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Description

centrosome and spindle pole associated protein 1 [Source:HGNC Symbol;Acc:HGNC:26193]

Gene Synonyms

CSPP, CSPP-L, FLJ22490, JBTS21

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CSPP1-261ENST00000678616.148591226aaENSP00000504733.1
 
Protein coding
--NM_001382391.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2
CSPP1-216ENST00000676317.148821221aaENSP00000502047.1
 
Protein coding
CCDS43744--GENCODE basicAPPRIS ALT2
CSPP1-203ENST00000519668.13715876aaENSP00000430092.1
 
Protein coding
CCDS78344Q1MSJ5-2 -GENCODE basicAPPRIS ALT2TSL:1
CSPP1-259ENST00000678542.150111262aaENSP00000503878.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-221ENST00000676605.150111262aaENSP00000503605.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-242ENST00000677592.148641215aaENSP00000504516.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-277ENST00000679226.146531097aaENSP00000503601.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-228ENST00000676882.145921188aaENSP00000504342.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-201ENST00000262210.1144761248aaENSP00000262210.6
 
Protein coding
-Q1MSJ5-1 -GENCODE basicAPPRIS ALT2TSL:1
CSPP1-243ENST00000677619.143991008aaENSP00000504522.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-212ENST00000675869.143481161aaENSP00000502747.1
 
Protein coding
-A0A6Q8PHN8 -GENCODE basicAPPRIS ALT2
CSPP1-268ENST00000678747.143171035aaENSP00000503390.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-210ENST00000675306.242911134aaENSP00000502421.1
 
Protein coding
-A0A6Q8PGS3 -GENCODE basicAPPRIS ALT2
CSPP1-226ENST00000676847.142401219aaENSP00000503336.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-213ENST00000675955.142081199aaENSP00000501676.1
 
Protein coding
-A0A6Q8PF96 -GENCODE basicAPPRIS ALT2
CSPP1-215ENST00000676113.141761212aaENSP00000501645.1
 
Protein coding
-A0A6Q8PF61 -GENCODE basicAPPRIS P4
CSPP1-217ENST00000676471.141211137aaENSP00000503711.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-263ENST00000678645.141211185aaENSP00000504031.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-231ENST00000677009.138441059aaENSP00000503297.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-250ENST00000678017.13828843aaENSP00000504394.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-255ENST00000678318.138221071aaENSP00000503690.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-209ENST00000674993.138021256aaENSP00000502454.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-220ENST00000676573.13634993aaENSP00000504532.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
CSPP1-260ENST00000678553.11934634aaENSP00000503747.1
 
Protein coding
---CDS 3' incomplete
CSPP1-233ENST00000677070.11642547aaENSP00000503014.1
 
Protein coding
---CDS 5' and 3' incomplete
CSPP1-227ENST00000676858.14683669aaENSP00000502925.1
 
Nonsense mediated decay
----
CSPP1-276ENST00000679112.1450666aaENSP00000503739.1
 
Nonsense mediated decay
----
CSPP1-236ENST00000677256.1435192aaENSP00000504102.1
 
Nonsense mediated decay
----
CSPP1-238ENST00000677430.14152773aaENSP00000504177.1
 
Nonsense mediated decay
----
CSPP1-202ENST00000519163.63982404aaENSP00000428694.1
 
Nonsense mediated decay
-F2Z2M5 -TSL:2
CSPP1-247ENST00000677855.13948517aaENSP00000504757.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-240ENST00000677473.13887587aaENSP00000503534.1
 
Nonsense mediated decay
----
CSPP1-246ENST00000677845.13642321aaENSP00000503524.1
 
Nonsense mediated decay
----
CSPP1-229ENST00000676968.12913387aaENSP00000504024.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-249ENST00000677964.12863177aaENSP00000504322.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-272ENST00000678895.12830455aaENSP00000504461.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-225ENST00000676804.12790437aaENSP00000504464.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-257ENST00000678362.12489369aaENSP00000504317.1
 
Nonsense mediated decay
----
CSPP1-223ENST00000676695.12464436aaENSP00000503292.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-211ENST00000675820.1240979aaENSP00000501959.1
 
Nonsense mediated decay
-E5RI67 --
CSPP1-206ENST00000521324.32350290aaENSP00000502264.2
 
