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EnsemblEnsembl Home
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000626948.3SOX2-OT-2401584No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
ENST00000656613.1SOX2-OT-2924289No protein-
 
lncRNA
--GENCODE basic
ENST00000670501.1SOX2-OT-3024282No protein-
 
lncRNA
---
ENST00000665187.1SOX2-OT-2984263No protein-
 
lncRNA
--GENCODE basic
ENST00000671456.1SOX2-OT-3034240No protein-
 
lncRNA
---
ENST00000657986.1SOX2-OT-2934162No protein-
 
lncRNA
---
ENST00000646698.1SOX2-OT-2824109No protein-
 
lncRNA
---
ENST00000660576.1SOX2-OT-2944101No protein-
 
lncRNA
---
ENST00000600801.7SOX2-OT-2344085No protein-
 
lncRNA
--TSL:5
ENST00000661842.1SOX2-OT-2954077No protein-
 
lncRNA
---
ENST00000654649.1SOX2-OT-2914032No protein-
 
lncRNA
---
ENST00000596250.7SOX2-OT-2253985No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000498731.6SOX2-OT-2183964No protein-
 
lncRNA
--TSL:1
ENST00000645583.2SOX2-OT-2753870No protein-
 
lncRNA
---
ENST00000646841.2SOX2-OT-2843868No protein-
 
lncRNA
---
ENST00000654538.1SOX2-OT-2903844No protein-
 
lncRNA
--GENCODE basic
ENST00000665033.1SOX2-OT-2963529No protein-
 
lncRNA
---
ENST00000665112.1SOX2-OT-2973462No protein-
 
lncRNA
---
ENST00000647055.1SOX2-OT-2873274No protein-
 
lncRNA
--GENCODE basic
ENST00000476964.6SOX2-OT-2073226No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000647034.2SOX2-OT-2863006No protein-
 
lncRNA
--GENCODE basic
ENST00000493116.6SOX2-OT-2142779No protein-
 
lncRNA
--TSL:4
ENST00000643236.2SOX2-OT-2672454No protein-
 
lncRNA
--GENCODE basic
ENST00000665485.1SOX2-OT-2992297No protein-
 
lncRNA
--GENCODE basic
ENST00000642685.1SOX2-OT-2632276No protein-
 
lncRNA
--GENCODE basic
ENST00000642301.2SOX2-OT-2602271No protein-
 
lncRNA
--GENCODE basic
ENST00000492337.6SOX2-OT-2132184No protein-
 
lncRNA
--TSL:2
ENST00000667332.1SOX2-OT-3002112No protein-
 
lncRNA
---
ENST00000646296.2SOX2-OT-2792094No protein-
 
lncRNA
---
ENST00000642652.2SOX2-OT-2622042No protein-
 
lncRNA
--GENCODE basic
ENST00000646949.2SOX2-OT-2851980No protein-
 
lncRNA
--GENCODE basic
ENST00000643769.1SOX2-OT-2691967No protein-
 
lncRNA
--GENCODE basic
ENST00000644582.1SOX2-OT-2721884No protein-
 
lncRNA
--GENCODE basic
ENST00000466034.7SOX2-OT-2031772No protein-
 
lncRNA
--TSL:1
ENST00000646683.1SOX2-OT-2811766No protein-
 
lncRNA
--GENCODE basic
ENST00000644358.1SOX2-OT-2711703No protein-
 
lncRNA
--GENCODE basic
ENST00000628810.2SOX2-OT-2481675No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000643667.1SOX2-OT-2681622No protein-
 
lncRNA
---
ENST00000645423.2SOX2-OT-2741583No protein-
 
lncRNA
---
ENST00000642218.1SOX2-OT-2591500No protein-
 
lncRNA
--GENCODE basic
ENST00000642922.1SOX2-OT-2651468No protein-
 
lncRNA
--GENCODE basic
ENST00000642823.1SOX2-OT-2641444No protein-
 
lncRNA
--GENCODE basic
ENST00000626299.4SOX2-OT-2371412No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000646508.1SOX2-OT-2801390No protein-
 
