Human (GRCh38.p14)
Description

tRNA splicing endonuclease subunit 54 [Source:HGNC Symbol;Acc:HGNC:27561]

Gene Synonyms

SEN54, SEN54L

Location
About this transcript

This transcript has 9 exons, is associated with 4554 variant alleles and maps to 489 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000333213.11TSEN54-2011937526aaENSP00000327487.6
 
Protein coding
CCDS11724Q7Z6J9-1 NM_207346.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000680999.1TSEN54-2192093597aaENSP00000504984.1
 
Protein coding
A0A7P0Z413 -GENCODE basic
ENST00000545228.3TSEN54-2032063562aaENSP00000438169.3
 
Protein coding
J9JIH8 -GENCODE basicTSL:5
ENST00000434205.8TSEN54-2022010425aaENSP00000406559.4
 
Protein coding
E7EN92 -GENCODE basicTSL:5
ENST00000679928.1TSEN54-2173048192aaENSP00000506071.1
 
Nonsense mediated decay
A0A7P0Z4H0 --
ENST00000681282.1TSEN54-2202895260aaENSP00000506339.1
 
Nonsense mediated decay
A0A7P0Z4K6 --
ENST00000679782.1TSEN54-2152082500aaENSP00000505995.1
 
Nonsense mediated decay
A0A7P0TA59 --
ENST00000679429.1TSEN54-2131921177aaENSP00000505403.1
 
Nonsense mediated decay
Q7Z6J9-2 --
ENST00000583818.2TSEN54-211870177aaENSP00000461928.2
 
Nonsense mediated decay
J3KRC5 -TSL:5
ENST00000583173.5TSEN54-208798178aaENSP00000463619.1
 
Nonsense mediated decay
J3QLM6 -TSL:5
ENST00000679370.1TSEN54-2123414No protein-
 
Retained intron
---
ENST00000580013.6TSEN54-2073036No protein-
 
Retained intron
--TSL:4
ENST00000579449.2TSEN54-2062632No protein-
 
Retained intron
--TSL:2
ENST00000680528.1TSEN54-2182555No protein-
 
Retained intron
---
ENST00000679919.1TSEN54-2162138No protein-
 
Retained intron
---
ENST00000679443.1TSEN54-2141936No protein-
 
Retained intron
---
ENST00000577197.2TSEN54-2041100No protein-
 
Retained intron
--TSL:2
ENST00000578415.1TSEN54-205994No protein-
 
Retained intron
--TSL:3
ENST00000583454.1TSEN54-209733No protein-
 
Retained intron
--TSL:3
ENST00000583634.1TSEN54-210282No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,936 bps,

Version

ENST00000679443.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.