Nonsense mediated decay
-A0A6Q8PGI0 -TSL:3CDS 5' incomplete
CSPP1-235ENST00000677131.12334436aaENSP00000503937.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-265ENST00000678723.12329440aaENSP00000503153.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-219ENST00000676567.12140336aaENSP00000503427.1
 
Nonsense mediated decay
----
CSPP1-266ENST00000678728.11991405aaENSP00000504830.1
 
Nonsense mediated decay
----
CSPP1-245ENST00000677836.11565416aaENSP00000504345.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-258ENST00000678444.11511318aaENSP00000503879.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-253ENST00000678204.1143274aaENSP00000504782.1
 
Nonsense mediated decay
----
CSPP1-267ENST00000678744.11169104aaENSP00000503495.1
 
Nonsense mediated decay
----
CSPP1-256ENST00000678345.1830187aaENSP00000503668.1
 
Nonsense mediated decay
---CDS 5' incomplete
CSPP1-207ENST00000521919.656979aaENSP00000429546.2
 
Nonsense mediated decay
-E5RI67 -TSL:4
CSPP1-204ENST00000519701.556966aaENSP00000428793.1
 
Nonsense mediated decay
-E5RGA5 -TSL:4
CSPP1-232ENST00000677052.13844No protein-
 
Processed transcript
----
CSPP1-270ENST00000678821.13199No protein-
 
Processed transcript
----
CSPP1-262ENST00000678635.12745No protein-
 
Processed transcript
----
CSPP1-251ENST00000678138.12587No protein-
 
Processed transcript
----
CSPP1-230ENST00000676980.11564No protein-
 
Processed transcript
----
CSPP1-205ENST00000521168.51457No protein-
 
Processed transcript
---TSL:1
CSPP1-237ENST00000677276.1670No protein-
 
Processed transcript
----
CSPP1-208ENST00000674647.1427No protein-
 
Processed transcript
----
CSPP1-214ENST00000675990.15999No protein-
 
Retained intron
----
CSPP1-218ENST00000676534.15363No protein-
 
Retained intron
----
CSPP1-252ENST00000678156.14302No protein-
 
Retained intron
----
CSPP1-279ENST00000679295.13322No protein-
 
Retained intron
----
CSPP1-278ENST00000679274.13275No protein-
 
Retained intron
----
CSPP1-274ENST00000679042.13258No protein-
 
Retained intron
----
CSPP1-224ENST00000676697.13226No protein-
 
Retained intron
----
CSPP1-248ENST00000677938.13082No protein-
 
Retained intron
----
CSPP1-239ENST00000677455.13022No protein-
 
Retained intron
----
CSPP1-273ENST00000678927.12765No protein-
 
Retained intron
----
CSPP1-280ENST00000679322.12166No protein-
 
Retained intron
----
CSPP1-241ENST00000677538.12063No protein-
 
Retained intron
----
CSPP1-244ENST00000677697.11895No protein-
 
Retained intron
----
CSPP1-222ENST00000676656.11705No protein-
 
Retained intron
----
CSPP1-271ENST00000678834.11450No protein-
 
Retained intron
----
CSPP1-269ENST00000678807.11448No protein-
 
Retained intron
----
CSPP1-254ENST00000678216.11438No protein-
 
Retained intron
----
CSPP1-264ENST00000678685.11198No protein-
 
Retained intron
----
CSPP1-234ENST00000677071.1682No protein-
 
Retained intron
----
CSPP1-275ENST00000679060.1640No protein-
 
Retained intron
----
Description

NDRG family member 4 [Source:HGNC Symbol;Acc:HGNC:14466]

Gene Synonyms

KIAA1180, SMAP-8

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
NDRG4-255ENST00000570248.53207352aaENSP00000457659.1
 
Protein coding
CCDS58466Q9ULP0-1 -Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
NDRG4-204ENST00000394282.83626391aaENSP00000377823.4
 
Protein coding
CCDS45500Q9ULP0-6 -GENCODE basicTSL:1
NDRG4-203ENST00000394279.63431371aaENSP00000377820.2
 
Protein coding
CCDS10797Q9ULP0-3 -GENCODE basicTSL:5
NDRG4-201ENST00000258187.93324371aaENSP00000258187.5
 
Protein coding
CCDS10797Q9ULP0-3 -GENCODE basicTSL:1
NDRG4-236ENST00000566192.53265339aaENSP00000454410.1
 
