Human (GRCh38.p14)
Description

DEAD-box helicase 42 [Source:HGNC Symbol;Acc:HGNC:18676]

Gene Synonyms

RHELP, RNAHP, SF3B125, SF3B8

Location
About this transcript

This transcript has 3 exons, is associated with 3032 variant alleles and maps to 133 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000389924.7DDX42-2023959938aaENSP00000374574.2
 
Protein coding
CCDS32704Q86XP3-1 NM_203499.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000578681.5DDX42-2074337938aaENSP00000464050.1
 
Protein coding
CCDS32704Q86XP3-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000583590.5DDX42-2154148938aaENSP00000463561.1
 
Protein coding
CCDS32704Q86XP3-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000359353.9DDX42-2012783819aaENSP00000352308.5
 
Protein coding
Q86XP3-2 -GENCODE basicTSL:5
ENST00000581135.5DDX42-211589104aaENSP00000464232.1
 
Protein coding
J3QRI2 -TSL:4CDS 3' incomplete
ENST00000577940.6DDX42-203142799aaENSP00000461957.1
 
Nonsense mediated decay
J3KRE3 -TSL:5CDS 5' incomplete
ENST00000578137.5DDX42-205857159aaENSP00000463038.1
 
Nonsense mediated decay
J3KTK9 -TSL:3
ENST00000584261.5DDX42-21751070aaENSP00000462174.1
 
Nonsense mediated decay
J3KRV0 -TSL:3CDS 5' incomplete
ENST00000582985.1DDX42-214543No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000584010.5DDX42-2163929No protein-
 
Retained intron
--TSL:2
ENST00000578593.1DDX42-2062919No protein-
 
Retained intron
--TSL:2
ENST00000581767.1DDX42-2132244No protein-
 
Retained intron
--TSL:NA
ENST00000579511.1DDX42-208594No protein-
 
Retained intron
--TSL:5
ENST00000584951.1DDX42-218591No protein-
 
Retained intron
--TSL:2
ENST00000577978.1DDX42-204581No protein-
 
Retained intron
--TSL:5
ENST00000579539.1DDX42-209571No protein-
 
Retained intron
--TSL:2
ENST00000580108.1DDX42-210545No protein-
 
Retained intron
--TSL:3
ENST00000581477.1DDX42-212494No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 3, Coding exons: 0, Transcript length: 594 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000579511.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.