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Description

MUC20 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:53807]

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000629807.2MUC20-OT1-319466No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
ENST00000445430.5MUC20-OT1-2124208No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000445707.3MUC20-OT1-2132363No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000429897.5MUC20-OT1-2072131No protein-
 
lncRNA
--TSL:2
ENST00000597482.5MUC20-OT1-2311476No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000453324.5MUC20-OT1-2191439No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000457233.5MUC20-OT1-2211279No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000627562.2MUC20-OT1-2931184No protein-
 
lncRNA
--TSL:5
ENST00000451982.6MUC20-OT1-2171161No protein-
 
lncRNA
--TSL:5
ENST00000631189.2MUC20-OT1-3361156No protein-
 
lncRNA
--TSL:5
ENST00000601955.5MUC20-OT1-2431123No protein-
 
lncRNA
--TSL:5
ENST00000600197.1MUC20-OT1-2381090No protein-
 
lncRNA
--TSL:5
ENST00000593988.2MUC20-OT1-2221072No protein-
 
lncRNA
--TSL:5
ENST00000626617.2MUC20-OT1-2741014No protein-
 
lncRNA
--TSL:5
ENST00000598992.5MUC20-OT1-2351005No protein-
 
lncRNA
--TSL:5
ENST00000627609.1MUC20-OT1-294992No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000625358.2MUC20-OT1-254962No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000608737.3MUC20-OT1-247956No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630243.2MUC20-OT1-324955No protein-
 
lncRNA
--TSL:5
ENST00000594101.3MUC20-OT1-223955No protein-
 
lncRNA
--TSL:5
ENST00000630863.2MUC20-OT1-331954No protein-
 
lncRNA
--TSL:5
ENST00000626220.2MUC20-OT1-268932No protein-
 
lncRNA
--TSL:5
ENST00000627767.1MUC20-OT1-297929No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000630417.2MUC20-OT1-327918No protein-
 
lncRNA
--TSL:5
ENST00000625776.2MUC20-OT1-259911No protein-
 
lncRNA
--TSL:5
ENST00000625632.2MUC20-OT1-257898No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628547.2MUC20-OT1-308882No protein-
 
lncRNA
--TSL:5
ENST00000627502.2MUC20-OT1-290874No protein-
 
lncRNA
--TSL:5
ENST00000627555.2MUC20-OT1-292874No protein-
 
lncRNA
--TSL:5
ENST00000629823.2MUC20-OT1-320869No protein-
 
lncRNA
--TSL:5
ENST00000420851.6MUC20-OT1-204868No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628439.2MUC20-OT1-306864No protein-
 
lncRNA
--TSL:5
ENST00000596584.4MUC20-OT1-229863No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626569.2MUC20-OT1-272857No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000600527.5MUC20-OT1-241852No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626870.2MUC20-OT1-278851No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000627471.2MUC20-OT1-289851No protein-
 
lncRNA
--TSL:5
ENST00000631087.1MUC20-OT1-334848No protein-
 
lncRNA
--TSL:5
ENST00000627152.2MUC20-OT1-285846No protein-
 
lncRNA
--TSL:5
ENST00000626007.2MUC20-OT1-263839No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000597871.1MUC20-OT1-233839No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000629990.1MUC20-OT1-321806No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000625338.1MUC20-OT1-253804No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630830.1MUC20-OT1-330795No protein-
 
lncRNA
--TSL:5
ENST00000628668.2MUC20-OT1-310795No protein-
 
lncRNA
--TSL:5
ENST00000627863.2MUC20-OT1-298793No protein-
 
lncRNA
--TSL:5
ENST00000626089.2MUC20-OT1-264792No protein-
 
lncRNA
--TSL:5
ENST00000630197.2MUC20-OT1-323783No protein-
 
lncRNA
--TSL:5
ENST00000599448.5MUC20-OT1-236780No protein-
 
lncRNA
--TSL:5
ENST00000628392.2MUC20-OT1-305775No protein-
 
lncRNA
--TSL:5
ENST00000628301.2MUC20-OT1-304772No protein-
 
lncRNA
--TSL:5
ENST00000631288.2MUC20-OT1-338764No protein-
 
lncRNA
--TSL:5
ENST00000455807.2MUC20-OT1-220764No protein-
 
lncRNA
--TSL:3
ENST00000629721.2MUC20-OT1-318755No protein-
 
lncRNA
--TSL:5
ENST00000631366.2MUC20-OT1-342751No protein-
 
lncRNA
--TSL:5
ENST00000594976.5MUC20-OT1-226750No protein-
 
lncRNA
--TSL:5
ENST00000602127.5MUC20-OT1-244749No protein-
 
lncRNA
--TSL:5
ENST00000630663.1MUC20-OT1-328746No protein-
 
lncRNA
--TSL:5
ENST00000601648.5MUC20-OT1-242745No protein-
 
lncRNA
--TSL:3
ENST00000626969.2MUC20-OT1-281745No protein-
 
lncRNA
--TSL:5
ENST00000594446.5MUC20-OT1-224740No protein-
 
lncRNA
--TSL:5
ENST00000630874.2MUC20-OT1-332738No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000432601.3MUC20-OT1-210732No protein-
 
