decay
-A0A6Q8PH59 --
INF2-211ENST00000674520.13689878aaENSP00000502593.1
 
Nonsense mediated decay
-A0A6Q8PH63 --
INF2-219ENST00000674846.13689773aaENSP00000502431.1
 
Nonsense mediated decay
-A0A6Q8PGU8 --
INF2-220ENST00000674857.13683194aaENSP00000501687.1
 
Nonsense mediated decay
-A0A6Q8PF91 --
INF2-244ENST00000675930.136391160aaENSP00000502456.1
 
Nonsense mediated decay
-A0A6Q8PH25 --
INF2-239ENST00000675724.13632646aaENSP00000502576.1
 
Nonsense mediated decay
-A0A6Q8PH52 --
INF2-235ENST00000675583.13623751aaENSP00000501740.1
 
Nonsense mediated decay
-A0A6Q8PFB9 --
INF2-246ENST00000676016.13593741aaENSP00000502412.1
 
Nonsense mediated decay
-A0A6Q8PGY8 --
INF2-218ENST00000674822.13578159aaENSP00000501552.1
 
Nonsense mediated decay
-A0A6Q8PEY5 --
INF2-249ENST00000676366.135581133aaENSP00000501605.1
 
Nonsense mediated decay
-A0A6Q8PF29 --
INF2-222ENST00000674960.13552316aaENSP00000501841.1
 
Nonsense mediated decay
-A0A6Q8PFJ1 --
INF2-242ENST00000675797.13099358aaENSP00000502023.1
 
Nonsense mediated decay
-A0A6Q8PFY4 --
INF2-201ENST00000252527.83050717aaENSP00000252527.8
 
Nonsense mediated decay
-A0A0A0MQU1 -TSL:2CDS 5' incomplete
INF2-225ENST00000674994.13006230aaENSP00000502442.1
 
Nonsense mediated decay
-A0A6Q8PGX4 --
INF2-241ENST00000675771.12957332aaENSP00000502104.1
 
Nonsense mediated decay
-A0A6Q8PG64 --
INF2-231ENST00000675424.1105118aaENSP00000502293.1
 
Nonsense mediated decay
-A0A6Q8PGJ8 -CDS 5' incomplete
INF2-215ENST00000674686.196718aaENSP00000502757.1
 
Nonsense mediated decay
-A0A6Q8PGJ8 -CDS 5' incomplete
INF2-209ENST00000540171.21307No protein-
 
Processed transcript
---TSL:1
INF2-208ENST00000481338.11102No protein-
 
Processed transcript
---TSL:2
INF2-236ENST00000675603.1934No protein-
 
Processed transcript
----
INF2-223ENST00000674966.1859No protein-
 
Processed transcript
----
INF2-240ENST00000675743.1648No protein-
 
Processed transcript
----
INF2-228ENST00000675248.1577No protein-
 
Processed transcript
----
INF2-247ENST00000676100.1528No protein-
 
Processed transcript
----
INF2-229ENST00000675313.1432No protein-
 
Processed transcript
----
INF2-237ENST00000675616.1431No protein-
 
Processed transcript
----
INF2-248ENST00000676134.1382No protein-
 
Processed transcript
----
INF2-226ENST00000675029.11692No protein-
 
Retained intron
----
INF2-205ENST00000474229.1947No protein-
 
Retained intron
---TSL:3
INF2-207ENST00000480763.2581No protein-
 
Retained intron
---TSL:3
INF2-234ENST00000675557.1547No protein-
 
Retained intron
----
INF2-206ENST00000477497.1545No protein-
 
Retained intron
---TSL:3
Description

elongator acetyltransferase complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:1171]

Gene Synonyms

C11orf19, PAXNEB

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ELP4-229ENST00000640961.28093424aaENSP00000492152.1
 
Protein coding
CCDS7875Q96EB1-1 NM_019040.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ELP4-203ENST00000395934.21961535aaENSP00000379267.2
 
Protein coding
CCDS73272G5E9D4 -GENCODE basicTSL:1
ELP4-202ENST00000379163.101700476aaENSP00000368461.5
 
