Human (GRCh38.p14)
Description

collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]

Location
About this transcript

This transcript has 10 exons, is associated with 11419 variant alleles and maps to 391 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000645393.2COL13A1-2153148728aaENSP00000496051.1
 
Protein coding
CCDS91251A0A2R8YGI3 NM_001368882.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1
ENST00000398978.8COL13A1-2053115717aaENSP00000381949.3
 
Protein coding
CCDS44419Q5TAT6-1 -GENCODE basicTSL:5
ENST00000354547.7COL13A1-2013027695aaENSP00000346553.3
 
Protein coding
CCDS44424Q5TAT6-2 -GENCODE basicTSL:5
ENST00000357811.8COL13A1-2022999684aaENSP00000350463.4
 
Protein coding
CCDS91252A0A6E1W314 -GENCODE basicTSL:5
ENST00000673842.1COL13A1-2242519658aaENSP00000501058.1
 
Protein coding
A0A669KAZ4 -GENCODE basic
ENST00000673641.2COL13A1-2172391663aaENSP00000501125.2
 
Protein coding
A0A669KB55 -GENCODE basic
ENST00000674121.1COL13A1-2342386628aaENSP00000501084.1
 
Protein coding
CCDS91254A0A669KB16 -GENCODE basic
ENST00000673628.2COL13A1-2162372651aaENSP00000501050.2
 
Protein coding
CCDS91253A0A669KB28 -GENCODE basic
ENST00000520267.5COL13A1-2132276645aaENSP00000428057.1
 
Protein coding
CCDS44427Q5TAT6-10 -GENCODE basicTSL:5
ENST00000522165.5COL13A1-2142061686aaENSP00000428342.1
 
Protein coding
CCDS44425Q5TAT6-8 -GENCODE basicTSL:5
ENST00000517713.5COL13A1-2102007668aaENSP00000430061.1
 
Protein coding
CCDS44423Q5TAT6-4 -GENCODE basicTSL:5
ENST00000520133.5COL13A1-2121833610aaENSP00000430173.1
 
Protein coding
CCDS44428Q5TAT6-11 -GENCODE basicTSL:5
ENST00000673802.2COL13A1-2221351450aaENSP00000501147.2
 
Protein coding
A0A669KB79 -CDS 3' incomplete
ENST00000398975.6COL13A1-2041057247aaENSP00000381947.2
 
Protein coding
H7BYT9 -TSL:5CDS 5' incomplete
ENST00000673931.1COL13A1-2281050339aaENSP00000501097.1
 
Protein coding
A0A669KB25 -CDS 5' incomplete
ENST00000673768.1COL13A1-221937178aaENSP00000501247.1
 
Protein coding
A0A669KBF9 -CDS 5' incomplete
ENST00000456019.1COL13A1-206749174aaENSP00000388774.1
 
Protein coding
H7BZB6 -TSL:2CDS 5' incomplete
ENST00000673977.1COL13A1-230726114aaENSP00000501216.1
 
Protein coding
A0A669KBB8 -CDS 5' incomplete
ENST00000479733.5COL13A1-2082934582aaENSP00000430089.1
 
Nonsense mediated decay
E7EX21 -TSL:5
ENST00000682679.1COL13A1-2402594232aaENSP00000507571.1
 
Nonsense mediated decay
E7ES50 --
ENST00000673957.2COL13A1-2292482343aaENSP00000500966.2
 
Nonsense mediated decay
A0A669KA03 --
ENST00000674040.2COL13A1-2322480220aaENSP00000501131.2
 
Nonsense mediated decay
A0A669KB54 --
ENST00000398969.8COL13A1-2032462232aaENSP00000381941.5
 
Nonsense mediated decay
E7ES50 -TSL:5
ENST00000674008.2COL13A1-2312343220aaENSP00000501091.2
 
Nonsense mediated decay
A0A669KB54 --
ENST00000673914.2COL13A1-2262179308aaENSP00000501202.2
 
Nonsense mediated decay
A0A669KBE0 --
ENST00000674124.2COL13A1-235213187aaENSP00000501072.2
 
Nonsense mediated decay
A0A669KB39 -CDS 5' incomplete
ENST00000673736.2COL13A1-2192616No protein-
 
Protein coding CDS not defined
---
ENST00000684309.1COL13A1-2481993No protein-
 
Protein coding CDS not defined
---
ENST00000683633.1COL13A1-2441979No protein-
 
Protein coding CDS not defined
---
ENST00000683667.1COL13A1-2451928No protein-
 
Protein coding CDS not defined
---
ENST00000683194.1COL13A1-2431879No protein-
 
Protein coding CDS not defined
---
ENST00000674050.1COL13A1-2331876No protein-
 
Protein coding CDS not defined
---
ENST00000682048.1COL13A1-2361677No protein-
 
Protein coding CDS not defined
---
ENST00000683993.1COL13A1-2471610No protein-
 
Protein coding CDS not defined
---
ENST00000684376.1COL13A1-2501389No protein-
 
Protein coding CDS not defined
---
ENST00000682511.1COL13A1-2381355No protein-
 
Protein coding CDS not defined
---
ENST00000673681.1COL13A1-2181176No protein-
 
Protein coding CDS not defined
---
ENST00000673850.1COL13A1-2251136No protein-
 
Protein coding CDS not defined
---
ENST00000683952.1COL13A1-2461120No protein-
 
Protein coding CDS not defined
---
ENST00000682817.1COL13A1-2421009No protein-
 
Protein coding CDS not defined
---
ENST00000682574.1COL13A1-239900No protein-
 
Protein coding CDS not defined
---
ENST00000682702.1COL13A1-241847No protein-
 
Protein coding CDS not defined
---
ENST00000684323.1COL13A1-249595No protein-
 
Protein coding CDS not defined
---
ENST00000484990.1COL13A1-209360No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000673927.1COL13A1-227346No protein-
 
Protein coding CDS not defined
---
ENST00000673755.1COL13A1-220299No protein-
 
Protein coding CDS not defined
---
ENST00000518052.1COL13A1-211290No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000478219.2COL13A1-2073396No protein-
 
Retained intron
--TSL:2
ENST00000673830.1COL13A1-2232265No protein-
 
Retained intron
---
ENST00000684387.1COL13A1-2511403No protein-
 
Retained intron
---
ENST00000682251.1COL13A1-2371001No protein-
 
Retained intron
---
Statistics

Exons: 10, Coding exons: 0, Transcript length: 2,616 bps,

Version

ENST00000673736.2

Type

Protein coding CDS not defined

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

RNA-Seq supported only [Definitions]