Protein coding
CCDS58467Q9ULP0-2 -GENCODE basicAPPRIS P4TSL:1
NDRG4-202ENST00000356752.81375369aaENSP00000349193.4
 
Protein coding
CCDS55999Q9ULP0-7 -GENCODE basicTSL:2
NDRG4-254ENST00000569923.51312284aaENSP00000457119.1
 
Protein coding
CCDS86532B7Z9X4 -GENCODE basicTSL:2
NDRG4-247ENST00000568640.51281357aaENSP00000456338.1
 
Protein coding
CCDS58465Q9ULP0-8 -GENCODE basicTSL:2
NDRG4-221ENST00000563799.53014357aaENSP00000458113.1
 
Protein coding
-Q9ULP0-5 -GENCODE basicTSL:2
NDRG4-217ENST00000562999.52931327aaENSP00000455806.1
 
Protein coding
-H3BQJ4 -GENCODE basicTSL:5
NDRG4-231ENST00000565434.5747142aaENSP00000456400.1
 
Protein coding
-H3BRT9 -TSL:4CDS 3' incomplete
NDRG4-223ENST00000564126.5705199aaENSP00000454216.1
 
Protein coding
-H3BM40 -TSL:3CDS 3' incomplete
NDRG4-225ENST00000564486.5697173aaENSP00000455660.1
 
Protein coding
-H3BQ86 -TSL:4CDS 3' incomplete
NDRG4-252ENST00000569539.5618128aaENSP00000457435.1
 
Protein coding
-H3BU25 -TSL:4CDS 3' incomplete
NDRG4-242ENST00000567454.5610153aaENSP00000455054.1
 
Protein coding
-H3BNX9 -TSL:3CDS 3' incomplete
NDRG4-250ENST00000569404.5590157aaENSP00000454893.1
 
Protein coding
-H3BNK4 -TSL:4CDS 3' incomplete
NDRG4-243ENST00000567667.5590149aaENSP00000454509.1
 
Protein coding
-H3BMR6 -TSL:4CDS 3' incomplete
NDRG4-228ENST00000565088.5590143aaENSP00000457413.1
 
Protein coding
-H3BU08 -TSL:3CDS 3' incomplete
NDRG4-211ENST00000561779.5587153aaENSP00000458092.1
 
Protein coding
-H3BVF3 -TSL:4CDS 3' incomplete
NDRG4-208ENST00000561724.5585150aaENSP00000456135.1
 
Protein coding
-H3BR92 -TSL:4CDS 3' incomplete
NDRG4-249ENST00000569026.1583154aaENSP00000455421.1
 
Protein coding
-H3BPQ3 -TSL:4CDS 5' incomplete
NDRG4-239ENST00000566618.5581109aaENSP00000456641.1
 
Protein coding
-H3BSC3 -TSL:4CDS 3' incomplete
NDRG4-214ENST00000562731.557535aaENSP00000456863.1
 
Protein coding
-H3BST8 -TSL:4CDS 3' incomplete
NDRG4-210ENST00000561738.5573191aaENSP00000454811.1
 
Protein coding
-H3BNE7 -TSL:5CDS 5' and 3' incomplete
NDRG4-230ENST00000565430.5566111aaENSP00000455324.1
 
Protein coding
-H3BPH8 -TSL:4CDS 3' incomplete
NDRG4-245ENST00000568424.156419aaENSP00000458032.1
 
Protein coding
-H3BVB0 -TSL:4CDS 3' incomplete
NDRG4-241ENST00000567063.555884aaENSP00000454274.1
 
Protein coding
-H3BM83 -TSL:4CDS 3' incomplete
NDRG4-222ENST00000563978.555883aaENSP00000455541.1
 
Protein coding
-H3BQ01 -TSL:5CDS 3' incomplete
NDRG4-248ENST00000568999.5556156aaENSP00000454745.1
 
Protein coding
-H3BN97 -TSL:4CDS 3' incomplete
NDRG4-224ENST00000564207.5550153aaENSP00000454956.1
 
Protein coding
-H3BNQ1 -TSL:4CDS 3' incomplete
NDRG4-240ENST00000566656.554964aaENSP00000457678.1
 
Protein coding
-H3BUK1 -TSL:4CDS 3' incomplete
NDRG4-233ENST00000566041.554539aaENSP00000454767.1
 
