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EnsemblEnsembl Home
Description

nuclear paraspeckle assembly transcript 1 [Source:HGNC Symbol;Acc:HGNC:30815]

Gene Synonyms

LINC00084, MENepsilon/beta, NCRNA00084, TncRNA, VINC

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000501122.2NEAT1-20222743No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:NA
ENST00000687132.1NEAT1-2113736No protein-
 
lncRNA
---
ENST00000685861.1NEAT1-2103732No protein-
 
lncRNA
---
ENST00000601801.3NEAT1-2033524No protein-
 
lncRNA
--GENCODE basicTSL:4
ENST00000499732.3NEAT1-2013441No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000670617.1NEAT1-2093301No protein-
 
lncRNA
---
ENST00000645023.1NEAT1-2073300No protein-
 
lncRNA
--GENCODE basic
ENST00000646243.1NEAT1-2082994No protein-
 
lncRNA
--GENCODE basic
ENST00000687943.1NEAT1-2121204No protein-
 
lncRNA
---
ENST00000642367.1NEAT1-2061145No protein-
 
lncRNA
--GENCODE basic
ENST00000693290.1NEAT1-2141116No protein-
 
lncRNA
---
ENST00000612303.2NEAT1-2041053No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000691530.1NEAT1-213683No protein-
 
lncRNA
---
ENST00000693747.1NEAT1-215683No protein-
 
lncRNA
---
ENST00000616315.2NEAT1-205512No protein-
 
lncRNA
--GENCODE basicTSL:2
Description

cathepsin H [Source:HGNC Symbol;Acc:HGNC:2535]

Gene Synonyms

ACC-4, ACC-5, ACC4, ACC5, CPSB

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000220166.10CTSH-2012145335aaENSP00000220166.6
 
Protein coding
CCDS10308P09668 NM_004390.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000677011.1CTSH-2332169259aaENSP00000504778.1
 
Protein coding
-A0A7I2YQX6 -GENCODE basic
ENST00000677936.1CTSH-2482127311aaENSP00000502988.1
 
Protein coding
-A0A7I2V2L7 -GENCODE basic
ENST00000677810.1CTSH-2452019293aaENSP00000503585.1
 
Protein coding
-A0A7I2V3T9 -GENCODE basic
ENST00000677534.1CTSH-2431760446aaENSP00000503261.1
 
Protein coding
-A0A7I2V3E8 -GENCODE basic
ENST00000678644.1CTSH-2571601259aaENSP00000503269.1
 
Protein coding
-A0A7I2YQX6 -GENCODE basic
ENST00000677316.1CTSH-2391540297aaENSP00000504051.1
 
Protein coding
-E9PKT6 -GENCODE basic
ENST00000676880.1CTSH-2321513367aaENSP00000504341.1
 
Protein coding
-A0A7I2V4X5 -GENCODE basic
ENST00000528741.6CTSH-2071341297aaENSP00000435329.2
 
Protein coding
-E9PKT6 -GENCODE basicTSL:5
ENST00000677207.1CTSH-2361339251aaENSP00000504828.1
 
Protein coding
-A0A7I2V673 -GENCODE basic
ENST00000615999.5CTSH-2181286358aaENSP00000483303.2
 
Protein coding
-A0A087X0D5 -GENCODE basicTSL:1
ENST00000677789.1CTSH-2441198306aaENSP00000503073.1
 
Protein coding
-A0A7I2YQ92 -GENCODE basic
ENST00000676850.1CTSH-2301136345aaENSP00000503646.1
 
Non stop decay
-A0A7I2YQH4 --
ENST00000679211.1CTSH-268695441aaENSP00000503750.1
 
Nonsense mediated decay
-E9PN84 --
ENST00000676510.1CTSH-2214540341aaENSP00000504686.1
 
Nonsense mediated decay
-A0A7I2V532 --
ENST00000678799.1CTSH-259402941aaENSP00000503899.1
 
Nonsense mediated decay
-E9PN84 --
ENST00000676639.1CTSH-2243392341aaENSP00000504319.1
 
Nonsense mediated decay
-A0A7I2V532 --
ENST00000677320.1CTSH-240251141aaENSP00000504445.1
 
Nonsense mediated decay
-E9PN84 --
ENST00000679017.1CTSH-2642434260aaENSP00000503247.1
 
Nonsense mediated decay
-A0A7I2V314 --
ENST00000679334.1CTSH-2692194240aaENSP00000503722.1
 
Nonsense mediated decay
-A0A7I2V439 --
ENST00000676763.1CTSH-228217385aaENSP00000503917.1
 
Nonsense mediated decay
-A0A7I2YQL1 --
ENST00000533777.5CTSH-213210162aaENSP00000431879.1
 