lncRNA
--TSL:5
ENST00000597034.5MUC20-OT1-230731No protein-
 
lncRNA
--TSL:5
ENST00000627363.2MUC20-OT1-288731No protein-
 
lncRNA
--TSL:5
ENST00000414625.6MUC20-OT1-201729No protein-
 
lncRNA
--TSL:5
ENST00000594715.5MUC20-OT1-225729No protein-
 
lncRNA
--TSL:5
ENST00000600288.5MUC20-OT1-239728No protein-
 
lncRNA
--TSL:5
ENST00000599566.5MUC20-OT1-237718No protein-
 
lncRNA
--TSL:5
ENST00000630387.2MUC20-OT1-325714No protein-
 
lncRNA
--TSL:5
ENST00000615493.4MUC20-OT1-250712No protein-
 
lncRNA
--TSL:5
ENST00000627297.2MUC20-OT1-286708No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000595086.5MUC20-OT1-227704No protein-
 
lncRNA
--TSL:5
ENST00000631105.2MUC20-OT1-335702No protein-
 
lncRNA
--TSL:5
ENST00000620737.3MUC20-OT1-252702No protein-
 
lncRNA
--TSL:5
ENST00000631359.2MUC20-OT1-341702No protein-
 
lncRNA
--TSL:5
ENST00000626979.2MUC20-OT1-282698No protein-
 
lncRNA
--TSL:5
ENST00000417704.5MUC20-OT1-202694No protein-
 
lncRNA
--TSL:3
ENST00000625824.2MUC20-OT1-260692No protein-
 
lncRNA
--TSL:5
ENST00000626156.1MUC20-OT1-266683No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000602175.5MUC20-OT1-245673No protein-
 
lncRNA
--TSL:5
ENST00000629686.2MUC20-OT1-317669No protein-
 
lncRNA
--TSL:5
ENST00000628125.2MUC20-OT1-302668No protein-
 
lncRNA
--TSL:5
ENST00000629537.2MUC20-OT1-316666No protein-
 
lncRNA
--TSL:5
ENST00000595382.5MUC20-OT1-228659No protein-
 
lncRNA
--TSL:5
ENST00000626346.2MUC20-OT1-270652No protein-
 
lncRNA
--TSL:5
ENST00000626872.2MUC20-OT1-279649No protein-
 
lncRNA
--TSL:5
ENST00000626233.2MUC20-OT1-269644No protein-
 
lncRNA
--TSL:5
ENST00000627512.2MUC20-OT1-291642No protein-
 
lncRNA
--TSL:5
ENST00000627993.2MUC20-OT1-299633No protein-
 
lncRNA
--TSL:5
ENST00000628823.2MUC20-OT1-312616No protein-
 
lncRNA
--TSL:5
ENST00000625971.2MUC20-OT1-262615No protein-
 
lncRNA
--TSL:5
ENST00000625383.2MUC20-OT1-255612No protein-
 
lncRNA
--TSL:5
ENST00000626706.1MUC20-OT1-276608No protein-
 
lncRNA
--TSL:5
ENST00000630675.2MUC20-OT1-329608No protein-
 
lncRNA
--TSL:5
ENST00000618708.3MUC20-OT1-251606No protein-
 
lncRNA
--TSL:5
ENST00000451228.5MUC20-OT1-216604No protein-
 
lncRNA
--TSL:3
ENST00000600382.5MUC20-OT1-240599No protein-
 
lncRNA
--TSL:5
ENST00000626904.2MUC20-OT1-280598No protein-
 
lncRNA
--TSL:5
ENST00000612098.4MUC20-OT1-248592No protein-
 
lncRNA
--TSL:5
ENST00000446521.1MUC20-OT1-214584No protein-
 
lncRNA
--TSL:4
ENST00000630170.2MUC20-OT1-322584No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000452844.5MUC20-OT1-218583No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000628053.2MUC20-OT1-301582No protein-
 
lncRNA
--TSL:5
ENST00000597982.5MUC20-OT1-234579No protein-
 
lncRNA
--TSL:5
ENST00000597662.5MUC20-OT1-232570No protein-
 
lncRNA
--TSL:5
ENST00000630415.2MUC20-OT1-326560No protein-
 
lncRNA
--TSL:5
ENST00000628982.1MUC20-OT1-314554No protein-
 
lncRNA
--TSL:5
ENST00000628195.2MUC20-OT1-303552No protein-
 
lncRNA
--TSL:5
ENST00000626585.2MUC20-OT1-273544No protein-
 
lncRNA
--TSL:5
ENST00000420459.5MUC20-OT1-203543No protein-
 
lncRNA
--TSL:2
ENST00000628508.2MUC20-OT1-307542No protein-
 
lncRNA
--TSL:5
ENST00000425425.1MUC20-OT1-206525No protein-
 
lncRNA
--TSL:2
ENST00000438608.5MUC20-OT1-211525No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000631352.2MUC20-OT1-340523No protein-
 
lncRNA
--TSL:5
ENST00000626566.2MUC20-OT1-271521No protein-
 
lncRNA
--TSL:5
ENST00000627356.2MUC20-OT1-287519No protein-
 
lncRNA
--TSL:5
ENST00000628003.2MUC20-OT1-300511No protein-
 
lncRNA
--TSL:5
ENST00000626852.2MUC20-OT1-277511No protein-
 
lncRNA
--TSL:5
ENST00000627718.2MUC20-OT1-296510No protein-
 
lncRNA
--TSL:5
ENST00000631345.2MUC20-OT1-339507No protein-
 
lncRNA
--TSL:5
ENST00000432194.7MUC20-OT1-209503No protein-
 
lncRNA
--TSL:5
ENST00000627016.2MUC20-OT1-283503No protein-
 
lncRNA
--TSL:5
ENST00000625665.1MUC20-OT1-258496No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000628917.2MUC20-OT1-313490No protein-
 
