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Description

tryptophan hydroxylase 1 [Source:MGI Symbol;Acc:MGI:98796]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Tph1-201ENSMUST00000049298.154562447aaENSMUSP00000037752.8
 
Protein coding
CCDS21280P17532 Q3UK52 GENCODE basicAPPRIS P1TSL:1
Tph1-202ENSMUST00000107669.91762447aaENSMUSP00000103296.3
 
Protein coding
CCDS21280P17532 Q3UK52 GENCODE basicAPPRIS P1TSL:1
Tph1-205ENSMUST00000168335.3578155aaENSMUSP00000128107.2
 
Protein coding
CCDS71970Q3TZH2 GENCODE basicTSL:1
Tph1-207ENSMUST00000170251.81217287aaENSMUSP00000132489.2
 
Nonsense mediated decay
-E9Q060 TSL:5
Tph1-208ENSMUST00000172386.81134205aaENSMUSP00000128727.2
 
Nonsense mediated decay
-F7BYX2 TSL:5CDS 5' incomplete
Tph1-204ENSMUST00000163468.3989No protein-
 
Retained intron
--TSL:1
Tph1-203ENSMUST00000110264.3869No protein-
 
Retained intron
--TSL:3
Tph1-206ENSMUST00000170045.2516No protein-
 
Retained intron
--TSL:3
Description

adenosine deaminase RNA specific [Source:HGNC Symbol;Acc:HGNC:225]

Gene Synonyms

ADAR1, G1P1, IFI4

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ADAR-202ENST00000368474.966101226aaENSP00000357459.4
 
Protein coding
CCDS1071P55265-1 NM_001111.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ADAR-211ENST00000648231.26971931aaENSP00000497555.1
 
Protein coding
CCDS30879P55265-5 -GENCODE basic
ADAR-225ENST00000680270.16664931aaENSP00000505532.1
 
Protein coding
CCDS30879--GENCODE basic
ADAR-216ENST00000649022.26631931aaENSP00000496896.2
 
Protein coding
CCDS30879A0A3B3IRQ9 -GENCODE basic
ADAR-212ENST00000648311.16539931aaENSP00000498137.1
 
Protein coding
CCDS30879P55265-5 -GENCODE basic
ADAR-201ENST00000368471.86519931aaENSP00000357456.3
 
Protein coding
CCDS30879P55265-5 -GENCODE basicTSL:1
ADAR-228ENST00000681056.16450931aaENSP00000506234.1
 
Protein coding
CCDS30879--GENCODE basic
ADAR-219ENST00000649724.16425931aaENSP00000497932.1
 
Protein coding
CCDS30879P55265-5 -GENCODE basic
ADAR-220ENST00000649749.16412931aaENSP00000497210.1
 
Protein coding
CCDS30879P55265-5 -GENCODE basic
ADAR-217ENST00000649042.16263931aaENSP00000497790.1
 
Protein coding
CCDS30879P55265-5 -GENCODE basic
ADAR-231ENST00000681683.14080931aaENSP00000506666.1
 
Protein coding
CCDS30879--GENCODE basic
ADAR-224ENST00000679899.16788912aaENSP00000505996.1
 
Protein coding
---GENCODE basic
ADAR-226ENST00000680305.164271165aaENSP00000506312.1
 
Protein coding
---GENCODE basic
ADAR-208ENST00000529168.263431200aaENSP00000431794.2
 
Protein coding
-P55265-2 -GENCODE basicAPPRIS ALT2TSL:5
ADAR-214ENST00000648871.11619350aaENSP00000497793.1
 
Protein coding
-A0A3B3ITG9 -CDS 3' incomplete
ADAR-233ENST00000681901.1696287aaENSP00000504883.1
 
Nonsense mediated decay
-A2IBT1 --
ADAR-218ENST00000649408.269151046aaENSP00000497386.2
 
Nonsense mediated decay
-A0A3B3ISU1 --
ADAR-213ENST00000648714.26832788aaENSP00000497434.2
 
Nonsense mediated decay
-A0A3B3ISX1 --
ADAR-229ENST00000681235.1675387aaENSP00000506606.1
 
Nonsense mediated decay
-A2IBT1 --
ADAR-221ENST00000679375.16386263aaENSP00000505887.1
 
Nonsense mediated decay
----
ADAR-204ENST00000471068.2583No protein-
 
Processed transcript
---TSL:4
ADAR-206ENST00000494866.1471No protein-
 
Processed transcript
---TSL:2
ADAR-207ENST00000526905.2302No protein-
 
Processed transcript
---TSL:3
ADAR-232ENST00000681786.17272No protein-
 
Retained intron
----
ADAR-222ENST00000679465.17272No protein-
 
Retained intron
----
ADAR-223ENST00000679805.17146No protein-
 
Retained intron
----
ADAR-215ENST00000649021.17112No protein-
 
Retained intron
----
ADAR-210ENST00000647682.26777No protein-
 
Retained intron
----
ADAR-230ENST00000681429.16078No protein-
 
Retained intron
----
ADAR-205ENST00000492630.25203No protein-
 
Retained intron
---TSL:2
ADAR-227ENST00000680472.12477No protein-
 
Retained intron
----
ADAR-203ENST00000463920.52347No protein-
 
Retained intron
---TSL:2
ADAR-209ENST00000534279.1849No protein-
 
Retained intron
---TSL:2
Description

SFI1 centrin binding protein [Source:HGNC Symbol;Acc:HGNC:29064]

Gene Synonyms

KIAA0542, PISD, PPP1R139

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SFI1-203ENST00000400288.740311242aaENSP00000383145.2
 
Protein coding
CCDS43004A8K8P3-1 NM_001007467.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:2
SFI1-229ENST00000540643.542261187aaENSP00000443025.1
 
Protein coding
CCDS58803A8K8P3-9 -GENCODE basicAPPRIS ALT2TSL:2
SFI1-208ENST00000432498.541621211aaENSP00000402679.1
 
Protein coding
CCDS43005A8K8P3-2 -GENCODE basicAPPRIS P4TSL:1
SFI1-204ENST00000400289.537391160aaENSP00000383146.1
 
Protein coding
CCDS58804A8K8P3-3 -GENCODE basicAPPRIS ALT2TSL:1
SFI1-209ENST00000443011.535791089aaENSP00000401199.1
 
Protein coding
-D3YTJ2 -GENCODE basicAPPRIS ALT2TSL:5
SFI1-206ENST00000417682.61817605aaENSP00000398871.2
 
Protein coding
-H0Y5I7 -TSL:5CDS 5' and 3' incomplete
SFI1-207ENST00000425671.171957aaENSP00000416931.1
 
Protein coding
-H0Y836 -TSL:3CDS 5' incomplete
SFI1-210ENST00000444859.544979aaENSP00000411793.1
 
Protein coding
-X6RJF9 -TSL:4CDS 3' incomplete
SFI1-211ENST00000450787.1448149aaENSP00000389364.1
 
Protein coding
-H7BZF3 -TSL:5CDS 5' and 3' incomplete
SFI1-212ENST00000452250.52625489aaENSP00000405541.1
 
Nonsense mediated decay
-H7C2F1 -TSL:2CDS 5' incomplete
SFI1-228ENST00000524296.52108389aaENSP00000430488.1
 
Nonsense mediated decay
-E5RJU6 -TSL:5
SFI1-205ENST00000411518.5656102aaENSP00000391339.1
 
Nonsense mediated decay
-F8WBU4 -TSL:3
SFI1-219ENST00000474741.5708No protein-
 
Processed transcript
---TSL:5
SFI1-216ENST00000465646.5596No protein-
 
Processed transcript
---TSL:4
SFI1-215ENST00000465437.5559No protein-
 
Processed transcript
---TSL:4
SFI1-217ENST00000466991.5545No protein-
 
Processed transcript
---TSL:5
SFI1-213ENST00000463436.1519No protein-
 
Processed transcript
---TSL:3
SFI1-218ENST00000467357.1372No protein-
 
Processed transcript
---TSL:3
SFI1-202ENST00000382162.75250No protein-
 
Retained intron
---TSL:2
SFI1-214ENST00000464333.53019No protein-
 
Retained intron
---TSL:2
SFI1-221ENST00000476577.51485No protein-
 
Retained intron
---TSL:1
SFI1-201ENST00000357852.31453No protein-
 
Retained intron
---TSL:1
SFI1-220ENST00000476010.5745No protein-
 
Retained intron
---TSL:4
SFI1-227ENST00000495107.1735No protein-
 
Retained intron
---TSL:3
SFI1-222ENST00000478887.1662No protein-
 
Retained intron
---TSL:4
SFI1-224ENST00000486708.1651No protein-
 
Retained intron
---TSL:2
SFI1-226ENST00000491973.1580No protein-
 
Retained intron
---TSL:4
SFI1-223ENST00000484806.1567No protein-
 
Retained intron
---TSL:4
SFI1-225ENST00000488883.5567No protein-
 
Retained intron
---TSL:3
Description

homeobox containing 1 [Source:HGNC Symbol;Acc:HGNC:26137]

