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Description

BAF chromatin remodeling complex subunit BCL11A [Source:HGNC Symbol;Acc:HGNC:13221]

Gene Synonyms

BCL11A-L, BCL11A-S, BCL11A-XL, CTIP1, EVI9, HBFQTL5, ZNF856

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
BCL11A-213ENST00000642384.26102835aaENSP00000496168.1
 
Protein coding
CCDS1862Q9H165-1 NM_022893.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4
BCL11A-202ENST00000356842.94052773aaENSP00000349300.4
 
Protein coding
CCDS1861Q9H165-2 -GENCODE basicTSL:1
BCL11A-203ENST00000358510.62664793aaENSP00000351307.5
 
Protein coding
CCDS86845A0A2U3TZJ5 -GENCODE basicTSL:1
BCL11A-204ENST00000359629.102494243aaENSP00000352648.5
 
Protein coding
CCDS46295Q9H165-3 -GENCODE basicTSL:1
BCL11A-212ENST00000642180.16003161aaENSP00000493887.1
 
Protein coding
-A0A2R8YCR5 -CDS 5' incomplete
BCL11A-201ENST00000335712.115519801aaENSP00000338774.7
 
Protein coding
-Q9H165-6 -GENCODE basicAPPRIS ALT1TSL:1
BCL11A-219ENST00000643716.14874130aaENSP00000494397.1
 
Protein coding
-A0A2R8YEK1 -GENCODE basic
BCL11A-224ENST00000646249.13388209aaENSP00000495759.1
 
Protein coding
-A0A2R8Y2E8 -GENCODE basic
BCL11A-209ENST00000489516.71519241aaENSP00000488390.2
 
Protein coding
-A0A0J9YXG2 -GENCODE basicTSL:5
BCL11A-216ENST00000643004.11379130aaENSP00000496736.1
 
Protein coding
-A0A2R8YHH4 -GENCODE basic
BCL11A-214ENST00000642439.11325209aaENSP00000493484.1
 
Protein coding
-A0A2R8Y2E8 -GENCODE basic
BCL11A-218ENST00000643459.1993331aaENSP00000494996.1
 
Protein coding
-A0A2R8YDW6 -CDS 5' and 3' incomplete
BCL11A-217ENST00000643222.1866204aaENSP00000495862.1
 
Protein coding
-A0A2R8Y7B0 -CDS 5' incomplete
BCL11A-205ENST00000409351.5758142aaENSP00000487844.1
 
Protein coding
-Q9H165-8 -GENCODE basicTSL:1
BCL11A-207ENST00000479026.256417aaENSP00000488636.1
 
Protein coding
-A0A0J9YY13 -TSL:4CDS 5' incomplete
BCL11A-208ENST00000489183.137294aaENSP00000494014.1
 
Protein coding
-A0A2R8YDS7 -TSL:3CDS 5' incomplete
BCL11A-226ENST00000647469.136997aaENSP00000496304.1
 
Protein coding
-A0A2R8YGT9 -CDS 5' incomplete
BCL11A-211ENST00000631857.12316167aaENSP00000488886.1
 
Nonsense mediated decay
-A0A0J9YYJ9 -TSL:2
BCL11A-227ENST00000647472.11329102aaENSP00000496588.1
 
Nonsense mediated decay
-A0A2R8Y7W4 -CDS 5' incomplete
BCL11A-206ENST00000477659.12775No protein-
 
Processed transcript
---TSL:2
BCL11A-215ENST00000642824.1726No protein-
 
Processed transcript
----
BCL11A-222ENST00000645405.1634No protein-
 
Processed transcript
----
BCL11A-210ENST00000492272.6619No protein-
 
Processed transcript
---TSL:2
BCL11A-225ENST00000647038.1522No protein-
 
Processed transcript
----
BCL11A-221ENST00000645224.13727No protein-
 
Retained intron
----
BCL11A-223ENST00000645455.1819No protein-
 
Retained intron
----
BCL11A-220ENST00000644606.1518No protein-
 
Retained intron
----
Description

synaptophysin like 1 [Source:HGNC Symbol;Acc:HGNC:11507]