Protein coding
-H3BNB4 -TSL:4CDS 3' incomplete
NDRG4-229ENST00000565304.5533145aaENSP00000454693.1
 
Protein coding
-H3BN53 -TSL:4CDS 3' incomplete
NDRG4-251ENST00000569408.146181aaENSP00000454221.1
 
Protein coding
-H3BM44 -TSL:4CDS 5' incomplete
NDRG4-215ENST00000562764.561040aaENSP00000455465.1
 
Nonsense mediated decay
-H3BPT6 -TSL:4
NDRG4-246ENST00000568464.559963aaENSP00000454372.1
 
Nonsense mediated decay
-H3BMG5 -TSL:4
NDRG4-226ENST00000564867.557945aaENSP00000457638.1
 
Nonsense mediated decay
-H3BUH4 -TSL:4
NDRG4-234ENST00000566061.557465aaENSP00000456583.1
 
Nonsense mediated decay
-H3BS80 -TSL:4
NDRG4-216ENST00000562930.556338aaENSP00000455518.1
 
Nonsense mediated decay
-H3BPY2 -TSL:4
NDRG4-218ENST00000563022.5589No protein-
 
Processed transcript
---TSL:4
NDRG4-253ENST00000569578.5562No protein-
 
Processed transcript
---TSL:4
NDRG4-235ENST00000566065.5497No protein-
 
Processed transcript
---TSL:4
NDRG4-213ENST00000562725.5271No protein-
 
Processed transcript
---TSL:4
NDRG4-205ENST00000421602.65116No protein-
 
Retained intron
---TSL:2
NDRG4-219ENST00000563209.12700No protein-
 
Retained intron
---TSL:NA
NDRG4-237ENST00000566265.12087No protein-
 
Retained intron
---TSL:1
NDRG4-232ENST00000565981.51959No protein-
 
Retained intron
---TSL:5
NDRG4-207ENST00000561720.5879No protein-
 
Retained intron
---TSL:2
NDRG4-227ENST00000564960.1865No protein-
 
Retained intron
---TSL:5
NDRG4-209ENST00000561730.1589No protein-
 
Retained intron
---TSL:4
NDRG4-244ENST00000568005.1586No protein-
 
Retained intron
---TSL:4
NDRG4-212ENST00000562350.1573No protein-
 
Retained intron
---TSL:4
NDRG4-238ENST00000566585.5560No protein-
 
Retained intron
---TSL:2
NDRG4-206ENST00000561681.5557No protein-
 
Retained intron
---TSL:4
NDRG4-220ENST00000563317.5535No protein-
 
Retained intron
---TSL:4
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
SOX2-OT-294ENST00000660576.14101No protein-
 
lncRNA
--Ensembl Canonical
SOX2-OT-292ENST00000656613.14289No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-302ENST00000670501.14282No protein-
 
lncRNA
---
SOX2-OT-298ENST00000665187.14263No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-303ENST00000671456.14240No protein-
 
lncRNA
---
SOX2-OT-293ENST00000657986.14162No protein-
 
lncRNA
---
SOX2-OT-282ENST00000646698.14109No protein-
 
lncRNA
---
SOX2-OT-234ENST00000600801.74085No protein-
 
lncRNA
--TSL:5
SOX2-OT-295ENST00000661842.14077No protein-
 
lncRNA
---
SOX2-OT-291ENST00000654649.14032No protein-
 
lncRNA
---
SOX2-OT-225ENST00000596250.73985No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-218ENST00000498731.63964No protein-
 
lncRNA
--TSL:1
SOX2-OT-275ENST00000645583.23870No protein-
 
lncRNA
---
SOX2-OT-284ENST00000646841.23868No protein-
 
lncRNA
---
SOX2-OT-290ENST00000654538.13844No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-296ENST00000665033.13529No protein-
 
lncRNA
---
SOX2-OT-297ENST00000665112.13462No protein-
 
lncRNA
---
SOX2-OT-287ENST00000647055.13274No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-207ENST00000476964.63226No protein-
 
lncRNA
--GENCODE basicTSL:1
SOX2-OT-286ENST00000647034.12920No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-214ENST00000493116.62779No protein-
 
lncRNA
--TSL:4
SOX2-OT-267ENST00000643236.22454No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-299ENST00000665485.12297No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-263ENST00000642685.12276No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-260ENST00000642301.22271No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-213ENST00000492337.62184No protein-
 