lncRNA
--TSL:5
ENST00000431767.5MUC20-OT1-208486No protein-
 
lncRNA
--TSL:5
ENST00000625882.2MUC20-OT1-261484No protein-
 
lncRNA
--TSL:5
ENST00000615212.4MUC20-OT1-249473No protein-
 
lncRNA
--TSL:5
ENST00000625531.2MUC20-OT1-256468No protein-
 
lncRNA
--TSL:5
ENST00000628567.2MUC20-OT1-309463No protein-
 
lncRNA
--TSL:5
ENST00000627035.2MUC20-OT1-284458No protein-
 
lncRNA
--TSL:5
ENST00000631263.2MUC20-OT1-337455No protein-
 
lncRNA
--TSL:5
ENST00000631037.2MUC20-OT1-333451No protein-
 
lncRNA
--TSL:5
ENST00000424730.5MUC20-OT1-205431No protein-
 
lncRNA
--TSL:5
ENST00000628754.2MUC20-OT1-311430No protein-
 
lncRNA
--TSL:5
ENST00000608699.3MUC20-OT1-246415No protein-
 
lncRNA
--TSL:5
ENST00000627689.2MUC20-OT1-295409No protein-
 
lncRNA
--TSL:5
ENST00000451216.6MUC20-OT1-215405No protein-
 
lncRNA
--TSL:5
ENST00000629511.2MUC20-OT1-315393No protein-
 
lncRNA
--TSL:5
ENST00000626677.1MUC20-OT1-275378No protein-
 
lncRNA
--TSL:5
ENST00000626178.2MUC20-OT1-267342No protein-
 
lncRNA
--TSL:5
ENST00000626093.1MUC20-OT1-265229No protein-
 
lncRNA
--TSL:5
Description

methionyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:6898]

Gene Synonyms

CMT2U, MARS, MetRS, SPG70

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000262027.10MARS1-2012797900aaENSP00000262027.5
 
Protein coding
CCDS8942P56192-1 NM_004990.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000628866.2MARS1-233258395aaENSP00000486738.1
 
Protein coding
-F8W0M7 -GENCODE basicTSL:5
ENST00000552914.5MARS1-230734219aaENSP00000449787.1
 
Protein coding
-H0YIP0 -TSL:3CDS 5' incomplete
ENST00000552371.1MARS1-228699233aaENSP00000447914.1
 
Protein coding
-H0YHV5 -TSL:3CDS 5' and 3' incomplete
ENST00000547665.5MARS1-209670119aaENSP00000448910.1
 
Protein coding
-H0YI94 -TSL:2CDS 5' incomplete
ENST00000548944.1MARS1-21529458aaENSP00000449071.1
 
Protein coding
-H0YIC2 -TSL:3CDS 5' incomplete
ENST00000630571.2MARS1-23421671aaENSP00000485951.1
 
Protein coding
-F8VS26 -GENCODE basicTSL:5
ENST00000630803.1MARS1-23518360aaENSP00000486356.1
 
Protein coding
-F8VPL7 -GENCODE basicTSL:3
ENST00000537638.6MARS1-2033592546aaENSP00000446168.2
 
Nonsense mediated decay
-P56192-2 -TSL:2
ENST00000545888.6MARS1-2042979140aaENSP00000439307.2
 
Nonsense mediated decay
-F5H2V6 -TSL:5
ENST00000551892.1MARS1-22674860aaENSP00000450018.1
 
Nonsense mediated decay
-F8VPL7 -TSL:3
ENST00000551172.1MARS1-222699124aaENSP00000448378.1
 
Nonsense mediated decay
-H0YI27 -TSL:3CDS 5' incomplete
ENST00000551431.5MARS1-22355995aaENSP00000446729.1
 
Nonsense mediated decay
-F8W0M7 -TSL:4
ENST00000552499.5MARS1-22955581aaENSP00000447335.1
 
Nonsense mediated decay
-H0YHL6 -TSL:3CDS 5' incomplete
ENST00000549074.5MARS1-217532114aaENSP00000447258.1
 
Nonsense mediated decay
-F8VZZ9 -TSL:4
ENST00000547501.5MARS1-208510110aaENSP00000447145.1
 
Nonsense mediated decay
-F8W0S4 -TSL:2
ENST00000552007.5MARS1-22743471aaENSP00000448576.1
 
Nonsense mediated decay
-F8VS26 -TSL:3
ENST00000447721.6MARS1-2021328No protein-
 
Processed transcript
---TSL:2
ENST00000548674.5MARS1-213749No protein-
 
Processed transcript
---TSL:5
ENST00000548146.1MARS1-210558No protein-
 
Processed transcript
---TSL:4
ENST00000549133.1MARS1-218493No protein-
 
Processed transcript
---TSL:3
ENST00000548202.5MARS1-211796No protein-
 
Retained intron
---TSL:2
ENST00000549048.1MARS1-216755No protein-
 
Retained intron
---TSL:3
ENST00000550449.5MARS1-221739No protein-
 
Retained intron
---TSL:3
ENST00000553123.1MARS1-231724No protein-
 
Retained intron
---TSL:2
ENST00000546971.5MARS1-206711No protein-
 
Retained intron
---TSL:2
ENST00000551842.5MARS1-225662No protein-
 
Retained intron
---TSL:2
ENST00000553162.5MARS1-232575No protein-
 
Retained intron
---TSL:2
ENST00000547062.5MARS1-207571No protein-
 
Retained intron
---TSL:2
ENST00000548714.5MARS1-214567No protein-
 
Retained intron
---TSL:2
ENST00000546481.1MARS1-205561No protein-
 
Retained intron
---TSL:3
ENST00000548630.1MARS1-212557No protein-
 
Retained intron
---TSL:2
ENST00000551805.1MARS1-224479No protein-
 
Retained intron
---TSL:2
ENST00000549827.1MARS1-220465No protein-
 
Retained intron
---TSL:2
ENST00000549603.1MARS1-219402No protein-
 
Retained intron
---TSL:3
Description

tRNA splicing endonuclease subunit 54 [Source:HGNC Symbol;Acc:HGNC:27561]

