Human (GRCh38.p14)
Description

SKI2 subunit of superkiller complex [Source:HGNC Symbol;Acc:HGNC:10898]

Gene Synonyms

170A, DDX13, HLP, SKI2, SKI2W, SKIV2, SKIV2L, SKIV2L1

Location
About this transcript

This transcript has 28 exons, is annotated with 30 domains and features, is associated with 5106 variant alleles and maps to 2846 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000375394.7SKIC2-20137951246aaENSP00000364543.2
 
Protein coding
CCDS4731A0A1U9X8J1 Q15477 NM_006929.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000491994.2SKIC2-21338961183aaENSP00000417586.2
 
Protein coding
H7C4L3 -GENCODE basicTSL:2
ENST00000697840.1SKIC2-22538221258aaENSP00000513458.1
 
Protein coding
A0A8V8TLA2 -GENCODE basic
ENST00000697831.1SKIC2-21638141223aaENSP00000513453.1
 
Protein coding
A0A8V8TL97 -GENCODE basic
ENST00000697838.1SKIC2-22337061201aaENSP00000513457.1
 
Protein coding
A0A8V8TN04 -GENCODE basic
ENST00000697835.1SKIC2-2203876166aaENSP00000513455.1
 
Nonsense mediated decay
A0A8V8TMR3 --
ENST00000483553.6SKIC2-20937371031aaENSP00000420332.2
 
Nonsense mediated decay
H7C5N0 -TSL:5
ENST00000697833.1SKIC2-21837221033aaENSP00000513454.1
 
Nonsense mediated decay
A0A8V8TLC0 --
ENST00000697837.1SKIC2-2223715932aaENSP00000513456.1
 
Nonsense mediated decay
A0A8V8TLR3 --
ENST00000461073.6SKIC2-2023639230aaENSP00000419905.1
 
Nonsense mediated decay
B4E0B4 -TSL:2
ENST00000474839.5SKIC2-208337869aaENSP00000420470.1
 
Nonsense mediated decay
F8WDE8 -TSL:2
ENST00000488648.5SKIC2-212720No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000471818.1SKIC2-207706No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000461915.5SKIC2-203691No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000470453.1SKIC2-206455No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000697841.1SKIC2-2264667No protein-
 
Retained intron
---
ENST00000697839.1SKIC2-2244561No protein-
 
Retained intron
---
ENST00000465703.5SKIC2-2044507No protein-
 
Retained intron
--TSL:1
ENST00000697834.1SKIC2-2194466No protein-
 
Retained intron
---
ENST00000485349.6SKIC2-2114223No protein-
 
Retained intron
--TSL:2
ENST00000697836.1SKIC2-2214077No protein-
 
Retained intron
---
ENST00000494058.6SKIC2-2154066No protein-
 
Retained intron
--TSL:2
ENST00000697842.1SKIC2-2274019No protein-
 
Retained intron
---
ENST00000697832.1SKIC2-2173917No protein-
 
Retained intron
---
ENST00000484835.1SKIC2-210931No protein-
 
Retained intron
--TSL:2
ENST00000492900.1SKIC2-214686No protein-
 
Retained intron
--TSL:3
ENST00000466290.1SKIC2-205583No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 28, Coding exons: 28, Transcript length: 3,795 bps, Translation length: 1,246 residues

MANE

This MANE Select transcript contains ENSP00000364543 and matches to NM_006929.5 and NP_008860.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15477

CCDS

This transcript is a member of the Human CCDS set: CCDS4731

Transcript Support Level (TSL)

TSL:1

Version

ENST00000375394.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.