lncRNA
--TSL:2
SOX2-OT-300ENST00000667332.12112No protein-
 
lncRNA
---
SOX2-OT-279ENST00000646296.22094No protein-
 
lncRNA
---
SOX2-OT-262ENST00000642652.22042No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-285ENST00000646949.21980No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-269ENST00000643769.11967No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-272ENST00000644582.11884No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-203ENST00000466034.71772No protein-
 
lncRNA
--TSL:1
SOX2-OT-281ENST00000646683.11766No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-271ENST00000644358.11703No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-248ENST00000628810.21675No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-268ENST00000643667.11622No protein-
 
lncRNA
---
SOX2-OT-274ENST00000645423.21583No protein-
 
lncRNA
---
SOX2-OT-259ENST00000642218.11500No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-265ENST00000642922.11468No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-264ENST00000642823.11444No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-280ENST00000646508.11390No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-226ENST00000597347.51342No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-261ENST00000642429.11279No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-273ENST00000644732.11242No protein-
 
lncRNA
---
SOX2-OT-215ENST00000493521.51239No protein-
 
lncRNA
--GENCODE basicTSL:3
SOX2-OT-289ENST00000647552.11238No protein-
 
lncRNA
---
SOX2-OT-276ENST00000645960.11199No protein-
 
lncRNA
---
SOX2-OT-209ENST00000485035.31162No protein-
 
lncRNA
--GENCODE basicTSL:4
SOX2-OT-270ENST00000644304.11115No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-266ENST00000643131.21097No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-288ENST00000647179.11068No protein-
 
lncRNA
---
SOX2-OT-212ENST00000491282.61040No protein-
 
lncRNA
--TSL:1
SOX2-OT-255ENST00000630482.21012No protein-
 
lncRNA
--TSL:5
SOX2-OT-283ENST00000646712.1989No protein-
 
lncRNA
---
SOX2-OT-206ENST00000476125.5979No protein-
 
lncRNA
--TSL:3
SOX2-OT-258ENST00000631025.2954No protein-
 
lncRNA
--TSL:5
SOX2-OT-256ENST00000630553.1905No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-208ENST00000477928.1902No protein-
 
lncRNA
--TSL:2
SOX2-OT-242ENST00000627530.3873No protein-
 
lncRNA
--TSL:5
SOX2-OT-228ENST00000597828.5864No protein-
 
lncRNA
--TSL:5
SOX2-OT-222ENST00000595084.3850No protein-
 
lncRNA
--TSL:5
SOX2-OT-244ENST00000628211.2847No protein-
 
lncRNA
--TSL:5
SOX2-OT-240ENST00000626948.2836No protein-
 
lncRNA
--TSL:5
SOX2-OT-231ENST00000599082.2836No protein-
 
lncRNA
--TSL:5
SOX2-OT-247ENST00000628496.3798No protein-
 
lncRNA
--TSL:5
SOX2-OT-278ENST00000646056.1796No protein-
 
lncRNA
---
SOX2-OT-232ENST00000600386.6789No protein-
 
lncRNA
--TSL:5
SOX2-OT-241ENST00000627501.3772No protein-
 
lncRNA
--TSL:5
SOX2-OT-233ENST00000600778.3762No protein-
 
lncRNA
--TSL:5
SOX2-OT-249ENST00000629112.3759No protein-
 
lncRNA
--TSL:5
SOX2-OT-220ENST00000593549.6753No protein-
 
lncRNA
--TSL:5
SOX2-OT-210ENST00000487240.3751No protein-
 
lncRNA
--TSL:5
SOX2-OT-257ENST00000630887.3745No protein-
 
lncRNA
--TSL:5
SOX2-OT-245ENST00000628343.3743No protein-
 
lncRNA
--TSL:5
SOX2-OT-239ENST00000626802.2737No protein-
 
lncRNA
--TSL:5
SOX2-OT-224ENST00000595313.5716No protein-
 
lncRNA
--TSL:5
SOX2-OT-243ENST00000627738.1692No protein-
 
lncRNA
--TSL:5
SOX2-OT-252ENST00000629781.3690No protein-
 
lncRNA
--TSL:5
SOX2-OT-253ENST00000629830.3677No protein-
 
lncRNA
--TSL:5
SOX2-OT-221ENST00000594942.5675No protein-
 
lncRNA
--TSL:5
SOX2-OT-238ENST00000626619.2660No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-301ENST00000668295.1654No protein-
 