Gene Synonyms

SYPL

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SYPL1-202ENST00000455385.72130241aaENSP00000388336.2
 
Protein coding
CCDS47685Q16563-2 NM_182715.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
SYPL1-201ENST00000011473.62127259aaENSP00000011473.2
 
Protein coding
CCDS5736Q16563-1 -GENCODE basicAPPRIS P4TSL:1
SYPL1-205ENST00000470347.11193224aaENSP00000419070.1
 
Protein coding
-C9JYN0 -GENCODE basicTSL:3
SYPL1-204ENST00000464029.51017148aaENSP00000417473.1
 
Protein coding
-H7C4J8 -TSL:2CDS 5' incomplete
SYPL1-207ENST00000634737.1835135aaENSP00000489167.1
 
Nonsense mediated decay
-A0A0U1RQT9 -TSL:5CDS 5' incomplete
SYPL1-203ENST00000460770.1545No protein-
 
Retained intron
---TSL:1
SYPL1-206ENST00000483448.1478No protein-
 
Retained intron
---TSL:4
Description

calcium voltage-gated channel auxiliary subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:1404]

Gene Synonyms

EJM4

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CACNB4-210ENST00000539935.77944520aaENSP00000438949.1
 
Protein coding
CCDS46426O00305-1 NM_000726.5MANE Select v0.93Ensembl CanonicalGENCODE basicTSL:1
CACNB4-243ENST00000637217.18188473aaENSP00000490250.1
 
Protein coding
CCDS82522H0Y476 -GENCODE basicTSL:5
CACNB4-228ENST00000636598.17808473aaENSP00000490247.1
 
Protein coding
CCDS82522H0Y476 -GENCODE basicTSL:5
CACNB4-269ENST00000638005.14615502aaENSP00000489677.1
 
Protein coding
CCDS46427O00305-3 -GENCODE basicTSL:2
CACNB4-245ENST00000637284.12423334aaENSP00000489787.1
 
Protein coding
CCDS82520A0A1B0GTP5 -GENCODE basicTSL:5
CACNB4-209ENST00000534999.62369486aaENSP00000443893.1
 
Protein coding
CCDS46428O00305-2 -GENCODE basicAPPRIS P1TSL:1
CACNB4-206ENST00000439467.62159473aaENSP00000390161.2
 
Protein coding
CCDS82522H0Y476 -GENCODE basicTSL:5
CACNB4-270ENST00000638040.12026410aaENSP00000489883.1
 
Protein coding
CCDS82521A0A1B0GTX8 -GENCODE basicTSL:5
CACNB4-254ENST00000637514.11880334aaENSP00000490304.1
 
Protein coding
CCDS82520A0A1B0GTP5 -GENCODE basicTSL:5
CACNB4-263ENST00000637779.11772423aaENSP00000489732.1
 
Protein coding
CCDS82523A0A1B0GTK1 -GENCODE basicTSL:5
CACNB4-201ENST00000201943.101389458aaENSP00000201943.5
 
Protein coding
CCDS54409O00305-4 -GENCODE basicTSL:1
CACNB4-221ENST00000636130.17748411aaENSP00000490607.1
 
Protein coding
-A0A1B0GTS4 -GENCODE basicTSL:5
CACNB4-238ENST00000636901.17706392aaENSP00000490145.1
 
Protein coding
-A0A1B0GUK4 -GENCODE basicTSL:5
CACNB4-257ENST00000637547.17658307aaENSP00000490124.1
 
Protein coding
-A0A1B0GUI5 -GENCODE basicTSL:5
CACNB4-222ENST00000636350.17654452aaENSP00000489621.1
 
Protein coding
-A0A1B0GTA9 -GENCODE basicTSL:5
CACNB4-246ENST00000637309.17409256aaENSP00000490127.1
 
Protein coding
-A0A1B0GUI8 -GENCODE basicTSL:5
CACNB4-229ENST00000636617.15757407aaENSP00000490660.1
 
