Human (GRCh38.p14)
Description

tRNA splicing endonuclease subunit 54 [Source:HGNC Symbol;Acc:HGNC:27561]

Gene Synonyms

SEN54, SEN54L

Location
About this transcript

This transcript has 10 exons, is associated with 4638 variant alleles and maps to 568 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000333213.11TSEN54-2011937526aaENSP00000327487.6
 
Protein coding
CCDS11724Q7Z6J9-1 NM_207346.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000680999.1TSEN54-2192093597aaENSP00000504984.1
 
Protein coding
A0A7P0Z413 -GENCODE basic
ENST00000545228.3TSEN54-2032063562aaENSP00000438169.3
 
Protein coding
J9JIH8 -GENCODE basicTSL:5
ENST00000434205.8TSEN54-2022010425aaENSP00000406559.4
 
Protein coding
E7EN92 -GENCODE basicTSL:5
ENST00000679928.1TSEN54-2173048192aaENSP00000506071.1
 
Nonsense mediated decay
A0A7P0Z4H0 --
ENST00000681282.1TSEN54-2202895260aaENSP00000506339.1
 
Nonsense mediated decay
A0A7P0Z4K6 --
ENST00000679782.1TSEN54-2152082500aaENSP00000505995.1
 
Nonsense mediated decay
A0A7P0TA59 --
ENST00000679429.1TSEN54-2131921177aaENSP00000505403.1
 
Nonsense mediated decay
Q7Z6J9-2 --
ENST00000583818.2TSEN54-211870177aaENSP00000461928.2
 
Nonsense mediated decay
J3KRC5 -TSL:5
ENST00000583173.5TSEN54-208798178aaENSP00000463619.1
 
Nonsense mediated decay
J3QLM6 -TSL:5
ENST00000679370.1TSEN54-2123414No protein-
 
Retained intron
---
ENST00000580013.6TSEN54-2073036No protein-
 
Retained intron
--TSL:4
ENST00000579449.2TSEN54-2062632No protein-
 
Retained intron
--TSL:2
ENST00000680528.1TSEN54-2182555No protein-
 
Retained intron
---
ENST00000679919.1TSEN54-2162138No protein-
 
Retained intron
---
ENST00000679443.1TSEN54-2141936No protein-
 
Retained intron
---
ENST00000577197.2TSEN54-2041100No protein-
 
Retained intron
--TSL:2
ENST00000578415.1TSEN54-205994No protein-
 
Retained intron
--TSL:3
ENST00000583454.1TSEN54-209733No protein-
 
Retained intron
--TSL:3
ENST00000583634.1TSEN54-210282No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 10, Coding exons: 0, Transcript length: 2,555 bps,

Version

ENST00000680528.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.