Human (GRCh38.p14)
Description

intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]

Gene Synonyms

ITSN, MGC134948, MGC134949, SH3D1A, SH3P17

Location
About this transcript

This transcript has 30 exons, is annotated with 67 domains and features, is associated with 84179 variant alleles and maps to 1170 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000381318.8ITSN1-206169721721aaENSP00000370719.3
 
Protein coding
CCDS33545Q15811-1 NM_003024.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000381285.8ITSN1-2046107877aaENSP00000370685.5
 
Protein coding
A8CTZ0 -GENCODE basicTSL:5
ENST00000399367.7ITSN1-21257221716aaENSP00000382301.3
 
Protein coding
CCDS82664Q15811-8 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000381291.8ITSN1-20554371220aaENSP00000370691.4
 
Protein coding
CCDS33546Q15811-2 -GENCODE basicTSL:1
ENST00000399352.5ITSN1-20954081215aaENSP00000382289.1
 
Protein coding
CCDS82663Q15811-7 -GENCODE basicTSL:1
ENST00000399349.5ITSN1-20851911144aaENSP00000382286.1
 
Protein coding
CCDS82665Q15811-3 -GENCODE basicTSL:1
ENST00000399355.6ITSN1-21140031149aaENSP00000382292.2
 
Protein coding
CCDS82661F8W7U0 -GENCODE basicTSL:1
ENST00000399353.5ITSN1-21039131178aaENSP00000382290.1
 
Protein coding
CCDS82666Q15811-10 -GENCODE basicTSL:1
ENST00000399338.8ITSN1-20731151020aaENSP00000382275.4
 
Protein coding
Q15811-5 -GENCODE basicTSL:1
ENST00000379960.9ITSN1-2013026237aaENSP00000369294.6
 
Protein coding
D6PAW0 -GENCODE basicTSL:1
ENST00000381283.7ITSN1-2021116361aaENSP00000370683.3
 
Protein coding
C9JQZ7 -TSL:5CDS 3' incomplete
ENST00000381284.7ITSN1-203949317aaENSP00000370684.3
 
Protein coding
H0Y3G5 -TSL:1CDS 5' and 3' incomplete
ENST00000440794.2ITSN1-218936260aaENSP00000396054.1
 
Protein coding
H0Y523 -TSL:5CDS 5' incomplete
ENST00000444491.5ITSN1-219827115aaENSP00000400079.1
 
Protein coding
C9J1A4 -TSL:4CDS 3' incomplete
ENST00000415023.1ITSN1-213519173aaENSP00000409800.1
 
Protein coding
Q6J334 -TSL:1CDS 5' and 3' incomplete
ENST00000451686.5ITSN1-22050178aaENSP00000407132.1
 
Protein coding
C9JXS9 -TSL:4CDS 3' incomplete
ENST00000456489.1ITSN1-22148560aaENSP00000411464.1
 
Protein coding
H7C3F1 -TSL:2CDS 5' incomplete
ENST00000419241.1ITSN1-21477977aaENSP00000415302.1
 
Nonsense mediated decay
H7C429 -TSL:5CDS 5' incomplete
ENST00000437126.5ITSN1-21751477aaENSP00000413290.1
 
Nonsense mediated decay
H0Y7J7 -TSL:5CDS 5' incomplete
ENST00000420666.1ITSN1-21542266aaENSP00000408319.1
 
Nonsense mediated decay
H0Y6W3 -TSL:5CDS 5' incomplete
ENST00000488166.1ITSN1-230986No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000479424.5ITSN1-228647No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000495656.5ITSN1-232535No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000472548.5ITSN1-225529No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000470742.5ITSN1-224474No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000428240.1ITSN1-216213No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000489261.1ITSN1-2311108No protein-
 
Retained intron
--TSL:1
ENST00000462212.5ITSN1-2221102No protein-
 
Retained intron
--TSL:1
ENST00000487427.5ITSN1-229805No protein-
 
Retained intron
--TSL:1
ENST00000475422.5ITSN1-227798No protein-
 
Retained intron
--TSL:1
ENST00000474132.1ITSN1-226628No protein-
 
Retained intron
--TSL:3
ENST00000465143.1ITSN1-223614No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 30, Coding exons: 29, Transcript length: 5,437 bps, Translation length: 1,220 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15811

CCDS

This transcript is a member of the Human CCDS set: CCDS33546

Transcript Support Level (TSL)

TSL:1

Version

ENST00000381291.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.