Human (GRCh38.p14)
Description

SATB homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10541]

Location
About this transcript

This transcript has 11 exons, is annotated with 45 domains and features, is associated with 41246 variant alleles and maps to 434 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000338745.11SATB1-2017822763aaENSP00000341024.5
 
Protein coding
CCDS2631Q01826-1 NM_002971.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000417717.6SATB1-2044589795aaENSP00000399518.1
 
Protein coding
CCDS56242Q01826-2 -GENCODE basicTSL:1
ENST00000454909.6SATB1-2093755763aaENSP00000399708.2
 
Protein coding
CCDS2631Q01826-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000700177.1SATB1-2193280763aaENSP00000514845.1
 
Protein coding
CCDS2631Q01826-1 -APPRIS P1
ENST00000700179.1SATB1-2213255763aaENSP00000514847.1
 
Protein coding
CCDS2631Q01826-1 -GENCODE basicAPPRIS P1
ENST00000700178.1SATB1-2203115763aaENSP00000514846.1
 
Protein coding
CCDS2631Q01826-1 -APPRIS P1
ENST00000700180.1SATB1-2222973763aaENSP00000514848.1
 
Protein coding
CCDS2631Q01826-1 -GENCODE basicAPPRIS P1
ENST00000415069.6SATB1-2032702763aaENSP00000390529.2
 
Protein coding
CCDS2631Q01826-1 -GENCODE basicAPPRIS P1TSL:3
ENST00000457005.6SATB1-2102467763aaENSP00000398072.2
 
Protein coding
CCDS2631Q01826-1 -GENCODE basicAPPRIS P1TSL:4
ENST00000440737.5SATB1-205975224aaENSP00000402982.1
 
Protein coding
C9JP21 -TSL:5CDS 3' incomplete
ENST00000452260.6SATB1-208939172aaENSP00000406727.2
 
Protein coding
C9IZC5 -TSL:4CDS 3' incomplete
ENST00000493952.2SATB1-21762682aaENSP00000453908.1
 
Protein coding
H0YN86 -GENCODE basicTSL:3
ENST00000414509.5SATB1-202583116aaENSP00000408871.1
 
Protein coding
C9JLL5 -TSL:3CDS 3' incomplete
ENST00000444341.1SATB1-20657970aaENSP00000391344.1
 
Protein coding
C9J3I0 -TSL:4CDS 3' incomplete
ENST00000450898.1SATB1-2074648aaENSP00000394520.1
 
Protein coding
A0A1D5RMP0 -TSL:4CDS 3' incomplete
ENST00000700181.1SATB1-2231739No protein-
 
Protein coding CDS not defined
---
ENST00000475083.5SATB1-212558No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000606296.1SATB1-2184200No protein-
 
Retained intron
--TSL:NA
ENST00000491519.4SATB1-2161000No protein-
 
Retained intron
--TSL:2
ENST00000467628.1SATB1-211551No protein-
 
Retained intron
--TSL:3
ENST00000487699.1SATB1-215477No protein-
 
Retained intron
--TSL:4
ENST00000482788.1SATB1-214406No protein-
 
Retained intron
--TSL:3
ENST00000476178.1SATB1-213361No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,702 bps, Translation length: 763 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01826

CCDS

This transcript is a member of the Human CCDS set: CCDS2631

Transcript Support Level (TSL)

TSL:3

Version

ENST00000415069.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.