Nonsense mediated decay
-A0A0B4J217 -TSL:1
ENST00000678727.1CTSH-2582063200aaENSP00000503995.1
 
Nonsense mediated decay
-A0A7I2YQL6 --
ENST00000679047.1CTSH-2651987170aaENSP00000503846.1
 
Nonsense mediated decay
-A0A7I2YQE6 --
ENST00000677921.1CTSH-247194241aaENSP00000503406.1
 
Nonsense mediated decay
-E9PN84 --
ENST00000678886.1CTSH-262188141aaENSP00000503640.1
 
Nonsense mediated decay
-E9PN84 --
ENST00000678283.1CTSH-2531717238aaENSP00000503908.1
 
Nonsense mediated decay
-A0A7I2V2E4 --
ENST00000676596.1CTSH-2231611238aaENSP00000502871.1
 
Nonsense mediated decay
-A0A7I2V2E4 --
ENST00000678031.1CTSH-2491607170aaENSP00000503477.1
 
Nonsense mediated decay
-A0A7I2YQE6 --
ENST00000649928.2CTSH-2191576169aaENSP00000496858.2
 
Nonsense mediated decay
-A0A3B3IRM7 --
ENST00000677874.1CTSH-246156438aaENSP00000504459.1
 
Nonsense mediated decay
-E9PN60 --
ENST00000678281.1CTSH-2521560138aaENSP00000503860.1
 
Nonsense mediated decay
-A0A7I2V4H2 --
ENST00000679172.1CTSH-267152462aaENSP00000503819.1
 
Nonsense mediated decay
-A0A0B4J217 --
ENST00000678487.1CTSH-256150643aaENSP00000504239.1
 
Nonsense mediated decay
-A0A7I2V4W0 --
ENST00000676808.1CTSH-229150348aaENSP00000504472.1
 
Nonsense mediated decay
-A0A7I2V563 --
ENST00000678415.1CTSH-255148749aaENSP00000504210.1
 
Nonsense mediated decay
-A0A7I2V4N9 --
ENST00000528191.6CTSH-205145886aaENSP00000503084.1
 
Nonsense mediated decay
-A0A7I2V2T8 -TSL:4
ENST00000525807.6CTSH-202138638aaENSP00000432935.2
 
Nonsense mediated decay
-E9PN60 -TSL:5
ENST00000529861.6CTSH-210118541aaENSP00000432893.1
 
Nonsense mediated decay
-E9PN84 -TSL:3
ENST00000677367.1CTSH-2411889No protein-
 
Processed transcript
----
ENST00000534533.6CTSH-2171526No protein-
 
Processed transcript
---TSL:3
ENST00000529612.6CTSH-2097215No protein-
 
Retained intron
---TSL:4
ENST00000678841.1CTSH-2617061No protein-
 
Retained intron
----
ENST00000678940.1CTSH-2636655No protein-
 
Retained intron
----
ENST00000527138.6CTSH-2035163No protein-
 
Retained intron
---TSL:4
ENST00000530010.6CTSH-2114798No protein-
 
Retained intron
---TSL:2
ENST00000678114.1CTSH-2514445No protein-
 
Retained intron
----
ENST00000677254.1CTSH-2384424No protein-
 
Retained intron
----
ENST00000678397.1CTSH-2544142No protein-
 
Retained intron
----
ENST00000676486.1CTSH-2204132No protein-
 
Retained intron
----
ENST00000677049.1CTSH-2344076No protein-
 
Retained intron
----
ENST00000677238.1CTSH-2373940No protein-
 
Retained intron
----
ENST00000527715.6CTSH-2043693No protein-
 
Retained intron
---TSL:1
ENST00000678817.1CTSH-2603413No protein-
 
Retained intron
----
ENST00000676668.1CTSH-2253218No protein-
 
Retained intron
----
ENST00000676671.1CTSH-2262445No protein-
 
Retained intron
----
ENST00000534237.6CTSH-2152100No protein-
 
Retained intron
---TSL:3
ENST00000676865.1CTSH-2311903No protein-
 
Retained intron
----
ENST00000676588.1CTSH-2221850No protein-
 
Retained intron
----
ENST00000679125.1CTSH-2661797No protein-
 
Retained intron
----
ENST00000677448.1CTSH-2421783No protein-
 
Retained intron
----
ENST00000677102.1CTSH-2351686No protein-
 
Retained intron
----
ENST00000678033.1CTSH-2501621No protein-
 
Retained intron
----
ENST00000534268.6CTSH-2161444No protein-
 
Retained intron
---TSL:5
ENST00000676738.1CTSH-2271157No protein-
 
Retained intron
----
ENST00000534038.6CTSH-214871No protein-
 
Retained intron
---TSL:4
ENST00000529263.7CTSH-208865No protein-
 
Retained intron
---TSL:5
ENST00000528436.2CTSH-206572No protein-
 
Retained intron
---TSL:3
ENST00000530929.5CTSH-212479No protein-
 
Retained intron
---TSL:3
Description

small nucleolar RNA host gene 17 [Source:HGNC Symbol;Acc:HGNC:48600]