Protein coding
-A0A1B0GVU5 -GENCODE basicTSL:5
CACNB4-239ENST00000636947.15575307aaENSP00000490337.1
 
Protein coding
-A0A1B0GV16 -GENCODE basicTSL:1
CACNB4-225ENST00000636442.14232461aaENSP00000489779.1
 
Protein coding
-A0A1B0GTN8 -GENCODE basicTSL:5
CACNB4-233ENST00000636773.14143411aaENSP00000489818.1
 
Protein coding
-A0A1B0GTS4 -GENCODE basicTSL:5
CACNB4-273ENST00000638091.14061424aaENSP00000489967.1
 
Protein coding
-A0A1B0GU53 -GENCODE basicTSL:5
CACNB4-260ENST00000637762.13800490aaENSP00000489876.1
 
Protein coding
-A0A1B0GTX2 -GENCODE basicTSL:5
CACNB4-234ENST00000636785.13787363aaENSP00000489788.1
 
Protein coding
-A0A1B0GTP6 -GENCODE basicTSL:5
CACNB4-216ENST00000635890.13567113aaENSP00000489915.1
 
Protein coding
-A0A1B0GU07 -TSL:5CDS 5' incomplete
CACNB4-220ENST00000636129.12283323aaENSP00000489912.1
 
Protein coding
-A0A1B0GU05 -GENCODE basicTSL:5
CACNB4-203ENST00000397327.72112441aaENSP00000380490.3
 
Protein coding
-E7EN11 -GENCODE basicTSL:5
CACNB4-250ENST00000637418.12015445aaENSP00000489679.1
 
Protein coding
-A0A1B0GTF6 -GENCODE basicTSL:5
CACNB4-202ENST00000360283.111885472aaENSP00000353425.8
 
Protein coding
-A0A1B0GXG0 -GENCODE basicTSL:5
CACNB4-204ENST00000427385.61776479aaENSP00000410978.2
 
Protein coding
-A0A1C7CYX2 -GENCODE basicTSL:5
CACNB4-223ENST00000636380.11756351aaENSP00000490488.1
 
Protein coding
-A0A1B0GVF0 -GENCODE basicTSL:5
CACNB4-219ENST00000636108.11698334aaENSP00000490176.1
 
Protein coding
-A0A1B0GUM9 -GENCODE basicTSL:5
CACNB4-231ENST00000636721.11542272aaENSP00000490795.1
 
Protein coding
-A0A1B0GW63 -GENCODE basicTSL:5
CACNB4-242ENST00000637216.11292341aaENSP00000490910.1
 
Protein coding
-A0A1B0GWF9 -TSL:5CDS 3' incomplete
CACNB4-205ENST00000434468.2720125aaENSP00000399242.2
 
Protein coding
-C9J224 -TSL:5CDS 3' incomplete
CACNB4-271ENST00000638056.1605124aaENSP00000490787.1
 
Protein coding
-A0A1B0GW58 -TSL:5CDS 5' incomplete
CACNB4-226ENST00000636496.143040aaENSP00000490249.1
 
Protein coding
-A0A1B0GUU5 -TSL:5CDS 3' incomplete
CACNB4-212ENST00000635738.17854180aaENSP00000489881.1
 
Nonsense mediated decay
-A0A1B0GTX6 -TSL:5
CACNB4-227ENST00000636507.14688194aaENSP00000490252.1
 
Nonsense mediated decay
-A0A1B0GUU8 -TSL:5
CACNB4-218ENST00000635930.1448480aaENSP00000489953.1
 
Nonsense mediated decay
-A0A1B0GU42 -TSL:5
CACNB4-244ENST00000637232.14024145aaENSP00000490138.1
 
Nonsense mediated decay
-A0A1B0GUJ7 -TSL:5
CACNB4-241ENST00000637132.13877219aaENSP00000490651.1
 
Nonsense mediated decay
-A0A1B0GVT6 -TSL:5
CACNB4-251ENST00000637436.1352048aaENSP00000489746.1
 