Gene Synonyms

FLJ21616, HNF1LA, HOT1, PBHNF

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
HMBOX1-201ENST00000287701.153711420aaENSP00000287701.10
 
Protein coding
CCDS6071Q6NT76-1 NM_001135726.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
HMBOX1-203ENST00000397358.74082420aaENSP00000380516.3
 
Protein coding
CCDS6071Q6NT76-1 -GENCODE basicAPPRIS P4TSL:1
HMBOX1-212ENST00000558662.51765405aaENSP00000453211.1
 
Protein coding
CCDS83274Q6NT76-2 -GENCODE basicAPPRIS ALT1TSL:5
HMBOX1-211ENST00000524238.31731443aaENSP00000430110.1
 
Protein coding
CCDS83273Q6NT76-5 -GENCODE basicAPPRIS ALT1TSL:2
HMBOX1-210ENST00000523613.51730396aaENSP00000452827.1
 
Protein coding
-H0YKJ1 -GENCODE basicTSL:1
HMBOX1-202ENST00000355231.91694386aaENSP00000475196.1
 
Protein coding
-E5RGZ2 -GENCODE basicTSL:5
HMBOX1-206ENST00000519047.51551386aaENSP00000430059.1
 
Protein coding
-E5RGZ2 -GENCODE basicTSL:5
HMBOX1-215ENST00000560599.51426364aaENSP00000453185.1
 
Protein coding
-H0YLF2 -TSL:5CDS 3' incomplete
HMBOX1-207ENST00000519662.5811118aaENSP00000429767.1
 
Protein coding
-E5RHH9 -TSL:4CDS 3' incomplete
HMBOX1-208ENST00000521516.52216304aaENSP00000430238.1
 
Nonsense mediated decay
-Q6NT76-4 -TSL:2
HMBOX1-209ENST00000522468.181745aaENSP00000429854.1
 
Nonsense mediated decay
-H0YBM8 -TSL:3CDS 5' incomplete
HMBOX1-204ENST00000517386.1761No protein-
 
Processed transcript
---TSL:4
HMBOX1-213ENST00000560269.1569No protein-
 
Processed transcript
---TSL:4
HMBOX1-205ENST00000518080.2559No protein-
 
Processed transcript
---TSL:4
HMBOX1-216ENST00000561377.1307No protein-
 
Processed transcript
---TSL:5
HMBOX1-214ENST00000560357.5979No protein-
 
Retained intron
---TSL:2
Description

lymphocyte protein tyrosine kinase [Source:MGI Symbol;Acc:MGI:96756]

Gene Synonyms

Hck-3, p56

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Lck-201ENSMUST00000067240.112185509aaENSMUSP00000066209.5
 
Protein coding
CCDS18697P06240 GENCODE basicAPPRIS P1TSL:1
Lck-202ENSMUST00000102596.82111509aaENSMUSP00000099656.2
 
Protein coding
CCDS18697P06240 GENCODE basicAPPRIS P1TSL:1
Lck-208ENSMUST00000167288.82074520aaENSMUSP00000125777.2
 
Protein coding
CCDS51306E9Q696 GENCODE basicTSL:5
Lck-206ENSMUST00000134336.336892aaENSMUSP00000119263.2
 
Protein coding
-B2KG65 TSL:2CDS 3' incomplete
Lck-205ENSMUST00000132030.2779No protein-
 
Retained intron
--TSL:2
Lck-204ENSMUST00000127943.2608No protein-
 
Retained intron
--TSL:3
Lck-203ENSMUST00000123640.2568No protein-
 
Retained intron
--TSL:2
Lck-207ENSMUST00000139957.2450No protein-
 
Retained intron
--TSL:1
Description

tight junction protein 2 [Source:HGNC Symbol;Acc:HGNC:11828]

Gene Synonyms

DFNA51, X104, ZO-2, ZO2

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TJP2-202ENST00000377245.945031190aaENSP00000366453.4
 
Protein coding
CCDS6627Q9UDY2-1 NM_004817.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
TJP2-201ENST00000348208.940551043aaENSP00000345893.4
 
Protein coding
CCDS6628Q9UDY2-2 -GENCODE basicAPPRIS ALT2TSL:1
TJP2-207ENST00000535702.639841157aaENSP00000442090.1
 
Protein coding
CCDS55315Q9UDY2-6 -GENCODE basicAPPRIS ALT2TSL:2
TJP2-208ENST00000539225.238381221aaENSP00000438262.1
 
Protein coding
CCDS55316Q9UDY2-7 -GENCODE basicAPPRIS ALT2TSL:2
TJP2-225ENST00000649943.156721099aaENSP00000497539.1
 
Protein coding
-A0A3B3ISZ5 -GENCODE basicAPPRIS ALT2
TJP2-220ENST00000649114.15344989aaENSP00000497328.1
 
Protein coding
-A0A3B3ISF1 -GENCODE basicAPPRIS ALT2
TJP2-211ENST00000636438.146891249aaENSP00000489860.1
 
Protein coding
-A0A1B0GTW1 -GENCODE basicAPPRIS ALT2TSL:5
TJP2-226ENST00000650084.143891191aaENSP00000497861.1
 
Protein coding
-A0A3B3ITE1 -CDS 5' incomplete
TJP2-221ENST00000649134.139641047aaENSP00000498068.1
 
Protein coding
-A0A3B3IU51 -GENCODE basicAPPRIS ALT2
TJP2-227ENST00000650333.136121128aaENSP00000496791.1
 
Protein coding
-A0A3B3IRI3 -GENCODE basicAPPRIS ALT2
TJP2-213ENST00000647986.12868851aaENSP00000496877.1
 
Protein coding
-A0A3B3IRV6 -CDS 3' incomplete
TJP2-214ENST00000648042.12771652aaENSP00000497059.1
 
Protein coding
-A0A3B3IS03 -CDS 5' incomplete
TJP2-217ENST00000648402.11483134aaENSP00000497596.1
 
Protein coding
-U3KQJ2 -CDS 3' incomplete
TJP2-205ENST00000423935.6869161aaENSP00000402941.1
 
Protein coding
-B1AN86 -TSL:2CDS 3' incomplete
TJP2-224ENST00000649939.1597156aaENSP00000498043.1
 
Protein coding
-A0A3B3IU26 -CDS 3' incomplete
TJP2-209ENST00000606364.5591134aaENSP00000475926.1
 
Protein coding
-U3KQJ2 -TSL:4CDS 3' incomplete
TJP2-212ENST00000643713.14905aaENSP00000494704.1
 
Protein coding
---CDS 3' incomplete
TJP2-230ENST00000650460.12851621aaENSP00000497787.1
 
Nonsense mediated decay
-A0A3B3IT83 -CDS 5' incomplete
TJP2-222ENST00000649783.14264No protein-
 
Processed transcript
----
TJP2-231ENST00000650522.13774No protein-
 
Processed transcript
----
TJP2-229ENST00000650378.1629No protein-
 
Processed transcript
----
TJP2-216ENST00000648153.1573No protein-
 
Processed transcript
----
TJP2-215ENST00000648087.15085No protein-
 
Retained intron
----
TJP2-206ENST00000498204.24685No protein-
 
Retained intron
---TSL:2
TJP2-210ENST00000636247.13725No protein-
 
Retained intron
---TSL:1
TJP2-223ENST00000649927.13374No protein-
 
Retained intron
----
TJP2-228ENST00000650353.13282No protein-
 
Retained intron
----
TJP2-204ENST00000413932.1822No protein-
 
Retained intron
---TSL:3
TJP2-218ENST00000648460.1611No protein-
 
Retained intron
----
TJP2-203ENST00000377259.5588No protein-
 
Retained intron
---TSL:3
TJP2-219ENST00000648862.1464No protein-
 
Retained intron
----
Description

plexin A4 [Source:VGNC Symbol;Acc:VGNC:44721]

Location
NameTranscript IDbpProteinTranslation IDBiotypeUniProt MatchFlags
PLXNA4-202ENSCAFT00000089067.164721939aaENSCAFP00000064463.1
 
Protein coding
A0A5F4DHZ1 -
PLXNA4-203ENSCAFT00000002128.463891893aaENSCAFP00000001969.3
 
Protein coding
E2RL41 -
PLXNA4-201ENSCAFT00000069385.12116487aaENSCAFP00000048646.1
 
Protein coding
A0A5F4C383 -
PLXNA4-205ENSCAFT00000065612.11602533aaENSCAFP00000062040.1
 
Protein coding
A0A5F4DB36 -
PLXNA4-206ENSCAFT00000091482.11593530aaENSCAFP00000055763.1
 
Protein coding
A0A5F4CN57 -
PLXNA4-204ENSCAFT00000071505.11587528aaENSCAFP00000048315.1
 
