Human (GRCh38.p14)
Description

collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]

Location
About this transcript

This transcript has 19 exons, is annotated with 16 domains and features, is associated with 17347 variant alleles and maps to 425 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000645393.2COL13A1-2153148728aaENSP00000496051.1
 
Protein coding
CCDS91251A0A2R8YGI3 NM_001368882.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1
ENST00000398978.8COL13A1-2053115717aaENSP00000381949.3
 
Protein coding
CCDS44419Q5TAT6-1 -GENCODE basicTSL:5
ENST00000354547.7COL13A1-2013027695aaENSP00000346553.3
 
Protein coding
CCDS44424Q5TAT6-2 -GENCODE basicTSL:5
ENST00000357811.8COL13A1-2022999684aaENSP00000350463.4
 
Protein coding
CCDS91252A0A6E1W314 -GENCODE basicTSL:5
ENST00000673842.1COL13A1-2242519658aaENSP00000501058.1
 
Protein coding
A0A669KAZ4 -GENCODE basic
ENST00000673641.2COL13A1-2172391663aaENSP00000501125.2
 
Protein coding
A0A669KB55 -GENCODE basic
ENST00000674121.1COL13A1-2342386628aaENSP00000501084.1
 
Protein coding
CCDS91254A0A669KB16 -GENCODE basic
ENST00000673628.2COL13A1-2162372651aaENSP00000501050.2
 
Protein coding
CCDS91253A0A669KB28 -GENCODE basic
ENST00000520267.5COL13A1-2132276645aaENSP00000428057.1
 
Protein coding
CCDS44427Q5TAT6-10 -GENCODE basicTSL:5
ENST00000522165.5COL13A1-2142061686aaENSP00000428342.1
 
Protein coding
CCDS44425Q5TAT6-8 -GENCODE basicTSL:5
ENST00000517713.5COL13A1-2102007668aaENSP00000430061.1
 
Protein coding
CCDS44423Q5TAT6-4 -GENCODE basicTSL:5
ENST00000520133.5COL13A1-2121833610aaENSP00000430173.1
 
Protein coding
CCDS44428Q5TAT6-11 -GENCODE basicTSL:5
ENST00000673802.2COL13A1-2221351450aaENSP00000501147.2
 
Protein coding
A0A669KB79 -CDS 3' incomplete
ENST00000398975.6COL13A1-2041057247aaENSP00000381947.2
 
Protein coding
H7BYT9 -TSL:5CDS 5' incomplete
ENST00000673931.1COL13A1-2281050339aaENSP00000501097.1
 
Protein coding
A0A669KB25 -CDS 5' incomplete
ENST00000673768.1COL13A1-221937178aaENSP00000501247.1
 
Protein coding
A0A669KBF9 -CDS 5' incomplete
ENST00000456019.1COL13A1-206749174aaENSP00000388774.1
 
Protein coding
H7BZB6 -TSL:2CDS 5' incomplete
ENST00000673977.1COL13A1-230726114aaENSP00000501216.1
 
Protein coding
A0A669KBB8 -CDS 5' incomplete
ENST00000479733.5COL13A1-2082934582aaENSP00000430089.1
 
Nonsense mediated decay
E7EX21 -TSL:5
ENST00000682679.1COL13A1-2402594232aaENSP00000507571.1
 
Nonsense mediated decay
E7ES50 --
ENST00000673957.2COL13A1-2292482343aaENSP00000500966.2
 
Nonsense mediated decay
A0A669KA03 --
ENST00000674040.2COL13A1-2322480220aaENSP00000501131.2
 
Nonsense mediated decay
A0A669KB54 --
ENST00000398969.8COL13A1-2032462232aaENSP00000381941.5
 
Nonsense mediated decay
E7ES50 -TSL:5
ENST00000674008.2COL13A1-2312343220aaENSP00000501091.2
 
Nonsense mediated decay
A0A669KB54 --
ENST00000673914.2COL13A1-2262179308aaENSP00000501202.2
 
Nonsense mediated decay
A0A669KBE0 --
ENST00000674124.2COL13A1-235213187aaENSP00000501072.2
 
Nonsense mediated decay
A0A669KB39 -CDS 5' incomplete
ENST00000673736.2COL13A1-2192616No protein-
 
Protein coding CDS not defined
---
ENST00000684309.1COL13A1-2481993No protein-
 
Protein coding CDS not defined
---
ENST00000683633.1COL13A1-2441979No protein-
 
Protein coding CDS not defined
---
ENST00000683667.1COL13A1-2451928No protein-
 
Protein coding CDS not defined
---
ENST00000683194.1COL13A1-2431879No protein-
 
Protein coding CDS not defined
---
ENST00000674050.1COL13A1-2331876No protein-
 
Protein coding CDS not defined
---
ENST00000682048.1COL13A1-2361677No protein-
 
Protein coding CDS not defined
---
ENST00000683993.1COL13A1-2471610No protein-
 
Protein coding CDS not defined
---
ENST00000684376.1COL13A1-2501389No protein-
 
Protein coding CDS not defined
---
ENST00000682511.1COL13A1-2381355No protein-
 
Protein coding CDS not defined
---
ENST00000673681.1COL13A1-2181176No protein-
 
Protein coding CDS not defined
---
ENST00000673850.1COL13A1-2251136No protein-
 
Protein coding CDS not defined
---
ENST00000683952.1COL13A1-2461120No protein-
 
Protein coding CDS not defined
---
ENST00000682817.1COL13A1-2421009No protein-
 
Protein coding CDS not defined
---
ENST00000682574.1COL13A1-239900No protein-
 
Protein coding CDS not defined
---
ENST00000682702.1COL13A1-241847No protein-
 
Protein coding CDS not defined
---
ENST00000684323.1COL13A1-249595No protein-
 
Protein coding CDS not defined
---
ENST00000484990.1COL13A1-209360No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000673927.1COL13A1-227346No protein-
 
Protein coding CDS not defined
---
ENST00000673755.1COL13A1-220299No protein-
 
Protein coding CDS not defined
---
ENST00000518052.1COL13A1-211290No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000478219.2COL13A1-2073396No protein-
 
Retained intron
--TSL:2
ENST00000673830.1COL13A1-2232265No protein-
 
Retained intron
---
ENST00000684387.1COL13A1-2511403No protein-
 
Retained intron
---
ENST00000682251.1COL13A1-2371001No protein-
 
Retained intron
---
Statistics

Exons: 19, Coding exons: 19, Transcript length: 1,050 bps, Translation length: 339 residues

Incomplete CDS

CDS 5' incomplete

Version

ENST00000673931.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]