lncRNA
--GENCODE basic
ENST00000597347.5SOX2-OT-2261342No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000690586.1SOX2-OT-3131327No protein-
 
lncRNA
--GENCODE basic
ENST00000642429.1SOX2-OT-2611279No protein-
 
lncRNA
---
ENST00000644732.1SOX2-OT-2731242No protein-
 
lncRNA
---
ENST00000691318.1SOX2-OT-3141240No protein-
 
lncRNA
---
ENST00000493521.5SOX2-OT-2151239No protein-
 
lncRNA
--TSL:3
ENST00000647552.1SOX2-OT-2891238No protein-
 
lncRNA
---
ENST00000645960.1SOX2-OT-2761199No protein-
 
lncRNA
---
ENST00000485035.3SOX2-OT-2091162No protein-
 
lncRNA
--TSL:4
ENST00000644304.1SOX2-OT-2701115No protein-
 
lncRNA
---
ENST00000643131.2SOX2-OT-2661097No protein-
 
lncRNA
---
ENST00000647179.1SOX2-OT-2881068No protein-
 
lncRNA
---
ENST00000693669.1SOX2-OT-3151055No protein-
 
lncRNA
---
ENST00000491282.6SOX2-OT-2121040No protein-
 
lncRNA
--TSL:1
ENST00000627501.4SOX2-OT-2411036No protein-
 
lncRNA
--TSL:5
ENST00000630482.2SOX2-OT-2551012No protein-
 
lncRNA
--TSL:5
ENST00000646712.1SOX2-OT-283989No protein-
 
lncRNA
---
ENST00000476125.5SOX2-OT-206979No protein-
 
lncRNA
--TSL:3
ENST00000631025.2SOX2-OT-258954No protein-
 
lncRNA
--TSL:5
ENST00000630553.1SOX2-OT-256905No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000477928.1SOX2-OT-208902No protein-
 