Gene Synonyms

SEN54, SEN54L

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000333213.11TSEN54-2011937526aaENSP00000327487.6
 
Protein coding
CCDS11724Q7Z6J9-1 NM_207346.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000680999.1TSEN54-2192093597aaENSP00000504984.1
 
Protein coding
---GENCODE basic
ENST00000545228.3TSEN54-2032063562aaENSP00000438169.3
 
Protein coding
-J9JIH8 -GENCODE basicTSL:5
ENST00000434205.8TSEN54-2022010425aaENSP00000406559.4
 
Protein coding
-E7EN92 -GENCODE basicTSL:5
ENST00000679928.1TSEN54-2173048192aaENSP00000506071.1
 
Nonsense mediated decay
----
ENST00000681282.1TSEN54-2202895260aaENSP00000506339.1
 
Nonsense mediated decay
----
ENST00000679782.1TSEN54-2152082500aaENSP00000505995.1
 
Nonsense mediated decay
----
ENST00000679429.1TSEN54-2131921177aaENSP00000505403.1
 
Nonsense mediated decay
----
ENST00000583818.2TSEN54-211870177aaENSP00000461928.2
 
Nonsense mediated decay
-J3KRC5 -TSL:5
ENST00000583173.5TSEN54-208798178aaENSP00000463619.1
 
Nonsense mediated decay
-J3QLM6 -TSL:5
ENST00000679370.1TSEN54-2123414No protein-
 
Retained intron
----
ENST00000580013.6TSEN54-2073036No protein-
 
Retained intron
---TSL:4
ENST00000579449.2TSEN54-2062632No protein-
 
Retained intron
---TSL:2
ENST00000680528.1TSEN54-2182555No protein-
 
Retained intron
----
ENST00000679919.1TSEN54-2162138No protein-
 
Retained intron
----
ENST00000679443.1TSEN54-2141936No protein-
 
Retained intron
----
ENST00000577197.2TSEN54-2041100No protein-
 
Retained intron
---TSL:2
ENST00000578415.1TSEN54-205994No protein-
 
Retained intron
---TSL:3
ENST00000583454.1TSEN54-209733No protein-
 
Retained intron
---TSL:3
ENST00000583634.1TSEN54-210282No protein-
 
Retained intron
---TSL:2
Description

mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]

Gene Synonyms

GTBP

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000234420.11MSH6-20142651360aaENSP00000234420.5
 
Protein coding
CCDS1836P52701-1 NM_000179.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000614496.4MSH6-21241501058aaENSP00000477844.1
 
Protein coding
CCDS62907P52701-4 -GENCODE basicTSL:1
ENST00000538136.1MSH6-20940551058aaENSP00000438580.1
 
Protein coding
CCDS62907P52701-4 -GENCODE basicTSL:2
ENST00000540021.6MSH6-21038291230aaENSP00000446475.1
 
Protein coding
CCDS62906P52701-3 -GENCODE basicTSL:2
ENST00000652107.1MSH6-21376691261aaENSP00000498629.1
 
Protein coding
-A0A494C0M1 -GENCODE basic
ENST00000673637.1MSH6-21439591261aaENSP00000501310.1
 
Protein coding
-A0A494C0M1 -GENCODE basic
ENST00000455383.5MSH6-206578115aaENSP00000397484.1
 
Protein coding
-C9J8Y8 -TSL:5CDS 3' incomplete
ENST00000411819.1MSH6-202548151aaENSP00000406248.1
 
Protein coding
-C9J7Y7 -TSL:4CDS 3' incomplete
ENST00000420813.5MSH6-203491101aaENSP00000390382.1
 
Protein coding
-C9JH55 -TSL:4CDS 3' incomplete
ENST00000445503.5MSH6-2044158160aaENSP00000405294.1
 
Nonsense mediated decay
-F8WAX8 -TSL:1
ENST00000456246.1MSH6-207846104aaENSP00000410570.1
 
Nonsense mediated decay
-F8W7G9 -TSL:3
ENST00000607272.2MSH6-2112219No protein-
 
Processed transcript
---TSL:2
ENST00000493177.1MSH6-208813No protein-
 
Processed transcript
---TSL:3
ENST00000454137.5MSH6-205725No protein-
 
Processed transcript
---TSL:3
ENST00000673922.1MSH6-215573No protein-
 
Processed transcript
----
Description

adaptor related protein complex 3 subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:567]

Gene Synonyms

NAPTB

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000535359.6AP3B2-20337541101aaENSP00000440984.1
 
Protein coding
CCDS61737Q13367-4 NM_001278512.2MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:1
ENST00000542200.2AP3B2-2083921141aaENSP00000440719.1
 
Protein coding
CCDS86482F5GYB0 -GENCODE basicTSL:2
ENST00000668990.2AP3B2-22936971082aaENSP00000499235.1
 
Protein coding
CCDS45331Q13367-1 -GENCODE basicAPPRIS P2
ENST00000535348.5AP3B2-20232541050aaENSP00000438721.1
 
Protein coding
CCDS61736Q13367-3 -GENCODE basicTSL:1
ENST00000261722.8AP3B2-20137381088aaENSP00000261722.4
 
Protein coding
-A0A5F9UJV3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000652847.1AP3B2-21437141130aaENSP00000499785.1
 
