Human (GRCh38.p14)
Description

sodium voltage-gated channel alpha subunit 5 [Source:HGNC Symbol;Acc:HGNC:10593]

Gene Synonyms

CDCD2, CMD1E, CMPD2, HB1, HB2, HBBD, HH1, ICCD, IVF, LQT3, NAV1.5, PFHB1, SSS1

Location
About this transcript

This transcript has 28 exons, is annotated with 73 domains and features, is associated with 46061 variant alleles and maps to 864 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000423572.7SCN5A-20585162015aaENSP00000398266.2
 
Protein coding
CCDS46797Q14524-2 NM_000335.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000333535.9SCN5A-20285192016aaENSP00000328968.4
 
Protein coding
CCDS46796Q14524-1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000413689.6SCN5A-20385192016aaENSP00000410257.1
 
Protein coding
CCDS46799H9KVD2 NM_001099404.2MANE Plus ClinicalGENCODE basicAPPRIS P4TSL:5
ENST00000327956.7SCN5A-20184452015aaENSP00000333674.7
 
Protein coding
CCDS46797A3EY21 -APPRIS ALT1TSL:1
ENST00000414099.6SCN5A-20483031998aaENSP00000398962.2
 
Protein coding
CCDS46798E9PG18 -GENCODE basicTSL:1
ENST00000455624.6SCN5A-20871701983aaENSP00000399524.2
 
Protein coding
CCDS54570E9PHB6 -GENCODE basicTSL:1
ENST00000450102.6SCN5A-20762841962aaENSP00000403355.2
 
Protein coding
CCDS54569K4DIA1 -GENCODE basicTSL:1
ENST00000449557.6SCN5A-20658981962aaENSP00000413996.2
 
Protein coding
A0A0A0MT39 -GENCODE basicTSL:5
ENST00000464652.1SCN5A-209591No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000491944.1SCN5A-2111382No protein-
 
Retained intron
--TSL:1
ENST00000476683.1SCN5A-210774No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 28, Coding exons: 27, Transcript length: 8,519 bps, Translation length: 2,016 residues

MANE

This MANE Plus Clinical transcript contains ENSP00000410257 and matches to NM_001099404.2 and NP_001092874.1

CCDS

This transcript is a member of the Human CCDS set: CCDS46799

Transcript Support Level (TSL)

TSL:5

Version

ENST00000413689.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.