lncRNA
--TSL:2
ENST00000627530.3SOX2-OT-242873No protein-
 
lncRNA
--TSL:5
ENST00000597828.5SOX2-OT-228864No protein-
 
lncRNA
--TSL:5
ENST00000685767.1SOX2-OT-306859No protein-
 
lncRNA
---
ENST00000595084.3SOX2-OT-222850No protein-
 
lncRNA
--TSL:5
ENST00000628211.2SOX2-OT-244847No protein-
 
lncRNA
--TSL:5
ENST00000599082.2SOX2-OT-231836No protein-
 
lncRNA
--TSL:5
ENST00000685509.1SOX2-OT-305831No protein-
 
lncRNA
---
ENST00000629781.4SOX2-OT-252818No protein-
 
lncRNA
--TSL:5
ENST00000628496.3SOX2-OT-247798No protein-
 
lncRNA
--TSL:5
ENST00000646056.1SOX2-OT-278796No protein-
 
lncRNA
---
ENST00000686782.1SOX2-OT-308794No protein-
 
lncRNA
---
ENST00000688647.1SOX2-OT-310792No protein-
 
lncRNA
---
ENST00000600386.6SOX2-OT-232789No protein-
 
lncRNA
--TSL:5
ENST00000629112.4SOX2-OT-249782No protein-
 
lncRNA
--TSL:5
ENST00000600778.3SOX2-OT-233762No protein-
 
lncRNA
--TSL:5
ENST00000593549.6SOX2-OT-220753No protein-
 
lncRNA
--TSL:5
ENST00000487240.3SOX2-OT-210751No protein-
 
lncRNA
--TSL:5
ENST00000630887.3SOX2-OT-257745No protein-
 
lncRNA
--TSL:5
ENST00000628343.3SOX2-OT-245743No protein-
 
lncRNA
--TSL:5
ENST00000626802.2SOX2-OT-239737No protein-
 
lncRNA
--TSL:5
ENST00000595313.5SOX2-OT-224716No protein-
 
lncRNA
--TSL:5
ENST00000689495.1SOX2-OT-311705No protein-
 
lncRNA
---
ENST00000685088.1SOX2-OT-304694No protein-
 
lncRNA
---
ENST00000627738.1SOX2-OT-243692No protein-
 
lncRNA
--TSL:5
ENST00000686214.1SOX2-OT-307679No protein-
 
lncRNA
---
ENST00000629830.3SOX2-OT-253677No protein-
 
lncRNA
--TSL:5
ENST00000594942.5SOX2-OT-221675No protein-
 
lncRNA
--TSL:5
ENST00000668295.2SOX2-OT-301671No protein-
 
lncRNA
---
ENST00000626619.2SOX2-OT-238660No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630150.2SOX2-OT-254649No protein-
 
lncRNA
--TSL:5
ENST00000597651.6SOX2-OT-227626No protein-
 
lncRNA
--TSL:5
ENST00000693697.1SOX2-OT-316610No protein-
 
lncRNA
---
ENST00000460739.5SOX2-OT-201609No protein-
 
lncRNA
--TSL:4
ENST00000689942.1SOX2-OT-312585No protein-
 
lncRNA
---
ENST00000595287.1SOX2-OT-223581No protein-
 
lncRNA
--TSL:5
ENST00000497122.5SOX2-OT-216578No protein-
 
lncRNA
--TSL:4
ENST00000629273.2SOX2-OT-250575No protein-
 
lncRNA
--TSL:5
ENST00000629552.2SOX2-OT-251572No protein-
 
lncRNA
--TSL:5
ENST00000687464.1SOX2-OT-309569No protein-
 
lncRNA
---
ENST00000461063.6SOX2-OT-202566No protein-
 
lncRNA
--TSL:3
ENST00000469278.5SOX2-OT-204561No protein-
 
lncRNA
--TSL:4
ENST00000498226.5SOX2-OT-217560No protein-
 
lncRNA
--TSL:4
ENST00000598474.4SOX2-OT-229512No protein-
 
lncRNA
--TSL:5
ENST00000625581.2SOX2-OT-236495No protein-
 
lncRNA
--TSL:5
ENST00000600962.6SOX2-OT-235469No protein-
 
lncRNA
--TSL:5
ENST00000593330.1SOX2-OT-219468No protein-
 
lncRNA
--TSL:3
ENST00000472856.1SOX2-OT-205454No protein-
 
lncRNA
--TSL:2
ENST00000628347.1SOX2-OT-246445No protein-
 
lncRNA
--TSL:5
ENST00000645983.1SOX2-OT-277392No protein-
 
lncRNA
---
ENST00000490005.2SOX2-OT-211383No protein-
 
lncRNA
--TSL:2
ENST00000598867.1SOX2-OT-230348No protein-
 
lncRNA
--TSL:5
Description

small nucleolar RNA host gene 17 [Source:HGNC Symbol;Acc:HGNC:48600]

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000449469.5SNHG17-2072138No protein-
 
Retained intron
--TSL:2
ENST00000414142.5SNHG17-2022102No protein-
 
Retained intron
--TSL:2
ENST00000424235.1SNHG17-205764No protein-
 
Retained intron
--TSL:2
ENST00000654008.2SNHG17-2151238No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000655692.1SNHG17-2232643No protein-
 