lncRNA
---
SOX2-OT-254ENST00000630150.2649No protein-
 
lncRNA
--TSL:5
SOX2-OT-227ENST00000597651.6626No protein-
 
lncRNA
--TSL:5
SOX2-OT-237ENST00000626299.3619No protein-
 
lncRNA
--TSL:5
SOX2-OT-201ENST00000460739.5609No protein-
 
lncRNA
--TSL:4
SOX2-OT-223ENST00000595287.1581No protein-
 
lncRNA
--TSL:5
SOX2-OT-216ENST00000497122.5578No protein-
 
lncRNA
--TSL:4
SOX2-OT-250ENST00000629273.2575No protein-
 
lncRNA
--TSL:5
SOX2-OT-251ENST00000629552.2572No protein-
 
lncRNA
--TSL:5
SOX2-OT-202ENST00000461063.6566No protein-
 
lncRNA
--TSL:3
SOX2-OT-204ENST00000469278.5561No protein-
 
lncRNA
--TSL:4
SOX2-OT-217ENST00000498226.5560No protein-
 
lncRNA
--TSL:4
SOX2-OT-229ENST00000598474.4512No protein-
 
lncRNA
--TSL:5
SOX2-OT-236ENST00000625581.2495No protein-
 
lncRNA
--TSL:5
SOX2-OT-235ENST00000600962.6469No protein-
 
lncRNA
--TSL:5
SOX2-OT-219ENST00000593330.1468No protein-
 
lncRNA
--TSL:3
SOX2-OT-205ENST00000472856.1454No protein-
 
lncRNA
--TSL:2
SOX2-OT-246ENST00000628347.1445No protein-
 
lncRNA
--TSL:5
SOX2-OT-277ENST00000645983.1392No protein-
 
lncRNA
---
SOX2-OT-211ENST00000490005.2383No protein-
 
lncRNA
--TSL:2
SOX2-OT-230ENST00000598867.1348No protein-
 
lncRNA
--TSL:5
Description

calcium voltage-gated channel auxiliary subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:1404]

Gene Synonyms

EJM4

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CACNB4-210ENST00000539935.77944520aaENSP00000438949.1
 
Protein coding
CCDS46426O00305-1 NM_000726.5MANE Select v0.93Ensembl CanonicalGENCODE basicTSL:1
CACNB4-243ENST00000637217.18188473aaENSP00000490250.1
 
Protein coding
CCDS82522H0Y476 -GENCODE basicTSL:5
CACNB4-228ENST00000636598.17808473aaENSP00000490247.1
 
Protein coding
CCDS82522H0Y476 -GENCODE basicTSL:5
CACNB4-269ENST00000638005.14615502aaENSP00000489677.1
 
Protein coding
CCDS46427O00305-3 -GENCODE basicTSL:2
CACNB4-245ENST00000637284.12423334aaENSP00000489787.1
 
Protein coding
CCDS82520A0A1B0GTP5 -GENCODE basicTSL:5
CACNB4-209ENST00000534999.62369486aaENSP00000443893.1
 
Protein coding
CCDS46428O00305-2 -GENCODE basicAPPRIS P1TSL:1
CACNB4-206ENST00000439467.62159473aaENSP00000390161.2
 
Protein coding
CCDS82522H0Y476 -GENCODE basicTSL:5
CACNB4-270ENST00000638040.12026410aaENSP00000489883.1
 
Protein coding
CCDS82521A0A1B0GTX8 -GENCODE basicTSL:5
CACNB4-254ENST00000637514.11880334aaENSP00000490304.1
 
Protein coding
CCDS82520A0A1B0GTP5 -GENCODE basicTSL:5
CACNB4-263ENST00000637779.11772423aaENSP00000489732.1
 
Protein coding
CCDS82523A0A1B0GTK1 -GENCODE basicTSL:5
CACNB4-201ENST00000201943.101389458aaENSP00000201943.5
 
Protein coding
CCDS54409O00305-4 -GENCODE basicTSL:1
CACNB4-221ENST00000636130.17748411aaENSP00000490607.1
 
Protein coding
-A0A1B0GTS4 -GENCODE basicTSL:5
CACNB4-238ENST00000636901.17706392aaENSP00000490145.1
 
