Human (GRCh38.p14)
Description

patched 1 [Source:HGNC Symbol;Acc:HGNC:9585]

Gene Synonyms

BCNS, NBCCS, PTCH

Location
About this transcript

This transcript has 7 exons, is annotated with 2 domains and features, is associated with 15580 variant alleles and maps to 322 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000331920.11PTCH1-20186621447aaENSP00000332353.6
 
Protein coding
CCDS6714Q13635-1 NM_000264.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
ENST00000430669.6PTCH1-20582321381aaENSP00000410287.2
 
Protein coding
CCDS47996Q13635-3 -GENCODE basicAPPRIS P4TSL:5
ENST00000711046.1PTCH1-22980591381aaENSP00000518556.1
 
Protein coding
CCDS47996--GENCODE basicAPPRIS P4
ENST00000437951.6PTCH1-20679051446aaENSP00000389744.2
 
Protein coding
CCDS47995Q13635-2 NM_001083603.3MANE Plus ClinicalGENCODE basicTSL:5
ENST00000692981.1PTCH1-22770001296aaENSP00000510238.1
 
Protein coding
CCDS43851Q13635-4 -GENCODE basic
ENST00000429896.6PTCH1-20465631296aaENSP00000414823.2
 
Protein coding
CCDS43851Q13635-4 -GENCODE basicTSL:1
ENST00000468211.6PTCH1-2071254183aaENSP00000449745.1
 
Protein coding
CCDS87661A0A0C4DGJ5 -GENCODE basicTSL:1
ENST00000375271.4PTCH1-2021058352aaENSP00000364420.4
 
Protein coding
H0Y3B8 -TSL:1CDS 5' and 3' incomplete
ENST00000553011.5PTCH1-2231037174aaENSP00000447797.1
 
Protein coding
A0A0C4DGI4 -TSL:1CDS 3' incomplete
ENST00000547672.5PTCH1-212881174aaENSP00000447878.1
 
Protein coding
A0A0C4DGI4 -TSL:1CDS 3' incomplete
ENST00000546820.5PTCH1-210864174aaENSP00000448843.1
 
Protein coding
A0A0C4DGI4 -TSL:1CDS 3' incomplete
ENST00000551845.5PTCH1-222809174aaENSP00000447008.1
 
Protein coding
A0A0C4DGI4 -TSL:5CDS 3' incomplete
ENST00000548420.1PTCH1-21455366aaENSP00000449078.1
 
Protein coding
F8VXL8 -TSL:5CDS 3' incomplete
ENST00000551630.1PTCH1-22153992aaENSP00000450131.1
 
Protein coding
F8VQS6 -TSL:1CDS 3' incomplete
ENST00000375290.6PTCH1-20310631486aaENSP00000364439.2
 
Nonsense mediated decay
H3BLX7 -TSL:2CDS 5' incomplete
ENST00000690194.1PTCH1-2267135456aaENSP00000509379.1
 
Nonsense mediated decay
A0A8I5KPP5 --
ENST00000550914.6PTCH1-21863079aaENSP00000450047.1
 
Nonsense mediated decay
F8VPA3 -TSL:2
ENST00000551623.1PTCH1-22036616aaENSP00000447242.1
 
Nonsense mediated decay
H0YHK0 -TSL:1CDS 5' incomplete
ENST00000693534.1PTCH1-2284653No protein-
 
Protein coding CDS not defined
---
ENST00000548379.5PTCH1-213548No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000553256.5PTCH1-224537No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000547615.1PTCH1-211525No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000548945.6PTCH1-215243No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000551425.1PTCH1-219241No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000687744.1PTCH1-2255236No protein-
 
Retained intron
---
ENST00000546744.5PTCH1-2094389No protein-
 
Retained intron
--TSL:2
ENST00000550136.1PTCH1-2172388No protein-
 
Retained intron
--TSL:2
ENST00000549678.1PTCH1-216578No protein-
 
Retained intron
--TSL:4
ENST00000488809.2PTCH1-208301No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 7, Coding exons: 5, Transcript length: 881 bps, Translation length: 174 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

CDS 3' incomplete

Version

ENST00000547672.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.