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000449469.5SNHG17-2072138No protein-
 
Retained intron
--TSL:2
ENST00000414142.5SNHG17-2022102No protein-
 
Retained intron
--TSL:2
ENST00000424235.1SNHG17-205764No protein-
 
Retained intron
--TSL:2
ENST00000654008.2SNHG17-2151238No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000655692.1SNHG17-2232643No protein-
 
lncRNA
--GENCODE basic
ENST00000668482.2SNHG17-2802360No protein-
 
lncRNA
--GENCODE basic
ENST00000693250.1SNHG17-3072294No protein-
 
lncRNA
---
ENST00000667282.1SNHG17-2742292No protein-
 
lncRNA
---
ENST00000668042.1SNHG17-2782261No protein-
 
lncRNA
---
ENST00000654389.1SNHG17-2182246No protein-
 
lncRNA
---
ENST00000691386.1SNHG17-3042155No protein-
 
lncRNA
---
ENST00000657868.1SNHG17-2302120No protein-
 
lncRNA
--GENCODE basic
ENST00000669405.1SNHG17-2842119No protein-
 
lncRNA
---
ENST00000664626.1SNHG17-2582103No protein-
 
lncRNA
--GENCODE basic
ENST00000686814.1SNHG17-2912102No protein-
 
lncRNA
--GENCODE basic
ENST00000654853.1SNHG17-2192079No protein-
 
lncRNA
---
ENST00000658455.1SNHG17-2352067No protein-
 
lncRNA
--GENCODE basic
ENST00000659400.1SNHG17-2412047No protein-
 
lncRNA
---
ENST00000656023.1SNHG17-2242023No protein-
 
lncRNA
---
ENST00000658076.1SNHG17-2322010No protein-
 
lncRNA
--GENCODE basic
ENST00000658051.1SNHG17-2311979No protein-
 
lncRNA
---
ENST00000660189.1SNHG17-2441977No protein-
 
lncRNA
--GENCODE basic
ENST00000659102.1SNHG17-2381884No protein-
 
lncRNA
---
ENST00000658141.1SNHG17-2331882No protein-
 
lncRNA
---
ENST00000666225.1SNHG17-2671798No protein-
 
lncRNA
---
ENST00000662982.2SNHG17-2511728No protein-
 
lncRNA
---
ENST00000666806.1SNHG17-2721692No protein-
 
lncRNA
---
ENST00000659753.1SNHG17-2421691No protein-
 
lncRNA
---
ENST00000657429.1SNHG17-2271660No protein-
 
lncRNA
---
ENST00000659186.1SNHG17-2391582No protein-
 
lncRNA
---
ENST00000665693.1SNHG17-2651507No protein-
 
lncRNA
---
ENST00000693665.1SNHG17-3081474No protein-
 
lncRNA
---
ENST00000660064.1SNHG17-2431444No protein-
 
lncRNA
---
ENST00000671309.1SNHG17-2891432No protein-
 
lncRNA
---
ENST00000661252.1SNHG17-2471364No protein-
 
lncRNA
--GENCODE basic
ENST00000667912.1SNHG17-2771332No protein-
 
lncRNA
---
ENST00000667188.1SNHG17-2731316No protein-
 
lncRNA
---
ENST00000691280.1SNHG17-3011314No protein-
 
lncRNA
---
ENST00000665735.1SNHG17-2661301No protein-
 
lncRNA
---
ENST00000664964.1SNHG17-2601291No protein-
 
lncRNA
---
ENST00000668054.2SNHG17-2791291No protein-
 
lncRNA
---
ENST00000653343.1SNHG17-2111279No protein-
 
lncRNA
---
ENST00000692262.1SNHG17-3051243No protein-
 
lncRNA
--GENCODE basic
ENST00000670958.1SNHG17-2871240No protein-
 
lncRNA
---
ENST00000664636.1SNHG17-2591230No protein-
 
lncRNA
---
ENST00000669033.1SNHG17-2811227No protein-
 
lncRNA
---
ENST00000653697.1SNHG17-2121215No protein-
 
lncRNA
---
ENST00000686145.1SNHG17-2901214No protein-
 
lncRNA
---
ENST00000665003.1SNHG17-2611212No protein-
 
lncRNA
---
ENST00000660885.2SNHG17-2461202No protein-
 
lncRNA
---
ENST00000658324.1SNHG17-2341201No protein-
 
lncRNA
---
ENST00000657843.1SNHG17-2291200No protein-
 
lncRNA
---
ENST00000670051.1SNHG17-2861195No protein-
 
lncRNA
---
ENST00000688133.1SNHG17-2951193No protein-
 