Protein coding
CCDS73271Q96EB1-3 -GENCODE basicTSL:2
ELP4-218ENST00000639570.15795392aaENSP00000491971.1
 
Protein coding
-A0A1W2PQZ6 -GENCODE basicTSL:5
ELP4-210ENST00000638482.13084424aaENSP00000491641.1
 
Protein coding
-A0A1W2PPP6 -GENCODE basicTSL:5
ELP4-212ENST00000638764.12456101aaENSP00000491284.1
 
Protein coding
-A0A1W2PPR3 -GENCODE basicTSL:5
ELP4-222ENST00000640231.12062475aaENSP00000492475.1
 
Protein coding
-A0A1W2PRF5 -GENCODE basicTSL:5
ELP4-201ENST00000350638.101907425aaENSP00000298937.9
 
Protein coding
-A0A1X7SBS0 -GENCODE basicAPPRIS ALT2TSL:5
ELP4-225ENST00000640533.11801425aaENSP00000492770.1
 
Protein coding
-A0A1W2PS93 -GENCODE basicTSL:5
ELP4-207ENST00000638347.11651395aaENSP00000492567.1
 
Protein coding
-A0A1W2PRF0 -GENCODE basicTSL:5
ELP4-228ENST00000640954.11612450aaENSP00000492376.1
 
Protein coding
-A0A1W2PR08 -GENCODE basicTSL:5
ELP4-219ENST00000639878.11583386aaENSP00000491157.1
 
Protein coding
-A0A1W2PNY5 -GENCODE basicTSL:5
ELP4-223ENST00000640342.11392396aaENSP00000492628.1
 
Protein coding
-A0A1W2PRJ0 -GENCODE basicTSL:5
ELP4-205ENST00000638184.11330359aaENSP00000491155.1
 
Protein coding
-A0A1W2PP47 -TSL:5CDS 5' incomplete
ELP4-216ENST00000639097.1906234aaENSP00000491099.1
 
Protein coding
-A0A1W2PNW2 -TSL:5CDS 5' incomplete
ELP4-217ENST00000639182.185758aaENSP00000491168.1
 
Protein coding
-A0A1W2PNY4 -TSL:5CDS 5' incomplete
ELP4-206ENST00000638317.145071aaENSP00000491924.1
 
Protein coding
-A0A1W2PQW5 -TSL:3CDS 5' incomplete
ELP4-221ENST00000640081.12385131aaENSP00000491839.1
 
Nonsense mediated decay
-A0A1W2PQ05 -TSL:5
ELP4-214ENST00000638917.12306265aaENSP00000491989.1
 
Nonsense mediated decay
-A0A1W2PQA7 -TSL:5
ELP4-215ENST00000638984.11330131aaENSP00000492604.1
 
Nonsense mediated decay
-A0A1W2PS44 -TSL:5CDS 5' incomplete
ELP4-226ENST00000640790.11249128aaENSP00000490975.1
 
Nonsense mediated decay
-A0A1W2PNF7 -TSL:5CDS 5' incomplete
ELP4-204ENST00000474374.51161185aaENSP00000432642.1
 
Nonsense mediated decay
-E9PPJ9 -TSL:5
ELP4-208ENST00000638376.11096138aaENSP00000491326.1
 
Nonsense mediated decay
-A0A1W2PP49 -TSL:5CDS 5' incomplete
ELP4-211ENST00000638508.12163No protein-
 
Processed transcript
---TSL:5
ELP4-224ENST00000640379.1772No protein-
 
Processed transcript
---TSL:5
ELP4-220ENST00000640059.1598No protein-
 
Processed transcript
---TSL:3
ELP4-209ENST00000638384.1576No protein-
 
Processed transcript
---TSL:5
ELP4-213ENST00000638828.14647No protein-
 
Retained intron
---TSL:2
ELP4-227ENST00000640921.12721No protein-
 
Retained intron
---TSL:2
Description

mediator complex subunit 13L [Source:HGNC Symbol;Acc:HGNC:22962]

Gene Synonyms

KIAA1025, THRAP2, TRAP240L

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
MED13L-201ENST00000281928.998852210aaENSP00000281928.3
 