Protein coding
A0A5F4C272 -
Description

adhesion G protein-coupled receptor V1 [Source:HGNC Symbol;Acc:HGNC:17416]

Gene Synonyms

DKFZp761P0710, FEB4, GPR98, KIAA0686, MASS1, USH2C, VLGR1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ADGRV1-201ENST00000405460.9195576306aaENSP00000384582.2
 
Protein coding
CCDS47246Q8WXG9-1 NM_032119.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ADGRV1-202ENST00000425867.381412624aaENSP00000392618.3
 
Protein coding
-A0A1X7SBU6 -TSL:5CDS 5' incomplete
ADGRV1-232ENST00000640403.167232038aaENSP00000492531.1
 
Protein coding
-A0A1W2PRC7 -TSL:5CDS 3' incomplete
ADGRV1-214ENST00000638975.12467390aaENSP00000492630.1
 
Protein coding
-A0A1W2PRR5 -TSL:5CDS 5' incomplete
ADGRV1-237ENST00000640815.11522334aaENSP00000491767.1
 
Protein coding
-A0A1W2PQK7 -GENCODE basicTSL:2
ADGRV1-222ENST00000639821.1893192aaENSP00000492216.1
 
Protein coding
-A0A1W2PQP9 -GENCODE basicTSL:3
ADGRV1-206ENST00000507314.269873aaENSP00000491299.1
 
Protein coding
-A0A1W2PP32 -TSL:3CDS 5' incomplete
ADGRV1-207ENST00000508842.5582148aaENSP00000425936.1
 
Protein coding
-D6RIF0 -TSL:3CDS 3' incomplete
ADGRV1-221ENST00000639707.1564123aaENSP00000492328.1
 
Protein coding
-A0A1W2PQU5 -TSL:3CDS 3' incomplete
ADGRV1-230ENST00000640369.1500123aaENSP00000491401.1
 
Protein coding
-A0A1W2PQU5 -TSL:5CDS 3' incomplete
ADGRV1-233ENST00000640407.15673938aaENSP00000491425.1
 
Nonsense mediated decay
-A0A1W2PPA4 -TSL:5CDS 5' incomplete
ADGRV1-236ENST00000640779.14680567aaENSP00000492527.1
 
Nonsense mediated decay
-A0A1W2PR84 -TSL:5CDS 5' incomplete
ADGRV1-224ENST00000640012.1324165aaENSP00000492538.1
 
Nonsense mediated decay
-A0A1W2PS08 -TSL:5CDS 5' incomplete
ADGRV1-215ENST00000638990.1243380aaENSP00000492781.1
 
Nonsense mediated decay
-A0A1W2PS99 -TSL:5CDS 5' incomplete
ADGRV1-203ENST00000450321.287972aaENSP00000492054.1
 
Nonsense mediated decay
-A0A1W2PR51 -TSL:1CDS 5' incomplete
ADGRV1-217ENST00000639431.161199aaENSP00000491057.1
 
Nonsense mediated decay
-A0A1W2PNS5 -TSL:5CDS 5' incomplete
ADGRV1-216ENST00000639212.11167No protein-
 
Processed transcript
---TSL:5
ADGRV1-219ENST00000639530.11101No protein-
 
Processed transcript
---TSL:5
ADGRV1-228ENST00000640256.1904No protein-
 
Processed transcript
---TSL:5
ADGRV1-212ENST00000638585.1631No protein-
 
Processed transcript
---TSL:5
ADGRV1-225ENST00000640061.1584No protein-
 
Processed transcript
---TSL:4
ADGRV1-205ENST00000505845.2559No protein-
 
Processed transcript
---TSL:5
ADGRV1-218ENST00000639473.16608No protein-
 
Retained intron
---TSL:5
ADGRV1-211ENST00000638510.16503No protein-
 
Retained intron
---TSL:1
ADGRV1-231ENST00000640374.15401No protein-
 
Retained intron
---TSL:5
ADGRV1-208ENST00000509621.15211No protein-
 
Retained intron
---TSL:1
ADGRV1-204ENST00000504142.25047No protein-
 
Retained intron
---TSL:5
ADGRV1-234ENST00000640464.14505No protein-
 
Retained intron
---TSL:5
ADGRV1-220ENST00000639676.13116No protein-
 
Retained intron
---TSL:5
ADGRV1-227ENST00000640109.12906No protein-
 
Retained intron
---TSL:5
ADGRV1-210ENST00000638316.12221No protein-
 
Retained intron
---TSL:5
ADGRV1-229ENST00000640281.11466No protein-
 
Retained intron
---TSL:1
ADGRV1-226ENST00000640083.11454No protein-
 
Retained intron
---TSL:5
ADGRV1-235ENST00000640729.11360No protein-
 
Retained intron
---TSL:5
ADGRV1-213ENST00000638638.11309No protein-
 
Retained intron
---TSL:5
ADGRV1-223ENST00000639884.11177No protein-
 
Retained intron
---TSL:5
ADGRV1-209ENST00000513828.1596No protein-
 
Retained intron
---TSL:4
Description

flightless I actin binding protein [Source:MGI Symbol;Acc:MGI:1342286]

Gene Synonyms

3632430F08Rik, Fliih

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Flii-201ENSMUST00000002889.540601271aaENSMUSP00000002889.5
 
Protein coding
CCDS24795Q9JJ28 GENCODE basicAPPRIS P1TSL:1
Flii-204ENSMUST00000154465.2782No protein-
 
Retained intron
--TSL:3
Flii-202ENSMUST00000137226.2706No protein-
 
Retained intron
--TSL:2
Flii-203ENSMUST00000154141.2458No protein-
 
Retained intron
--TSL:2
Description

proline rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:30500]

Gene Synonyms

DKFZp547J199, DSPB3, DYT10, EKD1, FICCA, FLJ25513, ICCA, IFITMD1, PKC

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
PRRT2-202ENST00000358758.122462340aaENSP00000351608.7
 
Protein coding
CCDS10654Q7Z6L0-1 NM_145239.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
PRRT2-201ENST00000300797.73002299aaENSP00000300797.6
 
Protein coding
CCDS58446Q7Z6L0-3 -GENCODE basicTSL:2
PRRT2-221ENST00000647876.12867299aaENSP00000498021.1
 
Protein coding
CCDS58446Q7Z6L0-3 -GENCODE basic
PRRT2-207ENST00000572820.22403340aaENSP00000458291.2
 
Protein coding
CCDS10654Q7Z6L0-1 -GENCODE basicAPPRIS ALT2TSL:5
PRRT2-214ENST00000637064.12153340aaENSP00000490826.1
 
Protein coding
CCDS10654Q7Z6L0-1 -GENCODE basicAPPRIS ALT2TSL:5
PRRT2-205ENST00000567659.31470394aaENSP00000456226.1
 
Protein coding
CCDS58445Q7Z6L0-2 -GENCODE basicAPPRIS P4TSL:2
PRRT2-212ENST00000636619.12065287aaENSP00000489669.1
 
Protein coding
-A0A1B0GTE9 -GENCODE basicTSL:5
PRRT2-216ENST00000637403.12033286aaENSP00000489782.1
 
Protein coding
-A0A1B0GTP1 -GENCODE basicTSL:5
PRRT2-219ENST00000637565.11733155aaENSP00000490207.1
 
Protein coding
-A0A1B0GUR0 -GENCODE basicTSL:5
PRRT2-204ENST00000567551.2644145aaENSP00000489813.1
 
Protein coding
-A0A1B0GTS0 -TSL:5CDS 3' incomplete
PRRT2-203ENST00000562148.2564106aaENSP00000454634.2
 
Protein coding
-H3BN10 -TSL:3CDS 3' incomplete
PRRT2-220ENST00000637596.1520128aaENSP00000489805.1
 
Protein coding
-A0A1B0GTR2 -TSL:5CDS 3' incomplete
PRRT2-211ENST00000636246.1517118aaENSP00000489948.1
 
Protein coding
-A0A1B0GU37 -TSL:5CDS 3' incomplete
PRRT2-213ENST00000636902.110033aaENSP00000489935.1
 
Protein coding
-A0A1B0GU25 -TSL:5CDS 5' and 3' incomplete
PRRT2-210ENST00000636131.12365299aaENSP00000490390.1
 
Nonsense mediated decay
CCDS58446Q7Z6L0-3 -TSL:5
PRRT2-215ENST00000637290.12009130aaENSP00000490278.1
 
Nonsense mediated decay
-A0A1B0GUW9 -TSL:5
PRRT2-206ENST00000568516.1534No protein-
 
Processed transcript
---TSL:4
PRRT2-209ENST00000636019.1131No protein-
 
Processed transcript
---TSL:5
PRRT2-218ENST00000637542.1100No protein-
 
Processed transcript
---TSL:5
PRRT2-208ENST00000636001.1100No protein-
 
Processed transcript
---TSL:5
PRRT2-217ENST00000637425.1100No protein-
 
Processed transcript
---TSL:5
Description

ceramide synthase 4 [Source:MGI Symbol;Acc:MGI:1914510]