Protein coding
-A0A590UKC4 -GENCODE basic
ENST00000642989.2AP3B2-21336831125aaENSP00000493485.1
 
Protein coding
-A0A2R8Y2A8 -GENCODE basic
ENST00000669930.1AP3B2-23134611025aaENSP00000499671.1
 
Protein coding
-A0A590UK04 -GENCODE basic
ENST00000666973.1AP3B2-2253420992aaENSP00000499288.1
 
Protein coding
-A0A590UJ60 -GENCODE basic
ENST00000535513.2AP3B2-2053395146aaENSP00000499258.1
 
Protein coding
-A0A590UJ44 -GENCODE basicTSL:2
ENST00000660624.1AP3B2-2172650718aaENSP00000499379.1
 
Protein coding
-A0A590UJE5 -GENCODE basic
ENST00000664460.1AP3B2-2202425528aaENSP00000499798.1
 
Protein coding
-A0A590UKD3 -GENCODE basic
ENST00000666055.1AP3B2-2221919508aaENSP00000499608.1
 
Protein coding
-A0A590UJW5 -GENCODE basic
ENST00000665513.1AP3B2-22184277aaENSP00000499710.1
 
Protein coding
-A0A590UK64 -CDS 5' incomplete
ENST00000666894.1AP3B2-224829144aaENSP00000499678.1
 
Protein coding
-A0A590UK30 -GENCODE basic
ENST00000541693.5AP3B2-207746193aaENSP00000441961.1
 
Protein coding
-F5GWU4 -TSL:3CDS 3' incomplete
ENST00000667758.1AP3B2-226464393aaENSP00000499318.1
 
Nonsense mediated decay
-A0A590UJ88 --
ENST00000681327.1AP3B2-2404042150aaENSP00000505423.1
 
Nonsense mediated decay
----
ENST00000657321.1AP3B2-2153698150aaENSP00000499716.1
 
Nonsense mediated decay
-A0A590UK69 --
ENST00000668385.1AP3B2-227358683aaENSP00000499544.1
 
Nonsense mediated decay
-A0A590UJS5 --
ENST00000661532.1AP3B2-2182750570aaENSP00000499583.1
 
Nonsense mediated decay
-A0A590UJU7 -CDS 5' incomplete
ENST00000668458.1AP3B2-2282736578aaENSP00000499573.1
 
Nonsense mediated decay
-A0A590UJU0 -CDS 5' incomplete
ENST00000537735.2AP3B2-2063663No protein-
 
Processed transcript
---TSL:1
ENST00000663651.1AP3B2-2193651No protein-
 
Processed transcript
----
ENST00000561455.5AP3B2-212532No protein-
 
Processed transcript
---TSL:4
ENST00000560529.1AP3B2-211498No protein-
 
Processed transcript
---TSL:3
ENST00000669880.1AP3B2-230466No protein-
 
Processed transcript
----
ENST00000679531.1AP3B2-2336210No protein-
 
Retained intron
----
ENST00000681452.1AP3B2-2415769No protein-
 
Retained intron
----
ENST00000681044.1AP3B2-2395079No protein-
 
Retained intron
----
ENST00000680492.1AP3B2-2365002No protein-
 
Retained intron
----
ENST00000681464.1AP3B2-2424875No protein-
 
Retained intron
----
ENST00000679950.1AP3B2-2354668No protein-
 
Retained intron
----
ENST00000680946.1AP3B2-2384573No protein-
 
Retained intron
----
ENST00000535385.6AP3B2-2044201No protein-
 
Retained intron
---TSL:5
ENST00000543938.6AP3B2-2094168No protein-
 
Retained intron
---TSL:2
ENST00000679388.1AP3B2-2324106No protein-
 
Retained intron
----
ENST00000680912.1AP3B2-2372939No protein-
 
Retained intron
----
ENST00000679891.1AP3B2-2342400No protein-
 
Retained intron
----
ENST00000559888.1AP3B2-210456No protein-
 
Retained intron
---TSL:2
ENST00000666672.1AP3B2-223433No protein-
 
Retained intron
----
ENST00000659252.1AP3B2-216358No protein-
 
Retained intron
----
Description

SPG7 matrix AAA peptidase subunit, paraplegin [Source:HGNC Symbol;Acc:HGNC:11237]

Gene Synonyms

CAR, CMAR, SPG5C

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000645818.2SPG7-2683076795aaENSP00000495795.2
 
Protein coding
CCDS10977Q9UQ90-1 NM_003119.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2
ENST00000341316.6SPG7-2022288489aaENSP00000341157.2
 
Protein coding
CCDS10978Q9UQ90-2 -GENCODE basicTSL:1
ENST00000647079.1SPG7-2903330659aaENSP00000495967.1
 
Protein coding
-A0A2R8Y726 -GENCODE basic
ENST00000645063.1SPG7-2623266809aaENSP00000493590.1
 
Protein coding
-A0A2R8Y3M4 -GENCODE basic
ENST00000646303.1SPG7-2773099751aaENSP00000494160.1
 
Protein coding
-A0A2R8Y4Y7 -GENCODE basic
ENST00000268704.7SPG7-2013026788aaENSP00000268704.3
 
Protein coding
-A0A2U3TZH1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000644781.1SPG7-2583012780aaENSP00000495473.1
 
Protein coding
-A0A2R8YFW4 -GENCODE basic
ENST00000644671.1SPG7-2552689681aaENSP00000495999.1
 
Protein coding
-A0A2R8Y7B8 -CDS 5' incomplete
ENST00000647032.1SPG7-2892644617aaENSP00000496047.1
 