Protein coding
CCDS9177Q71F56 NM_015335.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
MED13L-229ENST00000650226.187172222aaENSP00000496981.1
 
Protein coding
-A0A3B3IRX3 -GENCODE basicAPPRIS ALT2
MED13L-222ENST00000649607.167401605aaENSP00000497064.1
 
Protein coding
-A0A3B3IS46 -CDS 5' incomplete
MED13L-206ENST00000549786.256831545aaENSP00000446782.2
 
Protein coding
-H0YHC1 -TSL:2CDS 5' incomplete
MED13L-203ENST00000548743.235321081aaENSP00000448553.2
 
Protein coding
-F8VRB8 -TSL:3CDS 3' incomplete
MED13L-210ENST00000647567.11312437aaENSP00000497136.1
 
Protein coding
-A0A3B3IS48 -CDS 5' and 3' incomplete
MED13L-207ENST00000551197.2985168aaENSP00000497043.1
 
Protein coding
-A0A3B3IS36 -TSL:5CDS 5' incomplete
MED13L-226ENST00000649775.14852495aaENSP00000496984.1
 
Nonsense mediated decay
-A0A3B3IRS4 -CDS 5' incomplete
MED13L-230ENST00000650375.1441No protein-
 
Processed transcript
----
MED13L-208ENST00000552023.2414No protein-
 
Processed transcript
---TSL:3
MED13L-215ENST00000648593.1360No protein-
 
Processed transcript
----
MED13L-212ENST00000648067.1272No protein-
 
Processed transcript
----
MED13L-232ENST00000650496.1262No protein-
 
Processed transcript
----
MED13L-223ENST00000649627.1202No protein-
 
Processed transcript
----
MED13L-216ENST00000648737.18299No protein-
 
Retained intron
----
MED13L-214ENST00000648379.17496No protein-
 
Retained intron
----
MED13L-218ENST00000648825.16478No protein-
 
Retained intron
----
MED13L-219ENST00000648916.14720No protein-
 
Retained intron
----
MED13L-224ENST00000649655.14712No protein-
 
Retained intron
----
MED13L-211ENST00000647927.14324No protein-
 
Retained intron
----
MED13L-204ENST00000548784.24250No protein-
 
Retained intron
---TSL:3
MED13L-217ENST00000648762.13989No protein-
 
Retained intron
----
MED13L-231ENST00000650443.13856No protein-
 
Retained intron
----
MED13L-220ENST00000649146.13237No protein-
 
Retained intron
----
MED13L-221ENST00000649378.12978No protein-
 
Retained intron
----
MED13L-225ENST00000649762.12749No protein-
 
Retained intron
----
MED13L-228ENST00000650091.12528No protein-
 
Retained intron
----
MED13L-205ENST00000549755.12339No protein-
 
Retained intron
---TSL:NA
MED13L-213ENST00000648173.12053No protein-
 
Retained intron
----
MED13L-227ENST00000649937.11926No protein-
 
Retained intron
----
MED13L-202ENST00000548694.2891No protein-
 
Retained intron
---TSL:5
MED13L-209ENST00000552340.1665No protein-
 
Retained intron
---TSL:3
Description

zinc finger protein 94 [Source:MGI Symbol;Acc:MGI:107610]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Zfp94-202ENSMUST00000108436.82599486aaENSMUSP00000104075.2
 
Protein coding
CCDS57524E9Q6Y4 GENCODE basicAPPRIS ALT2TSL:1
Zfp94-201ENSMUST00000032673.152529480aaENSMUSP00000032673.9
 
Protein coding
CCDS20945Q61117 GENCODE basicAPPRIS P3TSL:1
Zfp94-204ENSMUST00000137781.8902No protein-
 
Processed transcript
--TSL:1
Zfp94-206ENSMUST00000154309.2610No protein-
 
Processed transcript
--TSL:3
Zfp94-203ENSMUST00000126580.8600No protein-
 
Retained intron
--TSL:3
Zfp94-205ENSMUST00000146817.2574No protein-
 
Retained intron
--TSL:2
Description

RNA binding motif protein 5 [Source:MGI Symbol;Acc:MGI:1933204]