Gene Synonyms

2900019C14Rik, CerS4, Lass4, Trh1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Cers4-201ENSMUST00000008350.169475393aaENSMUSP00000008350.9
 
Protein coding
CCDS22086Q9D6J1 GENCODE basicAPPRIS P1TSL:1
Cers4-203ENSMUST00000176042.238756aaENSMUSP00000135594.2
 
Protein coding
-H3BKZ9 TSL:3CDS 3' incomplete
Cers4-204ENSMUST00000176130.10874211aaENSMUSP00000135652.2
 
Nonsense mediated decay
-H3BL50 TSL:5
Cers4-209ENSMUST00000177010.10561No protein-
 
Processed transcript
--TSL:5
Cers4-208ENSMUST00000176932.83674No protein-
 
Retained intron
--TSL:2
Cers4-205ENSMUST00000176267.93369No protein-
 
Retained intron
--TSL:2
Cers4-207ENSMUST00000176837.83116No protein-
 
Retained intron
--TSL:1
Cers4-202ENSMUST00000175781.52539No protein-
 
Retained intron
--TSL:1
Cers4-206ENSMUST00000176705.2908No protein-
 
Retained intron
--TSL:2
Description

PCBP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42948]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PCBP1-AS1-221ENST00000424748.1793No protein-
 
Retained intron
--TSL:5
PCBP1-AS1-331ENST00000628659.2922No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
PCBP1-AS1-440ENST00000682294.14755No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-441ENST00000684630.14136No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-367ENST00000630975.34088No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-214ENST00000419542.43975No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-423ENST00000666075.13908No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-383ENST00000655086.13899No protein-
 
lncRNA
---
PCBP1-AS1-375ENST00000653606.13740No protein-
 
lncRNA
---
PCBP1-AS1-374ENST00000653596.13314No protein-
 
lncRNA
---
PCBP1-AS1-398ENST00000659941.13305No protein-
 
lncRNA
---
PCBP1-AS1-355ENST00000629943.33287No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-400ENST00000660903.13285No protein-
 
lncRNA
---
PCBP1-AS1-431ENST00000669583.13254No protein-
 
lncRNA
---
PCBP1-AS1-429ENST00000668711.13235No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-424ENST00000666167.13185No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-377ENST00000654336.13154No protein-
 
lncRNA
---
PCBP1-AS1-209ENST00000416068.63118No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-386ENST00000655420.12985No protein-
 
lncRNA
---
PCBP1-AS1-436ENST00000670785.12825No protein-
 
lncRNA
---
PCBP1-AS1-415ENST00000664754.12817No protein-
 
lncRNA
---
PCBP1-AS1-422ENST00000666074.12769No protein-
 
lncRNA
---
PCBP1-AS1-401ENST00000661703.12760No protein-
 
lncRNA
---
PCBP1-AS1-287ENST00000625955.32733No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-382ENST00000655058.12690No protein-
 
lncRNA
---
PCBP1-AS1-403ENST00000661989.12688No protein-
 
lncRNA
---
PCBP1-AS1-421ENST00000665838.12679No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-378ENST00000654601.12673No protein-
 
lncRNA
---
PCBP1-AS1-380ENST00000654878.12658No protein-
 
lncRNA
---
PCBP1-AS1-418ENST00000665172.12646No protein-
 
lncRNA
---
PCBP1-AS1-408ENST00000663209.12625No protein-
 
lncRNA
---
PCBP1-AS1-371ENST00000653064.12612No protein-
 
lncRNA
---
PCBP1-AS1-381ENST00000654958.12605No protein-
 
lncRNA
---
PCBP1-AS1-388ENST00000656308.12596No protein-
 
lncRNA
---
PCBP1-AS1-435ENST00000670313.12575No protein-
 
lncRNA
---
PCBP1-AS1-362ENST00000630520.32556No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-379ENST00000654716.12527No protein-
 
lncRNA
---
PCBP1-AS1-385ENST00000655140.12521No protein-
 
lncRNA
---
PCBP1-AS1-219ENST00000422515.62513No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-409ENST00000663375.12500No protein-
 
lncRNA
---
PCBP1-AS1-433ENST00000669896.12499No protein-
 
lncRNA
---
PCBP1-AS1-412ENST00000664419.12497No protein-
 
lncRNA
---
PCBP1-AS1-390ENST00000656852.12492No protein-
 
lncRNA
---
PCBP1-AS1-293ENST00000626509.32481No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-416ENST00000664773.12475No protein-
 
lncRNA
---
PCBP1-AS1-210ENST00000416395.62457No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-404ENST00000662103.12451No protein-
 
lncRNA
---
PCBP1-AS1-236ENST00000449178.62409No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-223ENST00000425601.62393No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-227ENST00000435880.62386No protein-
 
lncRNA
--GENCODE basicTSL:1
PCBP1-AS1-430ENST00000669570.12356No protein-
 
lncRNA
---
PCBP1-AS1-437ENST00000670786.12353No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-396ENST00000659531.12331No protein-
 
lncRNA
---
PCBP1-AS1-411ENST00000664049.12330No protein-
 
lncRNA
---
PCBP1-AS1-395ENST00000659305.12315No protein-
 
lncRNA
---
PCBP1-AS1-389ENST00000656326.12300No protein-
 
lncRNA
---
PCBP1-AS1-439ENST00000670974.12274No protein-
 
lncRNA
---
PCBP1-AS1-373ENST00000653289.12259No protein-
 
lncRNA
---
PCBP1-AS1-393ENST00000657575.12257No protein-
 
lncRNA
---
PCBP1-AS1-394ENST00000658454.12242No protein-
 
lncRNA
---
PCBP1-AS1-376ENST00000653811.12232No protein-
 
lncRNA
---
PCBP1-AS1-402ENST00000661863.12216No protein-
 
lncRNA
---
PCBP1-AS1-295ENST00000626558.32205No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-230ENST00000439670.62180No protein-
 
lncRNA
--GENCODE basicTSL:2
PCBP1-AS1-427ENST00000667952.12170No protein-
 
lncRNA
---
PCBP1-AS1-434ENST00000670036.12156No protein-
 
lncRNA
---
PCBP1-AS1-428ENST00000668191.12149No protein-
 
lncRNA
---
PCBP1-AS1-266ENST00000612202.52131No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-417ENST00000664958.12112No protein-
 
lncRNA
---
PCBP1-AS1-387ENST00000655481.12105No protein-
 
lncRNA
---
PCBP1-AS1-410ENST00000664014.12091No protein-
 
lncRNA
---
PCBP1-AS1-384ENST00000655096.12077No protein-
 
lncRNA
---
PCBP1-AS1-391ENST00000657164.11985No protein-
 
lncRNA
---
PCBP1-AS1-425ENST00000667307.11958No protein-
 
lncRNA
---
PCBP1-AS1-392ENST00000657291.11931No protein-
 
lncRNA
---
PCBP1-AS1-243ENST00000458698.61893No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-228ENST00000437019.21852No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-438ENST00000670845.11847No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-426ENST00000667874.11835No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-405ENST00000662224.11646No protein-
 
lncRNA
---
PCBP1-AS1-264ENST00000609543.61639No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-216ENST00000420309.61611No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-432ENST00000669812.11527No protein-
 
lncRNA
---
PCBP1-AS1-414ENST00000664533.11498No protein-
 
lncRNA
---
PCBP1-AS1-372ENST00000653114.11482No protein-
 
lncRNA
---
PCBP1-AS1-399ENST00000660404.11388No protein-
 
lncRNA
---
PCBP1-AS1-420ENST00000665708.11385No protein-
 
lncRNA
---
PCBP1-AS1-240ENST00000457770.61340No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-357ENST00000630214.21333No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-397ENST00000659586.11329No protein-
 
lncRNA
---
PCBP1-AS1-419ENST00000665264.11286No protein-
 
lncRNA
---
PCBP1-AS1-283ENST00000625788.31268No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-313ENST00000627327.21257No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-349ENST00000629533.21227No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-244ENST00000594376.61197No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-237ENST00000452431.51194No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-413ENST00000664483.11189No protein-
 
lncRNA
---
PCBP1-AS1-320ENST00000627918.21146No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-407ENST00000663033.11136No protein-
 