Protein coding
-A0A1B0GUK4 -GENCODE basicTSL:5
CACNB4-257ENST00000637547.17658307aaENSP00000490124.1
 
Protein coding
-A0A1B0GUI5 -GENCODE basicTSL:5
CACNB4-222ENST00000636350.17654452aaENSP00000489621.1
 
Protein coding
-A0A1B0GTA9 -GENCODE basicTSL:5
CACNB4-246ENST00000637309.17409256aaENSP00000490127.1
 
Protein coding
-A0A1B0GUI8 -GENCODE basicTSL:5
CACNB4-229ENST00000636617.15757407aaENSP00000490660.1
 
Protein coding
-A0A1B0GVU5 -GENCODE basicTSL:5
CACNB4-239ENST00000636947.15575307aaENSP00000490337.1
 
Protein coding
-A0A1B0GV16 -GENCODE basicTSL:1
CACNB4-225ENST00000636442.14232461aaENSP00000489779.1
 
Protein coding
-A0A1B0GTN8 -GENCODE basicTSL:5
CACNB4-233ENST00000636773.14143411aaENSP00000489818.1
 
Protein coding
-A0A1B0GTS4 -GENCODE basicTSL:5
CACNB4-273ENST00000638091.14061424aaENSP00000489967.1
 
Protein coding
-A0A1B0GU53 -GENCODE basicTSL:5
CACNB4-260ENST00000637762.13800490aaENSP00000489876.1
 
Protein coding
-A0A1B0GTX2 -GENCODE basicTSL:5
CACNB4-234ENST00000636785.13787363aaENSP00000489788.1
 
Protein coding
-A0A1B0GTP6 -GENCODE basicTSL:5
CACNB4-216ENST00000635890.13567113aaENSP00000489915.1
 
Protein coding
-A0A1B0GU07 -TSL:5CDS 5' incomplete
CACNB4-220ENST00000636129.12283323aaENSP00000489912.1
 
Protein coding
-A0A1B0GU05 -GENCODE basicTSL:5
CACNB4-203ENST00000397327.72112441aaENSP00000380490.3
 
Protein coding
-E7EN11 -GENCODE basicTSL:5
CACNB4-250ENST00000637418.12015445aaENSP00000489679.1
 
Protein coding
-A0A1B0GTF6 -GENCODE basicTSL:5
CACNB4-202ENST00000360283.111885472aaENSP00000353425.8
 
Protein coding
-A0A1B0GXG0 -GENCODE basicTSL:5
CACNB4-204ENST00000427385.61776479aaENSP00000410978.2
 
Protein coding
-A0A1C7CYX2 -GENCODE basicTSL:5
CACNB4-223ENST00000636380.11756351aaENSP00000490488.1
 
Protein coding
-A0A1B0GVF0 -GENCODE basicTSL:5
CACNB4-219ENST00000636108.11698334aaENSP00000490176.1
 
Protein coding
-A0A1B0GUM9 -GENCODE basicTSL:5
CACNB4-231ENST00000636721.11542272aaENSP00000490795.1
 
Protein coding
-A0A1B0GW63 -GENCODE basicTSL:5
CACNB4-242ENST00000637216.11292341aaENSP00000490910.1
 
Protein coding
-A0A1B0GWF9 -TSL:5CDS 3' incomplete
CACNB4-205ENST00000434468.2720125aaENSP00000399242.2
 
Protein coding
-C9J224 -TSL:5CDS 3' incomplete
CACNB4-271ENST00000638056.1605124aaENSP00000490787.1
 
Protein coding
-A0A1B0GW58 -TSL:5CDS 5' incomplete
CACNB4-226ENST00000636496.143040aaENSP00000490249.1
 
Protein coding
-A0A1B0GUU5 -TSL:5CDS 3' incomplete
CACNB4-212ENST00000635738.17854180aaENSP00000489881.1
 
Nonsense mediated decay
-A0A1B0GTX6 -TSL:5
CACNB4-227ENST00000636507.14688194aaENSP00000490252.1
 
Nonsense mediated decay
-A0A1B0GUU8 -TSL:5
CACNB4-218ENST00000635930.1448480aaENSP00000489953.1
 
Nonsense mediated decay
-A0A1B0GU42 -TSL:5
CACNB4-244ENST00000637232.14024145aaENSP00000490138.1
 