Gene Synonyms

D030069N10Rik

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Rbm5-214ENSMUST00000182659.83205815aaENSMUSP00000138379.2
 
Protein coding
CCDS23506Q91YE7-1 GENCODE basicAPPRIS P2TSL:1
Rbm5-201ENSMUST00000035199.133064814aaENSMUSP00000035199.7
 
Protein coding
-Q91YE7-2 GENCODE basicAPPRIS ALT1TSL:5
Rbm5-204ENSMUST00000182022.8869137aaENSMUSP00000138390.2
 
Protein coding
-S4R1V5 TSL:5CDS 3' incomplete
Rbm5-208ENSMUST00000182304.8850251aaENSMUSP00000138380.2
 
Protein coding
-S4R1U7 TSL:3CDS 3' incomplete
Rbm5-205ENSMUST00000182026.2835154aaENSMUSP00000138526.2
 
Protein coding
-S4R273 TSL:2CDS 5' incomplete
Rbm5-218ENSMUST00000183248.3781115aaENSMUSP00000138294.3
 
Protein coding
-S4R1N4 TSL:5CDS 3' incomplete
Rbm5-222ENSMUST00000194400.2322101aaENSMUSP00000142324.2
 
Protein coding
-A0A0A6YY86 TSL:3CDS 5' incomplete
Rbm5-210ENSMUST00000182371.82986150aaENSMUSP00000138119.2
 
Nonsense mediated decay
-S4R184 TSL:1
Rbm5-211ENSMUST00000182421.81704115aaENSMUSP00000138778.2
 
Nonsense mediated decay
-S4R2T4 TSL:1
Rbm5-221ENSMUST00000193342.6896175aaENSMUSP00000141829.2
 
Nonsense mediated decay
-A0A0A6YX44 TSL:3CDS 5' incomplete
Rbm5-220ENSMUST00000192130.6784150aaENSMUSP00000142194.2
 
Nonsense mediated decay
-S4R184 TSL:3
Rbm5-219ENSMUST00000183307.86321No protein-
 
Retained intron
--TSL:1
Rbm5-215ENSMUST00000182792.24718No protein-
 
Retained intron
--TSL:NA
Rbm5-224ENSMUST00000194801.62691No protein-
 
Retained intron
--TSL:1
Rbm5-203ENSMUST00000182007.81939No protein-
 
Retained intron
--TSL:1
Rbm5-202ENSMUST00000181993.21775No protein-
 
Retained intron
--TSL:NA
Rbm5-213ENSMUST00000182518.21272No protein-
 
Retained intron
--TSL:1
Rbm5-206ENSMUST00000182073.8897No protein-
 
Retained intron
--TSL:2
Rbm5-209ENSMUST00000182332.2793No protein-
 
Retained intron
--TSL:2
Rbm5-207ENSMUST00000182215.2631No protein-
 
Retained intron
--TSL:3
Rbm5-212ENSMUST00000182422.7600No protein-
 
Retained intron
--TSL:2
Rbm5-217ENSMUST00000182856.8539No protein-
 
Retained intron
--TSL:3
Rbm5-223ENSMUST00000194682.2502No protein-
 
Retained intron
--TSL:3
Rbm5-216ENSMUST00000182836.2500No protein-
 
Retained intron
--TSL:3
Description

histone deacetylase 1 [Source:HGNC Symbol;Acc:HGNC:4852]

Gene Synonyms

GON-10, HD1, KDAC1, RPD3L1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
HDAC1-201ENST00000373548.82118482aaENSP00000362649.3
 
Protein coding
CCDS360Q13547 Q6IT96 NM_004964.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
HDAC1-202ENST00000428704.1664211aaENSP00000407859.1
 
Protein coding
-Q5TEE2 -TSL:2CDS 3' incomplete
HDAC1-210ENST00000490081.51047No protein-
 