lncRNA
--GENCODE basic
ENST00000668482.2SNHG17-2802360No protein-
 
lncRNA
--GENCODE basic
ENST00000693250.1SNHG17-3072294No protein-
 
lncRNA
---
ENST00000667282.1SNHG17-2742292No protein-
 
lncRNA
---
ENST00000668042.1SNHG17-2782261No protein-
 
lncRNA
---
ENST00000654389.1SNHG17-2182246No protein-
 
lncRNA
---
ENST00000691386.1SNHG17-3042155No protein-
 
lncRNA
---
ENST00000657868.1SNHG17-2302120No protein-
 
lncRNA
--GENCODE basic
ENST00000669405.1SNHG17-2842119No protein-
 
lncRNA
---
ENST00000664626.1SNHG17-2582103No protein-
 
lncRNA
--GENCODE basic
ENST00000686814.1SNHG17-2912102No protein-
 
lncRNA
--GENCODE basic
ENST00000654853.1SNHG17-2192079No protein-
 
lncRNA
---
ENST00000658455.1SNHG17-2352067No protein-
 
lncRNA
--GENCODE basic
ENST00000659400.1SNHG17-2412047No protein-
 
lncRNA
---
ENST00000656023.1SNHG17-2242023No protein-
 
lncRNA
---
ENST00000658076.1SNHG17-2322010No protein-
 
lncRNA
--GENCODE basic
ENST00000658051.1SNHG17-2311979No protein-
 
lncRNA
---
ENST00000660189.1SNHG17-2441977No protein-
 
lncRNA
--GENCODE basic
ENST00000659102.1SNHG17-2381884No protein-
 
lncRNA
---
ENST00000658141.1SNHG17-2331882No protein-
 
lncRNA
---
ENST00000666225.1SNHG17-2671798No protein-
 
lncRNA
---
ENST00000662982.2SNHG17-2511728No protein-
 
lncRNA
---
ENST00000666806.1SNHG17-2721692No protein-
 
lncRNA
---
ENST00000659753.1SNHG17-2421691No protein-
 
lncRNA
---
ENST00000657429.1SNHG17-2271660No protein-
 
lncRNA
---
ENST00000659186.1SNHG17-2391582No protein-
 
lncRNA
---
ENST00000665693.1SNHG17-2651507No protein-
 
lncRNA
---
ENST00000693665.1SNHG17-3081474No protein-
 
lncRNA
---
ENST00000660064.1SNHG17-2431444No protein-
 
lncRNA
---
ENST00000671309.1SNHG17-2891432No protein-
 
lncRNA
---
ENST00000661252.1SNHG17-2471364No protein-
 
lncRNA
--GENCODE basic
ENST00000667912.1SNHG17-2771332No protein-
 
lncRNA
---
ENST00000667188.1SNHG17-2731316No protein-
 
lncRNA
---
ENST00000691280.1SNHG17-3011314No protein-
 
lncRNA
---
ENST00000665735.1SNHG17-2661301No protein-
 
lncRNA
---
ENST00000664964.1SNHG17-2601291No protein-
 
lncRNA
---
ENST00000668054.2SNHG17-2791291No protein-
 
lncRNA
---
ENST00000653343.1SNHG17-2111279No protein-
 
lncRNA
---
ENST00000692262.1SNHG17-3051243No protein-
 
lncRNA
--GENCODE basic
ENST00000670958.1SNHG17-2871240No protein-
 
lncRNA
---
ENST00000664636.1SNHG17-2591230No protein-
 
lncRNA
---
ENST00000669033.1SNHG17-2811227No protein-
 
lncRNA
---
ENST00000653697.1SNHG17-2121215No protein-
 
lncRNA
---
ENST00000686145.1SNHG17-2901214No protein-
 
lncRNA
---
ENST00000665003.1SNHG17-2611212No protein-
 
lncRNA
---
ENST00000660885.2SNHG17-2461202No protein-
 
lncRNA
---
ENST00000658324.1SNHG17-2341201No protein-
 
lncRNA
---
ENST00000657843.1SNHG17-2291200No protein-
 
lncRNA
---
ENST00000670051.1SNHG17-2861195No protein-
 
lncRNA
---
ENST00000688133.1SNHG17-2951193No protein-
 
lncRNA
---
ENST00000669114.1SNHG17-2821191No protein-
 
lncRNA
---
ENST00000666268.2SNHG17-2681191No protein-
 
lncRNA
---
ENST00000666331.1SNHG17-2691189No protein-
 
lncRNA
---