lncRNA
---
PCBP1-AS1-232ENST00000442040.51111No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-310ENST00000627181.21099No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-325ENST00000628305.21063No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-359ENST00000630283.21063No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-224ENST00000429599.61045No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-294ENST00000626515.21041No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-279ENST00000625625.21025No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-242ENST00000458686.51020No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-326ENST00000628308.2996No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-304ENST00000626898.2961No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-260ENST00000602091.1959No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-351ENST00000629605.2954No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-365ENST00000630746.2932No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-363ENST00000630522.2927No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-276ENST00000625447.2923No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-314ENST00000627398.2922No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-307ENST00000627050.2912No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-289ENST00000626343.2910No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-231ENST00000439892.6907No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-336ENST00000628920.2895No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-335ENST00000628883.2891No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-366ENST00000630759.2891No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-296ENST00000626574.2887No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-201ENST00000366234.7884No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-238ENST00000456161.5880No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-350ENST00000629603.2874No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-308ENST00000627074.2871No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-343ENST00000629339.2870No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-334ENST00000628837.2866No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-278ENST00000625518.2864No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-212ENST00000418308.5863No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-255ENST00000600002.5861No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-269ENST00000613944.3851No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-370ENST00000631110.2851No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-247ENST00000596028.5847No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-272ENST00000625215.2844No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-369ENST00000631107.2840No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-259ENST00000601494.1834No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-341ENST00000629212.2827No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-282ENST00000625783.2826No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-315ENST00000627487.3815No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-330ENST00000628551.2813No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-297ENST00000626609.2809No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-234ENST00000444320.5809No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-354ENST00000629909.2807No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-250ENST00000596665.5800No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-248ENST00000596259.3791No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-290ENST00000626370.2784No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-347ENST00000629485.2784No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-352ENST00000629825.2778No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-249ENST00000596573.5774No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-345ENST00000629407.2767No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-328ENST00000628374.2766No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-292ENST00000626495.2765No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-286ENST00000625888.2765No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-337ENST00000629084.2761No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-324ENST00000628263.2755No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-332ENST00000628667.2745No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-285ENST00000625864.2744No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-273ENST00000625227.2743No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-205ENST00000413791.5743No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-303ENST00000626842.2741No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-311ENST00000627189.2740No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-262ENST00000604346.5736No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-339ENST00000629184.2731No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-353ENST00000629836.2723No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-346ENST00000629415.2723No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-300ENST00000626735.2717No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-406ENST00000662425.1709No protein-
 
lncRNA
---
PCBP1-AS1-298ENST00000626632.2708No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-340ENST00000629188.2705No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-318ENST00000627542.2702No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-306ENST00000627037.2700No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-288ENST00000626162.2696No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-327ENST00000628322.2694No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-217ENST00000421255.5694No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-252ENST00000598586.1693No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-245ENST00000594548.5692No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-316ENST00000627528.2682No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-257ENST00000601396.5679No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-344ENST00000629374.2676No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-312ENST00000627325.2673No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-233ENST00000442326.1668No protein-
 
lncRNA
--GENCODE basicTSL:3
PCBP1-AS1-348ENST00000629506.2667No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-319ENST00000627630.2666No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-277ENST00000625490.2666No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-254ENST00000599673.5665No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-218ENST00000421843.5664No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-317ENST00000627540.2662No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-253ENST00000599427.5662No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-271ENST00000617142.3658No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-275ENST00000625439.2651No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-261ENST00000603347.5651No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-274ENST00000625257.2648No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-321ENST00000628102.2644No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-356ENST00000630206.2637No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-361ENST00000630457.2635No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-364ENST00000630685.2633No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-323ENST00000628201.2624No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-246ENST00000595459.5624No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-333ENST00000628757.2623No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-256ENST00000601395.1614No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-309ENST00000627155.2610No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-284ENST00000625838.2609No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-270ENST00000614826.4609No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-204ENST00000413436.5602No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-301ENST00000626769.2602No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-251ENST00000597318.5599No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-360ENST00000630377.2598No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-368ENST00000630985.2594No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-229ENST00000437456.5583No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-225ENST00000432604.5569No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-358ENST00000630280.2566No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-299ENST00000626683.2565No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-226ENST00000434781.5565No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-215ENST00000419963.5564No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-208ENST00000415742.5564No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-203ENST00000413069.5563No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-280ENST00000625691.2561No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-322ENST00000628147.2553No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-220ENST00000423402.5553No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-213ENST00000418564.5547No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-202ENST00000411429.5547No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-222ENST00000425333.5546No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-239ENST00000457076.5542No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-211ENST00000416506.5542No protein-
 
lncRNA
--TSL:1
PCBP1-AS1-263ENST00000609075.5520No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-338ENST00000629178.2517No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-206ENST00000415060.6507No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-207ENST00000415222.5502No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-241ENST00000457870.5501No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-235ENST00000444410.5478No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-291ENST00000626440.2461No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-302ENST00000626834.2453No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-268ENST00000612876.4417No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-342ENST00000629304.1397No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-267ENST00000612430.3374No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-265ENST00000610168.1365No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-329ENST00000628455.2361No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-258ENST00000601431.5360No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-281ENST00000625724.1218No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-305ENST00000627019.1208No protein-
 
lncRNA
--TSL:5
Description

breast cancer 2, early onset [Source:MGI Symbol;Acc:MGI:109337]

Gene Synonyms

Fancd1, RAB163

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Brca2-201ENSMUST00000044620.11107243329aaENSMUSP00000038576.8
 
Protein coding
CCDS39411P97929 GENCODE basicAPPRIS P1TSL:5
Brca2-210ENSMUST00000202313.2105173329aaENSMUSP00000144150.2
 
Protein coding
CCDS39411P97929 GENCODE basicAPPRIS P1TSL:1
Brca2-208ENSMUST00000202003.43473992aaENSMUSP00000144676.2
 
Protein coding
-A0A0J9YVI7 TSL:1CDS 3' incomplete
Brca2-206ENSMUST00000201309.41340No protein-
 
Processed transcript
--TSL:1
Brca2-203ENSMUST00000201149.2634No protein-
 
Processed transcript
--TSL:5
Brca2-209ENSMUST00000202192.2588No protein-
 
Processed transcript
--TSL:2
Brca2-214ENSMUST00000202975.42534No protein-
 
Retained intron
--TSL:2
Brca2-204ENSMUST00000201165.21742No protein-
 
Retained intron
--TSL:NA
Brca2-202ENSMUST00000200686.4937No protein-
 
Retained intron
--TSL:2
Brca2-205ENSMUST00000201226.2864No protein-
 
Retained intron
--TSL:2
Brca2-211ENSMUST00000202693.2688No protein-
 
Retained intron
--TSL:3
Brca2-213ENSMUST00000202837.2669No protein-
 
Retained intron
--TSL:3
Brca2-207ENSMUST00000201678.2646No protein-
 
Retained intron
--TSL:3
Brca2-212ENSMUST00000202727.2479No protein-
 
Retained intron
--TSL:2
Description

VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VRK1-201ENST00000216639.81663396aaENSP00000216639.3
 
Protein coding
CCDS9947Q99986 NM_003384.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VRK1-240ENST00000680756.12783396aaENSP00000506648.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-251ENST00000681344.11960396aaENSP00000506151.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-220ENST00000679816.11765396aaENSP00000506525.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-252ENST00000681355.11719396aaENSP00000506214.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-230ENST00000680335.15188375aaENSP00000505806.1
 
Protein coding
---GENCODE basic
VRK1-250ENST00000681249.12411395aaENSP00000506013.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-254ENST00000681419.11823393aaENSP00000505512.1
 
Protein coding
---GENCODE basic
VRK1-204ENST00000553683.21816420aaENSP00000451412.2
 
Protein coding
-H0YJF7 -GENCODE basicTSL:3
VRK1-239ENST00000680724.11813395aaENSP00000504891.1
 
Protein coding
---GENCODE basic
VRK1-219ENST00000679770.11704448aaENSP00000505214.1
 
Protein coding
---GENCODE basic
VRK1-249ENST00000681195.11697395aaENSP00000504933.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-238ENST00000680683.11682403aaENSP00000506334.1
 
Protein coding
---GENCODE basic
VRK1-216ENST00000679727.11673394aaENSP00000505844.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-223ENST00000679918.11638420aaENSP00000505439.1
 
Protein coding
---GENCODE basic
VRK1-241ENST00000680849.11634395aaENSP00000505602.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-256ENST00000681493.11625394aaENSP00000506429.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-212ENST00000679462.11527437aaENSP00000506011.1
 
Protein coding
---GENCODE basic
VRK1-226ENST00000680007.11525420aaENSP00000505683.1
 
Protein coding
---GENCODE basic
VRK1-242ENST00000680851.11511395aaENSP00000505159.1
 
Protein coding
---GENCODE basic
VRK1-222ENST00000679903.11444393aaENSP00000506022.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-237ENST00000680538.11435366aaENSP00000505611.1
 
Protein coding
---GENCODE basic
VRK1-263ENST00000681785.11375356aaENSP00000505166.1
 
Protein coding
---CDS 3' incomplete
VRK1-209ENST00000557352.21320394aaENSP00000451682.2
 
Protein coding
-H0YJJ9 -GENCODE basicTSL:5
VRK1-217ENST00000679736.11202244aaENSP00000506517.1
 