Processed transcript
---TSL:3
HDAC1-203ENST00000463172.5895No protein-
 
Processed transcript
---TSL:2
HDAC1-208ENST00000482310.5779No protein-
 
Processed transcript
---TSL:5
HDAC1-207ENST00000481281.5721No protein-
 
Processed transcript
---TSL:5
HDAC1-205ENST00000472928.5532No protein-
 
Processed transcript
---TSL:2
HDAC1-206ENST00000476391.52409No protein-
 
Retained intron
---TSL:1
HDAC1-204ENST00000471488.1726No protein-
 
Retained intron
---TSL:5
HDAC1-209ENST00000484305.1561No protein-
 
Retained intron
---TSL:5
Description

testis expressed 41 [Source:HGNC Symbol;Acc:HGNC:48667]

Gene Synonyms

DKFZp686O1327, LINC00953

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
TEX41-306ENST00000653533.11308No protein-
 
lncRNA
--Ensembl Canonical
TEX41-207ENST00000445791.54635No protein-
 
lncRNA
--TSL:1
TEX41-360ENST00000665824.13337No protein-
 
lncRNA
---
TEX41-364ENST00000666826.12611No protein-
 
lncRNA
--GENCODE basic
TEX41-366ENST00000666917.12169No protein-
 
lncRNA
---
TEX41-210ENST00000451774.52098No protein-
 
lncRNA
--GENCODE basicTSL:1
TEX41-345ENST00000662233.11971No protein-
 
lncRNA
--GENCODE basic
TEX41-327ENST00000658019.11901No protein-
 
lncRNA
---
TEX41-311ENST00000654298.11869No protein-
 
lncRNA
--GENCODE basic
TEX41-383ENST00000670125.11629No protein-
 
lncRNA
--GENCODE basic
TEX41-389ENST00000671649.11612No protein-
 
lncRNA
--GENCODE basic
TEX41-348ENST00000663282.11557No protein-
 
lncRNA
--GENCODE basic
TEX41-326ENST00000657732.11515No protein-
 
lncRNA
---
TEX41-304ENST00000652981.11508No protein-
 
lncRNA
--GENCODE basic
TEX41-341ENST00000661398.11505No protein-
 
lncRNA
--GENCODE basic
TEX41-379ENST00000669646.11482No protein-
 
lncRNA
---
TEX41-373ENST00000667984.11476No protein-
 
lncRNA
---
TEX41-333ENST00000660009.11467No protein-
 
lncRNA
--GENCODE basic
TEX41-316ENST00000655187.11462No protein-
 
lncRNA
---
TEX41-334ENST00000660169.11438No protein-
 
lncRNA
--GENCODE basic
TEX41-329ENST00000658898.11433No protein-
 
lncRNA
--GENCODE basic
TEX41-357ENST00000665081.11430No protein-
 
lncRNA
--GENCODE basic
TEX41-314ENST00000654442.11425No protein-
 
lncRNA
--GENCODE basic
TEX41-343ENST00000661697.11424No protein-
 
lncRNA
---
TEX41-230ENST00000599187.61423No protein-
 
lncRNA
--TSL:5
TEX41-375ENST00000668319.11420No protein-
 
lncRNA
---
TEX41-359ENST00000665244.11415No protein-
 
lncRNA
---
TEX41-365ENST00000666890.11390No protein-
 
lncRNA
---
TEX41-309ENST00000653941.11385No protein-
 
lncRNA
---
TEX41-322ENST00000657187.11368No protein-
 
lncRNA
---
TEX41-307ENST00000653630.11360No protein-
 
lncRNA
---
TEX41-224ENST00000597655.61348No protein-
 
lncRNA
--TSL:5
TEX41-308ENST00000653910.11346No protein-
 
lncRNA
---
TEX41-206ENST00000432608.61337No protein-
 
lncRNA
--TSL:3
TEX41-323ENST00000657526.11335No protein-
 
lncRNA
--GENCODE basic
TEX41-358ENST00000665226.11331No protein-
 
lncRNA
---
TEX41-320ENST00000656881.11327No protein-
 
lncRNA
---
TEX41-353ENST00000664611.11316No protein-
 