lncRNA
---
ENST00000669114.1SNHG17-2821191No protein-
 
lncRNA
---
ENST00000666268.2SNHG17-2681191No protein-
 
lncRNA
---
ENST00000666331.1SNHG17-2691189No protein-
 
lncRNA
---
ENST00000671249.1SNHG17-2881181No protein-
 
lncRNA
---
ENST00000688336.1SNHG17-2961179No protein-
 
lncRNA
---
ENST00000693227.1SNHG17-3061174No protein-
 
lncRNA
---
ENST00000658905.1SNHG17-2371173No protein-
 
lncRNA
---
ENST00000664073.2SNHG17-2571166No protein-
 
lncRNA
---
ENST00000657665.1SNHG17-2281154No protein-
 
lncRNA
---
ENST00000689917.1SNHG17-2981153No protein-
 
lncRNA
---
ENST00000658488.2SNHG17-2361129No protein-
 
lncRNA
---
ENST00000666419.1SNHG17-2701122No protein-
 
lncRNA
---
ENST00000693684.1SNHG17-3091117No protein-
 
lncRNA
---
ENST00000690361.1SNHG17-2991116No protein-
 
lncRNA
---
ENST00000651115.2SNHG17-2091111No protein-
 
lncRNA
---
ENST00000669137.1SNHG17-2831111No protein-
 
lncRNA
---
ENST00000687532.1SNHG17-2941102No protein-
 
lncRNA
---
ENST00000655311.1SNHG17-2211100No protein-
 
lncRNA
---
ENST00000686971.1SNHG17-2921086No protein-
 
lncRNA
---
ENST00000691314.1SNHG17-3021080No protein-
 
lncRNA
---
ENST00000663955.1SNHG17-2561078No protein-
 
lncRNA
---
ENST00000656320.1SNHG17-2251077No protein-
 
lncRNA
---
ENST00000665181.1SNHG17-2621044No protein-
 
lncRNA
---
ENST00000456953.7SNHG17-2081043No protein-
 
lncRNA
--TSL:3
ENST00000687490.1SNHG17-2931043No protein-
 
lncRNA
---
ENST00000657216.2SNHG17-2261034No protein-
 
lncRNA
---
ENST00000660558.2SNHG17-2451032No protein-
 
lncRNA
---
ENST00000665233.2SNHG17-2631026No protein-
 
lncRNA
---
ENST00000663540.2SNHG17-2541022No protein-
 
lncRNA
---
ENST00000665440.1SNHG17-2641022No protein-
 
lncRNA
---
ENST00000436764.7SNHG17-2061010No protein-
 
lncRNA
--TSL:5
ENST00000662572.1SNHG17-250998No protein-
 
lncRNA
---
ENST00000659255.1SNHG17-240993No protein-
 
lncRNA
---
ENST00000662213.1SNHG17-248991No protein-
 
lncRNA
---
ENST00000663187.1SNHG17-252969No protein-
 
lncRNA
---
ENST00000669480.1SNHG17-285968No protein-
 
lncRNA
---
ENST00000653938.1SNHG17-214960No protein-
 
lncRNA
---
ENST00000667835.1SNHG17-276954No protein-
 
lncRNA
---
ENST00000667412.1SNHG17-275954No protein-
 
lncRNA
---
ENST00000654092.1SNHG17-216953No protein-
 
lncRNA
---
ENST00000417578.7SNHG17-203934No protein-
 
lncRNA
--TSL:2
ENST00000691368.1SNHG17-303934No protein-
 
lncRNA
---
ENST00000689414.1SNHG17-297925No protein-
 
lncRNA
---
ENST00000655520.2SNHG17-222897No protein-
 
lncRNA
---
ENST00000653753.1SNHG17-213888No protein-
 
lncRNA
---
ENST00000662568.1SNHG17-249879No protein-
 
lncRNA
---
ENST00000654183.2SNHG17-217874No protein-
 
lncRNA
---
ENST00000663534.1SNHG17-253864No protein-
 
lncRNA
---
ENST00000663784.1SNHG17-255846No protein-
 
lncRNA
---
ENST00000653277.1SNHG17-210840No protein-
 
lncRNA
---
ENST00000690441.1SNHG17-300729No protein-
 
lncRNA
---
ENST00000655198.1SNHG17-220681No protein-
 
lncRNA
---
ENST00000423536.6SNHG17-204674No protein-
 
lncRNA
--TSL:2
ENST00000413755.5SNHG17-201648No protein-
 
lncRNA
--TSL:3
ENST00000666549.1SNHG17-271443No protein-
 
lncRNA
---
Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,507 bps,

Version

ENST00000665693.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x27ff9240)