Nonsense mediated decay
-A0A1B0GTL1 -TSL:5
CACNB4-247ENST00000637312.13485202aaENSP00000490144.1
 
Nonsense mediated decay
-A0A1B0GUK3 -TSL:5
CACNB4-232ENST00000636762.13191194aaENSP00000490918.1
 
Nonsense mediated decay
-A0A1B0GWG5 -TSL:5
CACNB4-258ENST00000637550.13038158aaENSP00000489943.1
 
Nonsense mediated decay
-A0A1B0GU32 -TSL:5
CACNB4-217ENST00000635904.12444215aaENSP00000490430.1
 
Nonsense mediated decay
-A0A1B0GUW8 -TSL:5
CACNB4-249ENST00000637330.1210238aaENSP00000490817.1
 
Nonsense mediated decay
-A0A1B0GW81 -TSL:5
CACNB4-264ENST00000637828.11831393aaENSP00000490443.1
 
Nonsense mediated decay
-A0A1B0GVB2 -TSL:5
CACNB4-253ENST00000637491.11751207aaENSP00000490510.1
 
Nonsense mediated decay
-E7DBM8 -TSL:5
CACNB4-256ENST00000637535.11731232aaENSP00000490891.1
 
Nonsense mediated decay
-A0A1B0GTH0 -TSL:5
CACNB4-230ENST00000636664.11698232aaENSP00000490572.1
 
Nonsense mediated decay
-A0A1B0GTH0 -TSL:5
CACNB4-274ENST00000638150.11646168aaENSP00000490501.1
 
Nonsense mediated decay
-A0A1B0GVG1 -TSL:5
CACNB4-268ENST00000637956.1143080aaENSP00000490298.1
 
Nonsense mediated decay
-A0A1B0GU42 -TSL:5
CACNB4-240ENST00000637007.1858110aaENSP00000489772.1
 
Nonsense mediated decay
-A0A1B0GTN2 -TSL:5CDS 5' incomplete
CACNB4-224ENST00000636390.155879aaENSP00000490603.1
 
Nonsense mediated decay
-A0A1B0GVP7 -TSL:4CDS 5' incomplete
CACNB4-214ENST00000635803.13395No protein-
 
Processed transcript
---TSL:5
CACNB4-266ENST00000637913.12034No protein-
 
Processed transcript
---TSL:5
CACNB4-213ENST00000635743.1745No protein-
 
Processed transcript
---TSL:5
CACNB4-236ENST00000636831.18595No protein-
 
Retained intron
---TSL:5
CACNB4-265ENST00000637884.18233No protein-
 
Retained intron
---TSL:NA
CACNB4-272ENST00000638083.16849No protein-
 
Retained intron
---TSL:NA
CACNB4-259ENST00000637622.15209No protein-
 
Retained intron
---TSL:5
CACNB4-252ENST00000637479.14858No protein-
 
Retained intron
---TSL:5
CACNB4-237ENST00000636834.14589No protein-
 
Retained intron
---TSL:5
CACNB4-211ENST00000635731.14299No protein-
 
Retained intron
---TSL:NA
CACNB4-207ENST00000470066.24036No protein-
 
Retained intron
---TSL:5
CACNB4-267ENST00000637942.14020No protein-
 
Retained intron
---TSL:5
CACNB4-235ENST00000636810.13754No protein-
 
Retained intron
---TSL:5
CACNB4-248ENST00000637319.13549No protein-
 
Retained intron
---TSL:5
CACNB4-262ENST00000637773.13174No protein-
 
Retained intron
---TSL:5
CACNB4-255ENST00000637530.13104No protein-
 
Retained intron
---TSL:5
CACNB4-261ENST00000637765.12955No protein-
 
Retained intron
---TSL:5
CACNB4-215ENST00000635835.11807No protein-
 
Retained intron
---TSL:5
CACNB4-208ENST00000475848.21174No protein-
 
Retained intron
---TSL:NA
Statistics

Exons: 12, Coding exons: 0, Transcript length: 3,754 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000636810.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x245fa780)