lncRNA
---
TEX41-361ENST00000666180.11307No protein-
 
lncRNA
--GENCODE basic
TEX41-352ENST00000664258.11290No protein-
 
lncRNA
---
TEX41-331ENST00000659777.11288No protein-
 
lncRNA
---
TEX41-385ENST00000670869.11273No protein-
 
lncRNA
---
TEX41-367ENST00000666949.11260No protein-
 
lncRNA
---
TEX41-220ENST00000596747.61246No protein-
 
lncRNA
--TSL:5
TEX41-363ENST00000666675.11219No protein-
 
lncRNA
---
TEX41-374ENST00000668187.11215No protein-
 
lncRNA
---
TEX41-340ENST00000661327.11214No protein-
 
lncRNA
---
TEX41-387ENST00000671502.11198No protein-
 
lncRNA
--GENCODE basic
TEX41-362ENST00000666650.11195No protein-
 
lncRNA
---
TEX41-342ENST00000661482.11191No protein-
 
lncRNA
--GENCODE basic
TEX41-330ENST00000659773.11179No protein-
 
lncRNA
---
TEX41-354ENST00000664649.11175No protein-
 
lncRNA
---
TEX41-339ENST00000661187.11174No protein-
 
lncRNA
---
TEX41-344ENST00000661920.11168No protein-
 
lncRNA
---
TEX41-380ENST00000669793.11162No protein-
 
lncRNA
---
TEX41-266ENST00000627991.31153No protein-
 
lncRNA
--TSL:5
TEX41-291ENST00000630139.21146No protein-
 
lncRNA
--TSL:5
TEX41-268ENST00000628136.31136No protein-
 
lncRNA
--TSL:5
TEX41-222ENST00000597173.51134No protein-
 
lncRNA
--GENCODE basicTSL:1
TEX41-317ENST00000655563.11133No protein-
 
lncRNA
---
TEX41-325ENST00000657684.11124No protein-
 
lncRNA
---
TEX41-282ENST00000629218.21119No protein-
 
lncRNA
--TSL:5
TEX41-372ENST00000667905.11119No protein-
 
lncRNA
---
TEX41-338ENST00000661094.11115No protein-
 
lncRNA
---
TEX41-244ENST00000625362.31114No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-319ENST00000656353.11113No protein-
 
lncRNA
---
TEX41-378ENST00000669172.11111No protein-
 
lncRNA
---
TEX41-377ENST00000668441.11109No protein-
 
lncRNA
---
TEX41-313ENST00000654410.11104No protein-
 
lncRNA
---
TEX41-332ENST00000659810.11086No protein-
 
lncRNA
---
TEX41-301ENST00000631167.31079No protein-
 
lncRNA
--TSL:5
TEX41-376ENST00000668424.11076No protein-
 
lncRNA
--GENCODE basic
TEX41-223ENST00000597469.51073No protein-
 
lncRNA
--TSL:5
TEX41-349ENST00000663303.11069No protein-
 
lncRNA
---
TEX41-386ENST00000671290.11060No protein-
 
lncRNA
---
TEX41-370ENST00000667704.11046No protein-
 
lncRNA
---
TEX41-350ENST00000663323.11045No protein-
 
lncRNA
---
TEX41-324ENST00000657624.11045No protein-
 
lncRNA
---
TEX41-302ENST00000631271.31042No protein-
 
lncRNA
--TSL:5
TEX41-335ENST00000660660.11024No protein-
 
lncRNA
---
TEX41-286ENST00000629613.31023No protein-
 
lncRNA
--TSL:5
TEX41-321ENST00000656937.11017No protein-
 
lncRNA
---
TEX41-310ENST00000653959.11016No protein-
 
lncRNA
---
TEX41-229ENST00000599072.61012No protein-
 
lncRNA
--TSL:5
TEX41-275ENST00000628688.21008No protein-
 
lncRNA
--TSL:5
TEX41-371ENST00000667781.11000No protein-
 
lncRNA
---
TEX41-233ENST00000600679.5996No protein-
 
lncRNA
--TSL:5
TEX41-271ENST00000628213.2993No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-235ENST00000601578.5987No protein-
 