Protein coding
-A0A2R8Y7E2 -CDS 5' incomplete
ENST00000645897.1SPG7-2712593641aaENSP00000495293.1
 
Protein coding
-A0A2R8Y6K2 -GENCODE basic
ENST00000643649.1SPG7-2402507758aaENSP00000494806.1
 
Protein coding
-A0A2R8YDQ1 -GENCODE basic
ENST00000646716.1SPG7-2852264493aaENSP00000495593.1
 
Protein coding
-A0A2R8YEH4 -GENCODE basic
ENST00000646445.1SPG7-2791890415aaENSP00000496434.1
 
Protein coding
-A0A2R8YGZ0 -CDS 5' incomplete
ENST00000643307.1SPG7-2341794507aaENSP00000495673.1
 
Protein coding
-A0A2R8Y729 -GENCODE basic
ENST00000567138.3SPG7-2161376114aaENSP00000483351.2
 
Protein coding
-A0A087X0F5 -TSL:2CDS 5' incomplete
ENST00000565891.2SPG7-21280781aaENSP00000495004.1
 
Protein coding
-A0A2R8YDW8 -TSL:2CDS 5' incomplete
ENST00000566371.6SPG7-214740238aaENSP00000454475.2
 
Protein coding
-H3BMP1 -TSL:3CDS 3' incomplete
ENST00000646263.1SPG7-2763401489aaENSP00000494119.1
 
Nonsense mediated decay
CCDS10978Q9UQ90-2 --
ENST00000646930.1SPG7-2874321463aaENSP00000495219.1
 
Nonsense mediated decay
-A0A2R8Y632 --
ENST00000644901.1SPG7-2594288278aaENSP00000493797.1
 
Nonsense mediated decay
-A0A2R8Y4L0 --
ENST00000644498.1SPG7-2534255456aaENSP00000496244.1
 
Nonsense mediated decay
-A0A2R8Y7N2 --
ENST00000642334.1SPG7-2264100421aaENSP00000496403.1
 
Nonsense mediated decay
-A0A2R8YFF4 -CDS 5' incomplete
ENST00000643954.1SPG7-2443938383aaENSP00000493826.1
 
Nonsense mediated decay
-A0A2R8Y4M0 -CDS 5' incomplete
ENST00000643668.1SPG7-2413851164aaENSP00000494903.1
 
Nonsense mediated decay
-A0A2R8YDU1 --
ENST00000646399.1SPG7-2783776358aaENSP00000495734.1
 
Nonsense mediated decay
-A0A2R8YG79 -CDS 5' incomplete
ENST00000643105.1SPG7-2323748485aaENSP00000495260.1
 
Nonsense mediated decay
-A0A2R8Y6E8 -CDS 5' incomplete
ENST00000645042.1SPG7-2613367511aaENSP00000493908.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000569820.6SPG7-222331370aaENSP00000454805.1
 
Nonsense mediated decay
-H3BNE4 -TSL:5CDS 5' incomplete
ENST00000646826.1SPG7-2863249511aaENSP00000495123.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000646531.1SPG7-2813216511aaENSP00000495185.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000645354.1SPG7-2642922250aaENSP00000494158.1
 
Nonsense mediated decay
-A0A2R8Y4L7 -CDS 5' incomplete
ENST00000643724.1SPG7-2422882258aaENSP00000496335.1
 
Nonsense mediated decay
-A0A2R8YGV4 --
ENST00000644210.1SPG7-2492817511aaENSP00000495675.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000647227.1SPG7-292267027aaENSP00000495783.1
 
Nonsense mediated decay
-A0A2R8YG90 -CDS 5' incomplete
ENST00000643345.1SPG7-2352665126aaENSP00000493982.1
 
Nonsense mediated decay
-A0A2R8YCU3 --
ENST00000646589.1SPG7-2832565128aaENSP00000494739.1
 
Nonsense mediated decay
-A0A2R8YDM8 --
ENST00000645886.1SPG7-2702537206aaENSP00000494111.1
 
Nonsense mediated decay
-A0A2R8Y4Z7 -CDS 5' incomplete
ENST00000644751.1SPG7-2572233320aaENSP00000493934.1
 
Nonsense mediated decay
-A0A2R8Y4M8 -CDS 5' incomplete
ENST00000566682.2SPG7-2151321357aaENSP00000461979.2
 
Nonsense mediated decay
-J3KRF6 -TSL:3CDS 5' incomplete
ENST00000564409.2SPG7-2101314181aaENSP00000495297.1
 
Nonsense mediated decay
-A0A2R8YFN9 -TSL:3CDS 5' incomplete
ENST00000642371.1SPG7-2271289208aaENSP00000495352.1
 
Nonsense mediated decay
-A0A2R8YFQ9 -CDS 5' incomplete
ENST00000645533.1SPG7-2661225339aaENSP00000495690.1
 
Nonsense mediated decay
-A0A2R8Y6Z7 --
ENST00000561911.5SPG7-2041025210aaENSP00000457387.1
 
Nonsense mediated decay
-H3BTY6 -TSL:5CDS 5' incomplete
ENST00000645258.1SPG7-263986107aaENSP00000496510.1
 
Nonsense mediated decay
-A0A2R8Y856 -CDS 5' incomplete
ENST00000643957.1SPG7-245936107aaENSP00000494246.1
 
Nonsense mediated decay
-A0A2R8Y530 -CDS 5' incomplete
ENST00000566221.5SPG7-213734106aaENSP00000457298.1
 
Nonsense mediated decay
-H3BTR8 -TSL:3CDS 5' incomplete
ENST00000643370.1SPG7-237726162aaENSP00000494895.1
 