Protein coding
---GENCODE basic
VRK1-235ENST00000680509.11130356aaENSP00000505209.1
 
Protein coding
---CDS 3' incomplete
VRK1-248ENST00000681176.11009314aaENSP00000505454.1
 
Protein coding
---GENCODE basic
VRK1-208ENST00000557222.6922228aaENSP00000450820.2
 
Protein coding
-H0YJ50 -TSL:5CDS 3' incomplete
VRK1-257ENST00000681524.16456244aaENSP00000505783.1
 
Nonsense mediated decay
----
VRK1-234ENST00000680387.12689444aaENSP00000504908.1
 
Nonsense mediated decay
----
VRK1-247ENST00000681101.12040413aaENSP00000506564.1
 
Nonsense mediated decay
----
VRK1-224ENST00000679941.12036375aaENSP00000506520.1
 
Nonsense mediated decay
----
VRK1-244ENST00000680993.11932172aaENSP00000505511.1
 
Nonsense mediated decay
----
VRK1-253ENST00000681363.11882372aaENSP00000505564.1
 
Nonsense mediated decay
----
VRK1-262ENST00000681778.11869375aaENSP00000506049.1
 
Nonsense mediated decay
----
VRK1-218ENST00000679758.11681362aaENSP00000505539.1
 
Nonsense mediated decay
----
VRK1-225ENST00000679977.11657249aaENSP00000504897.1
 
Nonsense mediated decay
----
VRK1-210ENST00000679365.11635442aaENSP00000505882.1
 
Nonsense mediated decay
----
VRK1-258ENST00000681538.11580321aaENSP00000506662.1
 
Nonsense mediated decay
----
VRK1-215ENST00000679650.11528101aaENSP00000505156.1
 
Nonsense mediated decay
----
VRK1-243ENST00000680922.11520244aaENSP00000506480.1
 
Nonsense mediated decay
----
VRK1-261ENST00000681695.1140283aaENSP00000506225.1
 
Nonsense mediated decay
----
VRK1-259ENST00000681598.1139683aaENSP00000506128.1
 
Nonsense mediated decay
----
VRK1-236ENST00000680526.1134783aaENSP00000505595.1
 
Nonsense mediated decay
----
VRK1-260ENST00000681677.1129746aaENSP00000505010.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-214ENST00000679533.1128772aaENSP00000505873.1
 
Nonsense mediated decay
----
VRK1-255ENST00000681474.11280302aaENSP00000505569.1
 
Nonsense mediated decay
----
VRK1-245ENST00000681061.1121146aaENSP00000506083.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-246ENST00000681077.11193161aaENSP00000505642.1
 
Nonsense mediated decay
----
VRK1-233ENST00000680384.1118272aaENSP00000506237.1
 
Nonsense mediated decay
----
VRK1-232ENST00000680348.11070170aaENSP00000504922.1
 
Nonsense mediated decay
----
VRK1-228ENST00000680222.1100381aaENSP00000506647.1
 
Nonsense mediated decay
----
VRK1-231ENST00000680339.1947101aaENSP00000506470.1
 
Nonsense mediated decay
----
VRK1-221ENST00000679843.187352aaENSP00000506467.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-211ENST00000679452.178599aaENSP00000505395.1
 
Nonsense mediated decay
----
VRK1-229ENST00000680319.1750No protein-
 
Processed transcript
----
VRK1-205ENST00000555067.211646No protein-
 
Retained intron
---TSL:3
VRK1-213ENST00000679506.13648No protein-
 
Retained intron
----
VRK1-202ENST00000435624.32131No protein-
 
Retained intron
---TSL:5
VRK1-227ENST00000680084.12013No protein-
 
Retained intron
----
VRK1-203ENST00000495064.21829No protein-
 
Retained intron
---TSL:5
VRK1-206ENST00000555351.2968No protein-
 
Retained intron
---TSL:2
VRK1-207ENST00000555402.1415No protein-
 
Retained intron
---TSL:3
Description

PCBP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42948]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PCBP1-AS1-221ENST00000424748.1793No protein-
 
Retained intron
--TSL:5
PCBP1-AS1-331ENST00000628659.2922No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
PCBP1-AS1-440ENST00000682294.14755No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-441ENST00000684630.14136No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-367ENST00000630975.34088No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-214ENST00000419542.43975No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-423ENST00000666075.13908No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-383ENST00000655086.13899No protein-
 
lncRNA
---
PCBP1-AS1-375ENST00000653606.13740No protein-
 
lncRNA
---
PCBP1-AS1-374ENST00000653596.13314No protein-
 
lncRNA
---
PCBP1-AS1-398ENST00000659941.13305No protein-
 
lncRNA
---
PCBP1-AS1-355ENST00000629943.33287No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-400ENST00000660903.13285No protein-
 
lncRNA
---
PCBP1-AS1-431ENST00000669583.13254No protein-
 
lncRNA
---
PCBP1-AS1-429ENST00000668711.13235No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-424ENST00000666167.13185No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-377ENST00000654336.13154No protein-
 
lncRNA
---
PCBP1-AS1-209ENST00000416068.63118No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-386ENST00000655420.12985No protein-
 
lncRNA
---
PCBP1-AS1-436ENST00000670785.12825No protein-
 
lncRNA
---
PCBP1-AS1-415ENST00000664754.12817No protein-
 
lncRNA
---
PCBP1-AS1-422ENST00000666074.12769No protein-
 
lncRNA
---
PCBP1-AS1-401ENST00000661703.12760No protein-
 
lncRNA
---
PCBP1-AS1-287ENST00000625955.32733No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-382ENST00000655058.12690No protein-
 
lncRNA
---
PCBP1-AS1-403ENST00000661989.12688No protein-
 
lncRNA
---
PCBP1-AS1-421ENST00000665838.12679No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-378ENST00000654601.12673No protein-
 
lncRNA
---
PCBP1-AS1-380ENST00000654878.12658No protein-
 
lncRNA
---
PCBP1-AS1-418ENST00000665172.12646No protein-
 
lncRNA
---
PCBP1-AS1-408ENST00000663209.12625No protein-
 
lncRNA
---
PCBP1-AS1-371ENST00000653064.12612No protein-
 
lncRNA
---
PCBP1-AS1-381ENST00000654958.12605No protein-
 
lncRNA
---
PCBP1-AS1-388ENST00000656308.12596No protein-
 
lncRNA
---
PCBP1-AS1-435ENST00000670313.12575No protein-
 
lncRNA
---
PCBP1-AS1-362ENST00000630520.32556No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-379ENST00000654716.12527No protein-
 
lncRNA
---
PCBP1-AS1-385ENST00000655140.12521No protein-
 
lncRNA
---
PCBP1-AS1-219ENST00000422515.62513No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-409ENST00000663375.12500No protein-
 
lncRNA
---
PCBP1-AS1-433ENST00000669896.12499No protein-
 
lncRNA
---
PCBP1-AS1-412ENST00000664419.12497No protein-
 
lncRNA
---
PCBP1-AS1-390ENST00000656852.12492No protein-
 
lncRNA
---
PCBP1-AS1-293ENST00000626509.32481No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-416ENST00000664773.12475No protein-
 
lncRNA
---
PCBP1-AS1-210ENST00000416395.62457No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-404ENST00000662103.12451No protein-
 
lncRNA
---
PCBP1-AS1-236ENST00000449178.62409No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-223ENST00000425601.62393No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-227ENST00000435880.62386No protein-
 
lncRNA
--GENCODE basicTSL:1
PCBP1-AS1-430ENST00000669570.12356No protein-
 
lncRNA
---
PCBP1-AS1-437ENST00000670786.12353No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-396ENST00000659531.12331No protein-
 
lncRNA
---
PCBP1-AS1-411ENST00000664049.12330No protein-
 
lncRNA
---
PCBP1-AS1-395ENST00000659305.12315No protein-
 
lncRNA
---
PCBP1-AS1-389ENST00000656326.12300No protein-
 
lncRNA
---
PCBP1-AS1-439ENST00000670974.12274No protein-
 
lncRNA
---
PCBP1-AS1-373ENST00000653289.12259No protein-
 
lncRNA
---
PCBP1-AS1-393ENST00000657575.12257No protein-
 
lncRNA
---
PCBP1-AS1-394ENST00000658454.12242No protein-
 
lncRNA
---
PCBP1-AS1-376ENST00000653811.12232No protein-
 
lncRNA
---
PCBP1-AS1-402ENST00000661863.12216No protein-
 
lncRNA
---
PCBP1-AS1-295ENST00000626558.32205No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-230ENST00000439670.62180No protein-
 
lncRNA
--GENCODE basicTSL:2
PCBP1-AS1-427ENST00000667952.12170No protein-
 
lncRNA
---
PCBP1-AS1-434ENST00000670036.12156No protein-
 
lncRNA
---
PCBP1-AS1-428ENST00000668191.12149No protein-
 
lncRNA
---
PCBP1-AS1-266ENST00000612202.52131No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-417ENST00000664958.12112No protein-
 