lncRNA
--TSL:5
TEX41-346ENST00000662271.1987No protein-
 
lncRNA
---
TEX41-252ENST00000626325.3982No protein-
 
lncRNA
--TSL:5
TEX41-382ENST00000670099.1975No protein-
 
lncRNA
---
TEX41-381ENST00000670002.1948No protein-
 
lncRNA
---
TEX41-315ENST00000655165.1948No protein-
 
lncRNA
--GENCODE basic
TEX41-225ENST00000597670.5944No protein-
 
lncRNA
--TSL:5
TEX41-300ENST00000631075.2938No protein-
 
lncRNA
--TSL:5
TEX41-232ENST00000600064.5928No protein-
 
lncRNA
--TSL:5
TEX41-228ENST00000598659.5927No protein-
 
lncRNA
--TSL:5
TEX41-296ENST00000630709.2926No protein-
 
lncRNA
--TSL:5
TEX41-303ENST00000650896.1914No protein-
 
lncRNA
---
TEX41-347ENST00000662863.1914No protein-
 
lncRNA
---
TEX41-250ENST00000626197.2904No protein-
 
lncRNA
--TSL:5
TEX41-237ENST00000602108.5897No protein-
 
lncRNA
--TSL:5
TEX41-388ENST00000671637.1897No protein-
 
lncRNA
---
TEX41-249ENST00000626133.2895No protein-
 
lncRNA
--TSL:5
TEX41-262ENST00000627545.2886No protein-
 
lncRNA
--TSL:5
TEX41-216ENST00000596230.5883No protein-
 
lncRNA
--TSL:5
TEX41-218ENST00000596540.5882No protein-
 
lncRNA
--TSL:5
TEX41-259ENST00000627195.2882No protein-
 
lncRNA
--TSL:5
TEX41-248ENST00000625887.2881No protein-
 
lncRNA
--TSL:5
TEX41-355ENST00000664679.1877No protein-
 
lncRNA
---
TEX41-294ENST00000630651.2874No protein-
 
lncRNA
--TSL:5
TEX41-276ENST00000628775.3874No protein-
 
lncRNA
--TSL:5
TEX41-328ENST00000658352.1866No protein-
 
lncRNA
---
TEX41-351ENST00000664055.1865No protein-
 
lncRNA
---
TEX41-356ENST00000664937.1864No protein-
 
lncRNA
---
TEX41-246ENST00000625651.2841No protein-
 
lncRNA
--TSL:5
TEX41-211ENST00000594471.5840No protein-
 
lncRNA
--TSL:5
TEX41-299ENST00000630959.2838No protein-
 
lncRNA
--TSL:5
TEX41-264ENST00000627757.2837No protein-
 
lncRNA
--TSL:5
TEX41-318ENST00000656317.1825No protein-
 
lncRNA
---
TEX41-283ENST00000629251.2813No protein-
 
lncRNA
--TSL:5
TEX41-289ENST00000630029.2806No protein-
 
lncRNA
--TSL:5
TEX41-337ENST00000660904.1803No protein-
 
lncRNA
---
TEX41-245ENST00000625557.1801No protein-
 
lncRNA
--TSL:5
TEX41-290ENST00000630122.2799No protein-
 
lncRNA
--TSL:5
TEX41-273ENST00000628422.2796No protein-
 
lncRNA
--TSL:5
TEX41-295ENST00000630691.2792No protein-
 
lncRNA
--TSL:5
TEX41-368ENST00000666980.1788No protein-
 
lncRNA
---
TEX41-369ENST00000667423.1777No protein-
 
lncRNA
---
TEX41-336ENST00000660827.1776No protein-
 
lncRNA
---
TEX41-226ENST00000597893.5770No protein-
 
lncRNA
--TSL:5
TEX41-209ENST00000451478.6766No protein-
 
lncRNA
--TSL:2
TEX41-227ENST00000598248.5765No protein-
 
lncRNA
--TSL:5
TEX41-203ENST00000420472.1765No protein-
 
lncRNA
--TSL:3
TEX41-292ENST00000630246.2762No protein-
 
lncRNA
--TSL:5
TEX41-215ENST00000596034.6751No protein-
 
lncRNA
--TSL:5
TEX41-269ENST00000628167.2743No protein-
 
lncRNA
--TSL:5
TEX41-236ENST00000602041.5742No protein-
 
lncRNA
--TSL:5
TEX41-312ENST00000654361.1721No protein-
 
lncRNA
---
TEX41-263ENST00000627675.2719No protein-
 
lncRNA
--TSL:5
TEX41-384ENST00000670681.1719No protein-
 
lncRNA
---
TEX41-238ENST00000604253.5709No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-284ENST00000629460.2707No protein-
 