Nonsense mediated decay
-A0A2R8Y617 -CDS 5' incomplete
ENST00000644044.1SPG7-24651656aaENSP00000494000.1
 
Nonsense mediated decay
-A0A2R8YDS3 -CDS 5' incomplete
ENST00000611189.2SPG7-2235423No protein-
 
Processed transcript
---TSL:NA
ENST00000643496.1SPG7-2392859No protein-
 
Processed transcript
----
ENST00000645842.1SPG7-2692742No protein-
 
Processed transcript
----
ENST00000643350.1SPG7-2362475No protein-
 
Processed transcript
----
ENST00000645742.1SPG7-2671677No protein-
 
Processed transcript
----
ENST00000568509.3SPG7-2191632No protein-
 
Processed transcript
---TSL:2
ENST00000563783.6SPG7-208931No protein-
 
Processed transcript
---TSL:3
ENST00000646707.1SPG7-284919No protein-
 
Processed transcript
----
ENST00000647239.1SPG7-293821No protein-
 
Processed transcript
----
ENST00000565370.1SPG7-211686No protein-
 
Processed transcript
---TSL:3
ENST00000643178.1SPG7-233669No protein-
 
Processed transcript
----
ENST00000569363.2SPG7-220617No protein-
 
Processed transcript
---TSL:2
ENST00000568151.1SPG7-217544No protein-
 
Processed transcript
---TSL:4
ENST00000642436.1SPG7-229422No protein-
 
Processed transcript
----
ENST00000644556.1SPG7-254323No protein-
 
Processed transcript
----
ENST00000644748.1SPG7-2566369No protein-
 
Retained intron
----
ENST00000643734.1SPG7-2434754No protein-
 
Retained intron
----
ENST00000644225.1SPG7-2504581No protein-
 
Retained intron
----
ENST00000647476.1SPG7-2954252No protein-
 
Retained intron
----
ENST00000645977.1SPG7-2744168No protein-
 
Retained intron
----
ENST00000644171.1SPG7-2483802No protein-
 
Retained intron
----
ENST00000561702.6SPG7-2033729No protein-
 
Retained intron
---TSL:2
ENST00000644281.1SPG7-2513728No protein-
 
Retained intron
----
ENST00000647302.1SPG7-2943692No protein-
 
Retained intron
----
ENST00000643409.1SPG7-2383475No protein-
 
Retained intron
----
ENST00000645392.1SPG7-2653384No protein-
 
Retained intron
----
ENST00000644464.1SPG7-2523119No protein-
 
Retained intron
----
ENST00000642226.1SPG7-2243110No protein-
 
Retained intron
----
ENST00000647123.1SPG7-2912991No protein-
 
Retained intron
----
ENST00000644930.1SPG7-2602969No protein-
 
Retained intron
----
ENST00000646958.1SPG7-2882931No protein-
 
Retained intron
----
ENST00000564047.2SPG7-2092893No protein-
 
Retained intron
---TSL:2
ENST00000646005.1SPG7-2752796No protein-
 
Retained intron
----
ENST00000647491.1SPG7-2962788No protein-
 
Retained intron
----
ENST00000642984.1SPG7-2312765No protein-
 
Retained intron
----
ENST00000645952.1SPG7-2732668No protein-
 
Retained intron
----
ENST00000646543.1SPG7-2822626No protein-
 
Retained intron
----
ENST00000645944.1SPG7-2722249No protein-
 
Retained intron
----
ENST00000642814.1SPG7-2302245No protein-
 
Retained intron
----
ENST00000562775.2SPG7-2061534No protein-
 
Retained intron
---TSL:1
ENST00000569720.2SPG7-2211403No protein-
 
Retained intron
---TSL:2
ENST00000642427.1SPG7-2281317No protein-
 
Retained intron
----
ENST00000642263.1SPG7-2251178No protein-
 
Retained intron
----
ENST00000646454.1SPG7-2801060No protein-
 
Retained intron
----
ENST00000563218.6SPG7-207976No protein-
 
Retained intron
---TSL:5
ENST00000561945.2SPG7-205803No protein-
 
Retained intron
---TSL:3
ENST00000644061.1SPG7-247526No protein-
 
Retained intron
----
ENST00000568205.1SPG7-218463No protein-
 
Retained intron
---TSL:2
Description

JPX transcript, XIST activator [Source:HGNC Symbol;Acc:HGNC:37191]

Gene Synonyms

DCBALD06, ENOX, LINC00183, NCRNA00183

Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000602772.5JPX-2071692No protein-
 
lncRNA
--Ensembl CanonicalTSL:1
ENST00000639185.1JPX-2129658No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000654005.1JPX-2195531No protein-
 