lncRNA
---
PCBP1-AS1-387ENST00000655481.12105No protein-
 
lncRNA
---
PCBP1-AS1-410ENST00000664014.12091No protein-
 
lncRNA
---
PCBP1-AS1-384ENST00000655096.12077No protein-
 
lncRNA
---
PCBP1-AS1-391ENST00000657164.11985No protein-
 
lncRNA
---
PCBP1-AS1-425ENST00000667307.11958No protein-
 
lncRNA
---
PCBP1-AS1-392ENST00000657291.11931No protein-
 
lncRNA
---
PCBP1-AS1-243ENST00000458698.61893No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-228ENST00000437019.21852No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-438ENST00000670845.11847No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-426ENST00000667874.11835No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-405ENST00000662224.11646No protein-
 
lncRNA
---
PCBP1-AS1-264ENST00000609543.61639No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-216ENST00000420309.61611No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-432ENST00000669812.11527No protein-
 
lncRNA
---
PCBP1-AS1-414ENST00000664533.11498No protein-
 
lncRNA
---
PCBP1-AS1-372ENST00000653114.11482No protein-
 
lncRNA
---
PCBP1-AS1-399ENST00000660404.11388No protein-
 
lncRNA
---
PCBP1-AS1-420ENST00000665708.11385No protein-
 
lncRNA
---
PCBP1-AS1-240ENST00000457770.61340No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-357ENST00000630214.21333No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-397ENST00000659586.11329No protein-
 
lncRNA
---
PCBP1-AS1-419ENST00000665264.11286No protein-
 
lncRNA
---
PCBP1-AS1-283ENST00000625788.31268No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-313ENST00000627327.21257No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-349ENST00000629533.21227No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-244ENST00000594376.61197No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-237ENST00000452431.51194No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-413ENST00000664483.11189No protein-
 
lncRNA
---
PCBP1-AS1-320ENST00000627918.21146No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-407ENST00000663033.11136No protein-
 
lncRNA
---
PCBP1-AS1-232ENST00000442040.51111No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-310ENST00000627181.21099No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-325ENST00000628305.21063No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-359ENST00000630283.21063No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-224ENST00000429599.61045No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-294ENST00000626515.21041No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-279ENST00000625625.21025No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-242ENST00000458686.51020No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-326ENST00000628308.2996No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-304ENST00000626898.2961No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-260ENST00000602091.1959No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-351ENST00000629605.2954No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-365ENST00000630746.2932No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-363ENST00000630522.2927No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-276ENST00000625447.2923No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-314ENST00000627398.2922No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-307ENST00000627050.2912No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-289ENST00000626343.2910No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-231ENST00000439892.6907No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-336ENST00000628920.2895No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-335ENST00000628883.2891No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-366ENST00000630759.2891No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-296ENST00000626574.2887No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-201ENST00000366234.7884No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-238ENST00000456161.5880No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-350ENST00000629603.2874No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-308ENST00000627074.2871No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-343ENST00000629339.2870No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-334ENST00000628837.2866No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-278ENST00000625518.2864No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-212ENST00000418308.5863No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-255ENST00000600002.5861No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-269ENST00000613944.3851No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-370ENST00000631110.2851No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-247ENST00000596028.5847No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-272ENST00000625215.2844No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-369ENST00000631107.2840No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-259ENST00000601494.1834No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-341ENST00000629212.2827No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-282ENST00000625783.2826No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-315ENST00000627487.3815No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-330ENST00000628551.2813No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-297ENST00000626609.2809No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-234ENST00000444320.5809No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-354ENST00000629909.2807No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-250ENST00000596665.5800No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-248ENST00000596259.3791No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-290ENST00000626370.2784No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-347ENST00000629485.2784No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-352ENST00000629825.2778No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-249ENST00000596573.5774No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-345ENST00000629407.2767No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-328ENST00000628374.2766No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-292ENST00000626495.2765No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-286ENST00000625888.2765No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-337ENST00000629084.2761No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-324ENST00000628263.2755No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-332ENST00000628667.2745No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-285ENST00000625864.2744No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-273ENST00000625227.2743No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-205ENST00000413791.5743No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-303ENST00000626842.2741No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-311ENST00000627189.2740No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-262ENST00000604346.5736No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-339ENST00000629184.2731No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-353ENST00000629836.2723No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-346ENST00000629415.2723No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-300ENST00000626735.2717No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-406ENST00000662425.1709No protein-
 
lncRNA
---
PCBP1-AS1-298ENST00000626632.2708No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-340ENST00000629188.2705No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-318ENST00000627542.2702No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-306ENST00000627037.2700No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-288ENST00000626162.2696No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-327ENST00000628322.2694No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-217ENST00000421255.5694No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-252ENST00000598586.1693No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-245ENST00000594548.5692No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-316ENST00000627528.2682No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-257ENST00000601396.5679No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-344ENST00000629374.2676No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-312ENST00000627325.2673No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-233ENST00000442326.1668No protein-
 
lncRNA
--GENCODE basicTSL:3
PCBP1-AS1-348ENST00000629506.2667No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-319ENST00000627630.2666No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-277ENST00000625490.2666No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-254ENST00000599673.5665No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-218ENST00000421843.5664No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-317ENST00000627540.2662No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-253ENST00000599427.5662No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-271ENST00000617142.3658No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-275ENST00000625439.2651No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-261ENST00000603347.5651No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-274ENST00000625257.2648No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-321ENST00000628102.2644No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-356ENST00000630206.2637No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-361ENST00000630457.2635No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-364ENST00000630685.2633No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-323ENST00000628201.2624No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-246ENST00000595459.5624No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-333ENST00000628757.2623No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-256ENST00000601395.1614No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-309ENST00000627155.2610No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-284ENST00000625838.2609No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-270ENST00000614826.4609No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-204ENST00000413436.5602No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-301ENST00000626769.2602No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-251ENST00000597318.5599No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-360ENST00000630377.2598No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-368ENST00000630985.2594No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-229ENST00000437456.5583No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-225ENST00000432604.5569No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-358ENST00000630280.2566No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-299ENST00000626683.2565No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-226ENST00000434781.5565No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-215ENST00000419963.5564No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-208ENST00000415742.5564No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-203ENST00000413069.5563No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-280ENST00000625691.2561No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-322ENST00000628147.2553No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-220ENST00000423402.5553No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-213ENST00000418564.5547No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-202ENST00000411429.5547No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-222ENST00000425333.5546No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-239ENST00000457076.5542No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-211ENST00000416506.5542No protein-
 
lncRNA
--TSL:1
PCBP1-AS1-263ENST00000609075.5520No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-338ENST00000629178.2517No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-206ENST00000415060.6507No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-207ENST00000415222.5502No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-241ENST00000457870.5501No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-235ENST00000444410.5478No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-291ENST00000626440.2461No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-302ENST00000626834.2453No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-268ENST00000612876.4417No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-342ENST00000629304.1397No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-267ENST00000612430.3374No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-265ENST00000610168.1365No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-329ENST00000628455.2361No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-258ENST00000601431.5360No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-281ENST00000625724.1218No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-305ENST00000627019.1208No protein-
 
lncRNA
--TSL:5
Description

long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]

Gene Synonyms

onco-lncRNA-12

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC00511-279ENST00000650033.13766No protein-
 
Retained intron
---
LINC00511-278ENST00000650016.1508No protein-
 
Retained intron
---
LINC00511-244ENST00000648631.12929No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
LINC00511-220ENST00000647652.13700No protein-
 
lncRNA
--GENCODE basic
LINC00511-215ENST00000582712.22586No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-221ENST00000647706.22532No protein-
 
