Human (GRCh38.p14)
Description

patched 1 [Source:HGNC Symbol;Acc:HGNC:9585]

Gene Synonyms

BCNS, NBCCS, PTCH

Location
About this transcript

This transcript has 24 exons, is associated with 37668 variant alleles and maps to 1038 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000331920.11PTCH1-20186621447aaENSP00000332353.6
 
Protein coding
CCDS6714Q13635-1 NM_000264.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
ENST00000430669.6PTCH1-20582321381aaENSP00000410287.2
 
Protein coding
CCDS47996Q13635-3 -GENCODE basicAPPRIS P4TSL:5
ENST00000711046.1PTCH1-22980591381aaENSP00000518556.1
 
Protein coding
CCDS47996--GENCODE basicAPPRIS P4
ENST00000437951.6PTCH1-20679051446aaENSP00000389744.2
 
Protein coding
CCDS47995Q13635-2 NM_001083603.3MANE Plus ClinicalGENCODE basicTSL:5
ENST00000692981.1PTCH1-22770001296aaENSP00000510238.1
 
Protein coding
CCDS43851Q13635-4 -GENCODE basic
ENST00000429896.6PTCH1-20465631296aaENSP00000414823.2
 
Protein coding
CCDS43851Q13635-4 -GENCODE basicTSL:1
ENST00000468211.6PTCH1-2071254183aaENSP00000449745.1
 
Protein coding
CCDS87661A0A0C4DGJ5 -GENCODE basicTSL:1
ENST00000375271.4PTCH1-2021058352aaENSP00000364420.4
 
Protein coding
H0Y3B8 -TSL:1CDS 5' and 3' incomplete
ENST00000553011.5PTCH1-2231037174aaENSP00000447797.1
 
Protein coding
A0A0C4DGI4 -TSL:1CDS 3' incomplete
ENST00000547672.5PTCH1-212881174aaENSP00000447878.1
 
Protein coding
A0A0C4DGI4 -TSL:1CDS 3' incomplete
ENST00000546820.5PTCH1-210864174aaENSP00000448843.1
 
Protein coding
A0A0C4DGI4 -TSL:1CDS 3' incomplete
ENST00000551845.5PTCH1-222809174aaENSP00000447008.1
 
Protein coding
A0A0C4DGI4 -TSL:5CDS 3' incomplete
ENST00000548420.1PTCH1-21455366aaENSP00000449078.1
 
Protein coding
F8VXL8 -TSL:5CDS 3' incomplete
ENST00000551630.1PTCH1-22153992aaENSP00000450131.1
 
Protein coding
F8VQS6 -TSL:1CDS 3' incomplete
ENST00000375290.6PTCH1-20310631486aaENSP00000364439.2
 
Nonsense mediated decay
H3BLX7 -TSL:2CDS 5' incomplete
ENST00000690194.1PTCH1-2267135456aaENSP00000509379.1
 
Nonsense mediated decay
A0A8I5KPP5 --
ENST00000550914.6PTCH1-21863079aaENSP00000450047.1
 
Nonsense mediated decay
F8VPA3 -TSL:2
ENST00000551623.1PTCH1-22036616aaENSP00000447242.1
 
Nonsense mediated decay
H0YHK0 -TSL:1CDS 5' incomplete
ENST00000693534.1PTCH1-2284653No protein-
 
Protein coding CDS not defined
---
ENST00000548379.5PTCH1-213548No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000553256.5PTCH1-224537No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000547615.1PTCH1-211525No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000548945.6PTCH1-215243No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000551425.1PTCH1-219241No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000687744.1PTCH1-2255236No protein-
 
Retained intron
---
ENST00000546744.5PTCH1-2094389No protein-
 
Retained intron
--TSL:2
ENST00000550136.1PTCH1-2172388No protein-
 
Retained intron
--TSL:2
ENST00000549678.1PTCH1-216578No protein-
 
Retained intron
--TSL:4
ENST00000488809.2PTCH1-208301No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 24, Coding exons: 11, Transcript length: 7,135 bps, Translation length: 456 residues

Version

ENST00000690194.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]