lncRNA
--TSL:5
TEX41-265ENST00000627785.2704No protein-
 
lncRNA
--TSL:5
TEX41-234ENST00000601277.5700No protein-
 
lncRNA
--TSL:5
TEX41-214ENST00000595686.5693No protein-
 
lncRNA
--TSL:5
TEX41-258ENST00000627051.2691No protein-
 
lncRNA
--TSL:5
TEX41-247ENST00000625671.2690No protein-
 
lncRNA
--TSL:5
TEX41-293ENST00000630451.2690No protein-
 
lncRNA
--TSL:5
TEX41-288ENST00000629997.2689No protein-
 
lncRNA
--TSL:5
TEX41-278ENST00000628985.2688No protein-
 
lncRNA
--TSL:5
TEX41-285ENST00000629585.2680No protein-
 
lncRNA
--TSL:5
TEX41-257ENST00000626952.2679No protein-
 
lncRNA
--TSL:5
TEX41-297ENST00000630724.2677No protein-
 
lncRNA
--TSL:5
TEX41-201ENST00000414195.6674No protein-
 
lncRNA
--TSL:3
TEX41-272ENST00000628237.2672No protein-
 
lncRNA
--TSL:5
TEX41-217ENST00000596278.5669No protein-
 
lncRNA
--TSL:5
TEX41-281ENST00000629194.2661No protein-
 
lncRNA
--TSL:5
TEX41-277ENST00000628794.2654No protein-
 
lncRNA
--TSL:5
TEX41-221ENST00000596970.5646No protein-
 
lncRNA
--TSL:5
TEX41-267ENST00000628057.2645No protein-
 
lncRNA
--TSL:5
TEX41-251ENST00000626239.2640No protein-
 
lncRNA
--TSL:5
TEX41-219ENST00000596589.5636No protein-
 
lncRNA
--TSL:5
TEX41-260ENST00000627419.2631No protein-
 
lncRNA
--TSL:5
TEX41-212ENST00000594626.5627No protein-
 
lncRNA
--TSL:5
TEX41-287ENST00000629631.2613No protein-
 
lncRNA
--TSL:5
TEX41-305ENST00000653186.1613No protein-
 
lncRNA
---
TEX41-255ENST00000626404.1610No protein-
 
lncRNA
--TSL:5
TEX41-279ENST00000629149.1609No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-202ENST00000414256.5604No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-213ENST00000594837.3602No protein-
 
lncRNA
--TSL:5
TEX41-241ENST00000608652.5594No protein-
 
lncRNA
--TSL:5
TEX41-240ENST00000608432.5594No protein-
 
lncRNA
--TSL:5
TEX41-280ENST00000629185.2591No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-261ENST00000627497.2558No protein-
 
lncRNA
--TSL:5
TEX41-242ENST00000609705.5552No protein-
 
lncRNA
--TSL:5
TEX41-208ENST00000451027.5546No protein-
 
lncRNA
--TSL:4
TEX41-239ENST00000605238.3543No protein-
 
lncRNA
--TSL:5
TEX41-205ENST00000431734.5529No protein-
 
lncRNA
--TSL:4
TEX41-270ENST00000628180.2515No protein-
 
lncRNA
--TSL:5
TEX41-204ENST00000423031.1491No protein-
 
lncRNA
--GENCODE basicTSL:4
TEX41-274ENST00000628611.2423No protein-
 
lncRNA
--TSL:5
TEX41-254ENST00000626394.2423No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-298ENST00000630732.2380No protein-
 
lncRNA
--TSL:5
TEX41-256ENST00000626411.2368No protein-
 
lncRNA
--TSL:5
TEX41-231ENST00000599358.5366No protein-
 
lncRNA
--TSL:5
TEX41-243ENST00000614173.1190No protein-
 
lncRNA
--TSL:5
TEX41-253ENST00000626363.2144No protein-
 
lncRNA
--TSL:5
Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,331 bps,

Version

ENST00000665226.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x2f24d310)