ENST00000671249.1SNHG17-2881181No protein-
 
lncRNA
---
ENST00000688336.1SNHG17-2961179No protein-
 
lncRNA
---
ENST00000693227.1SNHG17-3061174No protein-
 
lncRNA
---
ENST00000658905.1SNHG17-2371173No protein-
 
lncRNA
---
ENST00000664073.2SNHG17-2571166No protein-
 
lncRNA
---
ENST00000657665.1SNHG17-2281154No protein-
 
lncRNA
---
ENST00000689917.1SNHG17-2981153No protein-
 
lncRNA
---
ENST00000658488.2SNHG17-2361129No protein-
 
lncRNA
---
ENST00000666419.1SNHG17-2701122No protein-
 
lncRNA
---
ENST00000693684.1SNHG17-3091117No protein-
 
lncRNA
---
ENST00000690361.1SNHG17-2991116No protein-
 
lncRNA
---
ENST00000651115.2SNHG17-2091111No protein-
 
lncRNA
---
ENST00000669137.1SNHG17-2831111No protein-
 
lncRNA
---
ENST00000687532.1SNHG17-2941102No protein-
 
lncRNA
---
ENST00000655311.1SNHG17-2211100No protein-
 
lncRNA
---
ENST00000686971.1SNHG17-2921086No protein-
 
lncRNA
---
ENST00000691314.1SNHG17-3021080No protein-
 
lncRNA
---
ENST00000663955.1SNHG17-2561078No protein-
 
lncRNA
---
ENST00000656320.1SNHG17-2251077No protein-
 
lncRNA
---
ENST00000665181.1SNHG17-2621044No protein-
 
lncRNA
---
ENST00000456953.7SNHG17-2081043No protein-
 
lncRNA
--TSL:3
ENST00000687490.1SNHG17-2931043No protein-
 
lncRNA
---
ENST00000657216.2SNHG17-2261034No protein-
 
lncRNA
---
ENST00000660558.2SNHG17-2451032No protein-
 
lncRNA
---
ENST00000665233.2SNHG17-2631026No protein-
 
lncRNA
---
ENST00000663540.2SNHG17-2541022No protein-
 
lncRNA
---
ENST00000665440.1SNHG17-2641022No protein-
 
lncRNA
---
ENST00000436764.7SNHG17-2061010No protein-
 
lncRNA
--TSL:5
ENST00000662572.1SNHG17-250998No protein-
 
lncRNA
---
ENST00000659255.1SNHG17-240993No protein-
 
lncRNA
---
ENST00000662213.1SNHG17-248991No protein-
 
lncRNA
---
ENST00000663187.1SNHG17-252969No protein-
 
lncRNA
---
ENST00000669480.1SNHG17-285968No protein-
 
lncRNA
---
ENST00000653938.1SNHG17-214960No protein-
 
lncRNA
---
ENST00000667835.1SNHG17-276954No protein-
 
lncRNA
---
ENST00000667412.1SNHG17-275954No protein-
 
lncRNA
---
ENST00000654092.1SNHG17-216953No protein-
 
lncRNA
---
ENST00000417578.7SNHG17-203934No protein-
 
lncRNA
--TSL:2
ENST00000691368.1SNHG17-303934No protein-
 
lncRNA
---
ENST00000689414.1SNHG17-297925No protein-
 
lncRNA
---
ENST00000655520.2SNHG17-222897No protein-
 
lncRNA
---
ENST00000653753.1SNHG17-213888No protein-
 
lncRNA
---
ENST00000662568.1SNHG17-249879No protein-
 
lncRNA
---
ENST00000654183.2SNHG17-217874No protein-
 
lncRNA
---
ENST00000663534.1SNHG17-253864No protein-
 
lncRNA
---
ENST00000663784.1SNHG17-255846No protein-
 
lncRNA
---
ENST00000653277.1SNHG17-210840No protein-
 
lncRNA
---
ENST00000690441.1SNHG17-300729No protein-
 
lncRNA
---
ENST00000655198.1SNHG17-220681No protein-
 
lncRNA
---
ENST00000423536.6SNHG17-204674No protein-
 
lncRNA
--TSL:2
ENST00000413755.5SNHG17-201648No protein-
 
lncRNA
--TSL:3
ENST00000666549.1SNHG17-271443No protein-
 
lncRNA
---
Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,332 bps,

Version

ENST00000667912.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x2824fb68)