lncRNA
--GENCODE basic
ENST00000664637.1JPX-2565488No protein-
 
lncRNA
---
ENST00000657372.1JPX-2325467No protein-
 
lncRNA
---
ENST00000660856.1JPX-2465352No protein-
 
lncRNA
---
ENST00000667886.1JPX-2665350No protein-
 
lncRNA
---
ENST00000657179.1JPX-2315113No protein-
 
lncRNA
---
ENST00000670408.1JPX-2734686No protein-
 
lncRNA
---
ENST00000668590.1JPX-2694628No protein-
 
lncRNA
---
ENST00000655090.1JPX-2243950No protein-
 
lncRNA
---
ENST00000660836.1JPX-2443758No protein-
 
lncRNA
---
ENST00000660840.1JPX-2453571No protein-
 
lncRNA
---
ENST00000669149.1JPX-2703463No protein-
 
lncRNA
---
ENST00000653479.1JPX-2152753No protein-
 
lncRNA
---
ENST00000670506.1JPX-2762112No protein-
 
lncRNA
--GENCODE basic
ENST00000659254.1JPX-2372067No protein-
 
lncRNA
---
ENST00000668488.1JPX-2681947No protein-
 
lncRNA
---
ENST00000414209.6JPX-2011910No protein-
 
lncRNA
--TSL:2
ENST00000671207.1JPX-2811893No protein-
 
lncRNA
---
ENST00000670994.1JPX-2791852No protein-
 
lncRNA
---
ENST00000663027.1JPX-2521818No protein-
 
lncRNA
---
ENST00000655879.1JPX-2251817No protein-
 
lncRNA
---
ENST00000657910.1JPX-2341746No protein-
 
lncRNA
---
ENST00000671336.1JPX-2821746No protein-
 
lncRNA
---
ENST00000665032.1JPX-2571744No protein-
 
lncRNA
---
ENST00000667057.1JPX-2621726No protein-
 
lncRNA
---
ENST00000670685.1JPX-2771689No protein-
 
lncRNA
---
ENST00000661130.1JPX-2471675No protein-
 
lncRNA
---
ENST00000671476.1JPX-2831624No protein-
 
lncRNA
---
ENST00000640437.1JPX-2131620No protein-
 
lncRNA
--TSL:5
ENST00000658649.1JPX-2351561No protein-
 
lncRNA
---
ENST00000667937.1JPX-2671533No protein-
 
lncRNA
---
ENST00000659373.1JPX-2381525No protein-
 
lncRNA
---
ENST00000662120.1JPX-2491492No protein-
 
lncRNA
---
ENST00000659849.1JPX-2401492No protein-
 
lncRNA
---
ENST00000664295.1JPX-2541469No protein-
 
lncRNA
---
ENST00000670192.1JPX-2721452No protein-
 
lncRNA
---
ENST00000662239.1JPX-2501442No protein-
 
lncRNA
---
ENST00000653885.1JPX-2171422No protein-
 
lncRNA
---
ENST00000670464.1JPX-2741395No protein-
 
lncRNA
---
ENST00000670805.1JPX-2781395No protein-
 
lncRNA
---
ENST00000655994.1JPX-2261388No protein-
 
lncRNA
---
ENST00000654137.1JPX-2201377No protein-
 
lncRNA
---
ENST00000667645.1JPX-2651364No protein-
 
lncRNA
---
ENST00000659023.1JPX-2361316No protein-
 
lncRNA
---
ENST00000660546.1JPX-2431292No protein-
 
lncRNA
---
ENST00000669168.1JPX-2711292No protein-
 
lncRNA
---
ENST00000656263.1JPX-2271249No protein-
 
lncRNA
---
ENST00000665345.1JPX-2581244No protein-
 
lncRNA
---
ENST00000602938.6JPX-2101242No protein-
 
lncRNA
--TSL:2
ENST00000666059.1JPX-2591223No protein-
 
lncRNA
---
ENST00000661546.1JPX-2481217No protein-
 
lncRNA
---
ENST00000670503.1JPX-2751216No protein-
 
lncRNA
---
ENST00000653808.1JPX-2161213No protein-
 
lncRNA
---
ENST00000656624.1JPX-2291195No protein-
 
lncRNA
---
ENST00000602737.6JPX-2061166No protein-
 
lncRNA
--TSL:3
ENST00000654995.1JPX-2231162No protein-
 
lncRNA
---
ENST00000656509.1JPX-2281132No protein-
 
lncRNA
---
ENST00000671021.1JPX-2801109No protein-
 
lncRNA
---
ENST00000659622.1JPX-2391100No protein-
 
lncRNA
---
ENST00000659852.1JPX-2411096No protein-
 
lncRNA
---
ENST00000653069.1JPX-2141005No protein-
 
lncRNA
---
ENST00000654196.1JPX-221999No protein-
 
lncRNA
---
ENST00000664328.1JPX-255991No protein-
 
lncRNA
---
ENST00000667573.1JPX-264962No protein-
 
lncRNA
---
ENST00000662543.1JPX-251930No protein-
 
lncRNA
---
ENST00000666493.1JPX-261882No protein-
 
lncRNA
---
ENST00000667294.1JPX-263864No protein-
 
lncRNA
---
ENST00000660087.1JPX-242853No protein-
 
lncRNA
---
ENST00000671518.1JPX-284845No protein-
 
lncRNA
---
ENST00000602895.6JPX-208843No protein-
 
lncRNA
--TSL:3
ENST00000602294.6JPX-204782No protein-
 
lncRNA
--TSL:2
ENST00000602546.5JPX-205762No protein-
 
lncRNA
--TSL:3
ENST00000602920.6JPX-209753No protein-
 
lncRNA
--TSL:2
ENST00000653929.1JPX-218739No protein-
 
lncRNA
---
ENST00000666318.1JPX-260705No protein-
 
lncRNA
---
ENST00000602985.6JPX-211633No protein-
 
lncRNA
--TSL:3
ENST00000654374.1JPX-222606No protein-
 
lncRNA
---
ENST00000657638.1JPX-233561No protein-
 
lncRNA
---
ENST00000663470.1JPX-253554No protein-
 
lncRNA
---
ENST00000657096.1JPX-230488No protein-
 
lncRNA
---
ENST00000453317.1JPX-203483No protein-
 
lncRNA
--TSL:2
ENST00000415215.1JPX-202475No protein-
 
lncRNA
--TSL:5
Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,561 bps,

Version

ENST00000658649.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x31814d70)