Nonsense mediated decay
-A0A1B0GUJ7 -TSL:5
CACNB4-241ENST00000637132.13877219aaENSP00000490651.1
 
Nonsense mediated decay
-A0A1B0GVT6 -TSL:5
CACNB4-251ENST00000637436.1352048aaENSP00000489746.1
 
Nonsense mediated decay
-A0A1B0GTL1 -TSL:5
CACNB4-247ENST00000637312.13485202aaENSP00000490144.1
 
Nonsense mediated decay
-A0A1B0GUK3 -TSL:5
CACNB4-232ENST00000636762.13191194aaENSP00000490918.1
 
Nonsense mediated decay
-A0A1B0GWG5 -TSL:5
CACNB4-258ENST00000637550.13038158aaENSP00000489943.1
 
Nonsense mediated decay
-A0A1B0GU32 -TSL:5
CACNB4-217ENST00000635904.12444215aaENSP00000490430.1
 
Nonsense mediated decay
-A0A1B0GUW8 -TSL:5
CACNB4-249ENST00000637330.1210238aaENSP00000490817.1
 
Nonsense mediated decay
-A0A1B0GW81 -TSL:5
CACNB4-264ENST00000637828.11831393aaENSP00000490443.1
 
Nonsense mediated decay
-A0A1B0GVB2 -TSL:5
CACNB4-253ENST00000637491.11751207aaENSP00000490510.1
 
Nonsense mediated decay
-E7DBM8 -TSL:5
CACNB4-256ENST00000637535.11731232aaENSP00000490891.1
 
Nonsense mediated decay
-A0A1B0GTH0 -TSL:5
CACNB4-230ENST00000636664.11698232aaENSP00000490572.1
 
Nonsense mediated decay
-A0A1B0GTH0 -TSL:5
CACNB4-274ENST00000638150.11646168aaENSP00000490501.1
 
Nonsense mediated decay
-A0A1B0GVG1 -TSL:5
CACNB4-268ENST00000637956.1143080aaENSP00000490298.1
 
Nonsense mediated decay
-A0A1B0GU42 -TSL:5
CACNB4-240ENST00000637007.1858110aaENSP00000489772.1
 
Nonsense mediated decay
-A0A1B0GTN2 -TSL:5CDS 5' incomplete
CACNB4-224ENST00000636390.155879aaENSP00000490603.1
 
Nonsense mediated decay
-A0A1B0GVP7 -TSL:4CDS 5' incomplete
CACNB4-214ENST00000635803.13395No protein-
 
Processed transcript
---TSL:5
CACNB4-266ENST00000637913.12034No protein-
 
Processed transcript
---TSL:5
CACNB4-213ENST00000635743.1745No protein-
 
Processed transcript
---TSL:5
CACNB4-236ENST00000636831.18595No protein-
 
Retained intron
---TSL:5
CACNB4-265ENST00000637884.18233No protein-
 
Retained intron
---TSL:NA
CACNB4-272ENST00000638083.16849No protein-
 
Retained intron
---TSL:NA
CACNB4-259ENST00000637622.15209No protein-
 
Retained intron
---TSL:5
CACNB4-252ENST00000637479.14858No protein-
 
Retained intron
---TSL:5
CACNB4-237ENST00000636834.14589No protein-
 
Retained intron
---TSL:5
CACNB4-211ENST00000635731.14299No protein-
 
Retained intron
---TSL:NA
CACNB4-207ENST00000470066.24036No protein-
 
Retained intron
---TSL:5
CACNB4-267ENST00000637942.14020No protein-
 
Retained intron
---TSL:5
CACNB4-235ENST00000636810.13754No protein-
 
Retained intron
---TSL:5
CACNB4-248ENST00000637319.13549No protein-
 
Retained intron
---TSL:5
CACNB4-262ENST00000637773.13174No protein-
 
Retained intron
---TSL:5
CACNB4-255ENST00000637530.13104No protein-
 
Retained intron
---TSL:5
CACNB4-261ENST00000637765.12955No protein-
 
Retained intron
---TSL:5
CACNB4-215ENST00000635835.11807No protein-
 
Retained intron
---TSL:5
CACNB4-208ENST00000475848.21174No protein-
 
Retained intron
---TSL:NA
Statistics

Exons: 5, Coding exons: 0, Transcript length: 4,020 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000637942.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x253e6f98)