lncRNA
---
LINC00511-261ENST00000649350.12527No protein-
 
lncRNA
---
LINC00511-243ENST00000648623.22522No protein-
 
lncRNA
---
LINC00511-225ENST00000647953.12292No protein-
 
lncRNA
--GENCODE basic
LINC00511-283ENST00000650131.22282No protein-
 
lncRNA
---
LINC00511-213ENST00000581549.22266No protein-
 
lncRNA
--GENCODE basicTSL:2
LINC00511-235ENST00000648401.12214No protein-
 
lncRNA
--GENCODE basic
LINC00511-274ENST00000649793.22208No protein-
 
lncRNA
---
LINC00511-280ENST00000650051.12207No protein-
 
lncRNA
---
LINC00511-289ENST00000650212.12174No protein-
 
lncRNA
--GENCODE basic
LINC00511-276ENST00000649881.12078No protein-
 
lncRNA
---
LINC00511-294ENST00000650371.12061No protein-
 
lncRNA
---
LINC00511-272ENST00000649647.12060No protein-
 
lncRNA
---
LINC00511-302ENST00000650550.22041No protein-
 
lncRNA
--GENCODE basic
LINC00511-262ENST00000649366.12028No protein-
 
lncRNA
---
LINC00511-292ENST00000650313.11995No protein-
 
lncRNA
--GENCODE basic
LINC00511-255ENST00000649250.11978No protein-
 
lncRNA
---
LINC00511-224ENST00000647871.21958No protein-
 
lncRNA
--GENCODE basic
LINC00511-252ENST00000649074.11905No protein-
 
lncRNA
--GENCODE basic
LINC00511-249ENST00000648952.11893No protein-
 
lncRNA
---
LINC00511-299ENST00000650483.11888No protein-
 
lncRNA
---
LINC00511-240ENST00000648520.11888No protein-
 
lncRNA
--GENCODE basic
LINC00511-237ENST00000648411.11843No protein-
 
lncRNA
--GENCODE basic
LINC00511-264ENST00000649433.11836No protein-
 
lncRNA
--GENCODE basic
LINC00511-234ENST00000648297.11823No protein-
 
lncRNA
---
LINC00511-257ENST00000649311.11815No protein-
 
lncRNA
---
LINC00511-253ENST00000649172.11788No protein-
 
lncRNA
---
LINC00511-216ENST00000583460.21778No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00511-275ENST00000649833.11772No protein-
 
lncRNA
---
LINC00511-245ENST00000648667.11751No protein-
 
lncRNA
--GENCODE basic
LINC00511-273ENST00000649733.11742No protein-
 
lncRNA
---
LINC00511-205ENST00000578206.21732No protein-
 
lncRNA
--TSL:3
LINC00511-201ENST00000453722.61716No protein-
 
lncRNA
--TSL:2
LINC00511-227ENST00000648069.11713No protein-
 
lncRNA
--GENCODE basic
LINC00511-218ENST00000647593.11690No protein-
 
lncRNA
---
LINC00511-266ENST00000649489.11682No protein-
 
lncRNA
---
LINC00511-230ENST00000648176.21647No protein-
 
lncRNA
---
LINC00511-202ENST00000457958.71626No protein-
 
lncRNA
--TSL:1
LINC00511-236ENST00000648403.11556No protein-
 
lncRNA
--GENCODE basic
LINC00511-260ENST00000649343.11552No protein-
 
lncRNA
---
LINC00511-306ENST00000650602.21510No protein-
 
lncRNA
--GENCODE basic
LINC00511-233ENST00000648248.11468No protein-
 
lncRNA
---
LINC00511-296ENST00000650423.11455No protein-
 
lncRNA
---
LINC00511-241ENST00000648522.11351No protein-
 
lncRNA
---
LINC00511-281ENST00000650083.11329No protein-
 
lncRNA
---
LINC00511-229ENST00000648104.21264No protein-
 
lncRNA
---
LINC00511-270ENST00000649597.11206No protein-
 
lncRNA
---
LINC00511-298ENST00000650482.11202No protein-
 
lncRNA
---
LINC00511-265ENST00000649440.21159No protein-
 
lncRNA
---
LINC00511-290ENST00000650227.11126No protein-
 
lncRNA
---
LINC00511-271ENST00000649614.11098No protein-
 
lncRNA
---
LINC00511-267ENST00000649532.11045No protein-
 
lncRNA
---
LINC00511-263ENST00000649407.11045No protein-
 
lncRNA
---
LINC00511-226ENST00000648054.11027No protein-
 
lncRNA
---
LINC00511-288ENST00000650211.1977No protein-
 
lncRNA
---
LINC00511-286ENST00000650191.1951No protein-
 
lncRNA
---
LINC00511-254ENST00000649197.1937No protein-
 
lncRNA
--GENCODE basic
LINC00511-291ENST00000650289.2862No protein-
 
lncRNA
---
LINC00511-212ENST00000581183.3860No protein-
 
lncRNA
--TSL:3
LINC00511-295ENST00000650419.1853No protein-
 
lncRNA
---
LINC00511-246ENST00000648672.2841No protein-
 
lncRNA
---
LINC00511-297ENST00000650476.1826No protein-
 
lncRNA
---
LINC00511-268ENST00000649553.1819No protein-
 
lncRNA
---
LINC00511-277ENST00000649936.1796No protein-
 
lncRNA
---
LINC00511-284ENST00000650161.1791No protein-
 
lncRNA
---
LINC00511-256ENST00000649269.1789No protein-
 
lncRNA
---
LINC00511-238ENST00000648428.1780No protein-
 
lncRNA
---
LINC00511-219ENST00000647611.1762No protein-
 
lncRNA
---
LINC00511-287ENST00000650194.2762No protein-
 
lncRNA
---
LINC00511-214ENST00000581801.6749No protein-
 
lncRNA
--TSL:3
LINC00511-231ENST00000648203.1746No protein-
 
lncRNA
---
LINC00511-248ENST00000648907.1736No protein-
 
lncRNA
---
LINC00511-210ENST00000580861.2701No protein-
 
lncRNA
--GENCODE basicTSL:4
LINC00511-301ENST00000650510.1692No protein-
 
lncRNA
---
LINC00511-285ENST00000650180.1691No protein-
 
lncRNA
---
LINC00511-250ENST00000648954.1689No protein-
 
lncRNA
---
LINC00511-208ENST00000580199.7678No protein-
 
lncRNA
--TSL:3
LINC00511-228ENST00000648088.1669No protein-
 
lncRNA
---
LINC00511-232ENST00000648220.1668No protein-
 
lncRNA
---
LINC00511-204ENST00000577828.6656No protein-
 
lncRNA
--TSL:3
LINC00511-304ENST00000650570.1617No protein-
 
lncRNA
---
LINC00511-209ENST00000580500.5561No protein-
 
lncRNA
--TSL:4
LINC00511-203ENST00000577773.2532No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-303ENST00000650554.1514No protein-
 
lncRNA
---
LINC00511-259ENST00000649332.1509No protein-
 
lncRNA
---
LINC00511-247ENST00000648840.1502No protein-
 
lncRNA
---
LINC00511-222ENST00000647735.1496No protein-
 
lncRNA
--GENCODE basic
LINC00511-211ENST00000580948.1475No protein-
 
lncRNA
--TSL:3
LINC00511-269ENST00000649595.2471No protein-
 
lncRNA
---
LINC00511-206ENST00000579631.2448No protein-
 
lncRNA
--TSL:2
LINC00511-293ENST00000650357.1325No protein-
 
lncRNA
---
LINC00511-251ENST00000649013.1266No protein-
 
lncRNA
---
LINC00511-242ENST00000648559.1261No protein-
 
lncRNA
---
LINC00511-300ENST00000650499.1231No protein-
 
lncRNA
---
LINC00511-258ENST00000649330.1230No protein-
 
lncRNA
---
LINC00511-239ENST00000648500.1219No protein-
 
lncRNA
---
LINC00511-207ENST00000580175.2208No protein-
 
lncRNA
--TSL:3
LINC00511-217ENST00000584749.2173No protein-
 
lncRNA
--TSL:3
LINC00511-305ENST00000650600.1117No protein-
 
lncRNA
---
LINC00511-223ENST00000647850.1111No protein-
 
lncRNA
---
LINC00511-282ENST00000650121.1108No protein-
 
lncRNA
---
Description

HOXD antisense growth-associated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:43755]

Gene Synonyms

HOXD-AS1, MIR7704HG, Mdgt

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
HAGLR-207ENST00000452365.24183No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:4
HAGLR-202ENST00000416928.84095No protein-
 
lncRNA
--TSL:1
HAGLR-217ENST00000669485.14042No protein-
 
lncRNA
---
HAGLR-213ENST00000642267.23826No protein-
 
lncRNA
---
HAGLR-214ENST00000643050.23804No protein-
 
lncRNA
---
HAGLR-215ENST00000644334.13327No protein-
 
lncRNA
---
HAGLR-216ENST00000645228.12847No protein-
 
lncRNA
---
HAGLR-203ENST00000417086.61322No protein-
 
lncRNA
--TSL:2
HAGLR-205ENST00000436126.5945No protein-
 
lncRNA
--TSL:4
HAGLR-208ENST00000456876.1636No protein-
 
lncRNA
--TSL:2
HAGLR-204ENST00000425005.5623No protein-
 
lncRNA
--TSL:3
HAGLR-211ENST00000549329.5609No protein-
 
lncRNA
--TSL:4
HAGLR-209ENST00000546798.5581No protein-
 
lncRNA
--TSL:3
HAGLR-212ENST00000552156.5576No protein-
 
lncRNA
--TSL:4
HAGLR-206ENST00000447538.6558No protein-
 
lncRNA
--TSL:4
HAGLR-201ENST00000413969.6465No protein-
 
lncRNA
--TSL:3
HAGLR-210ENST00000547207.2454No protein-
 
lncRNA
--TSL:2
Statistics

Exons: 3, Coding exons: 0, Transcript length: 581 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000546798.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x30e248f0)