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EnsemblEnsembl Home
Description

sarcosine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:10536]

Gene Synonyms

DMGDHL1, SDH

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000439388.6SARDH-2063215918aaENSP00000403084.1
 
Protein coding
CCDS6978Q9UL12-1 NM_001134707.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:2
ENST00000371872.8SARDH-2043344918aaENSP00000360938.4
 
Protein coding
CCDS6978Q9UL12-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000371868.5SARDH-2032266368aaENSP00000360934.1
 
Protein coding
-Q5SYV2 -GENCODE basicTSL:2
ENST00000427237.6SARDH-2051957608aaENSP00000394210.2
 
Protein coding
-Q5SYV1 -TSL:2CDS 3' incomplete
ENST00000298628.6SARDH-2011484396aaENSP00000298628.5
 
Protein coding
-Q9UL10 -GENCODE basicTSL:1
ENST00000371867.5SARDH-2021326283aaENSP00000360933.1
 
Protein coding
-Q5SYU9 -GENCODE basicTSL:1
ENST00000469828.1SARDH-207432No protein-
 
Processed transcript
---TSL:2
Description

farnesyl diphosphate synthase [Source:HGNC Symbol;Acc:HGNC:3631]

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000368356.9FDPS-2021417419aaENSP00000357340.4
 
Protein coding
CCDS1110P14324-1 NM_002004.4MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:2
ENST00000356657.10FDPS-2011478419aaENSP00000349078.6
 
Protein coding
CCDS1110P14324-1 -GENCODE basicTSL:1
ENST00000447866.5FDPS-2031256353aaENSP00000391755.1
 
Protein coding
CCDS44241P14324-2 -GENCODE basicAPPRIS P1TSL:5
ENST00000612683.1FDPS-2211198353aaENSP00000478235.1
 
Protein coding
CCDS44241P14324-2 -GENCODE basicAPPRIS P1TSL:5
ENST00000611010.4FDPS-2201196248aaENSP00000483188.1
 
Protein coding
CCDS72940A0A087X090 -GENCODE basicTSL:5
ENST00000467076.5FDPS-2061178353aaENSP00000480142.1
 
Protein coding
CCDS44241P14324-2 -GENCODE basicAPPRIS P1TSL:3
ENST00000491013.5FDPS-216912274aaENSP00000479557.1
 
Protein coding
-A0A087WVN4 -TSL:5CDS 3' incomplete
ENST00000465559.5FDPS-205677174aaENSP00000484099.1
 
Protein coding
-A0A087X1D8 -TSL:3CDS 3' incomplete
ENST00000474345.5FDPS-21071380aaENSP00000478032.1
 
Nonsense mediated decay
-A0A087WTP2 -TSL:3
ENST00000468479.5FDPS-207938No protein-
 
Processed transcript
---TSL:2
ENST00000470171.5FDPS-208746No protein-
 
Processed transcript
---TSL:2
ENST00000477057.5FDPS-211741No protein-
 
Processed transcript
---TSL:2
ENST00000492244.5FDPS-217673No protein-
 
Processed transcript
---TSL:3
ENST00000487002.1FDPS-2122017No protein-
 
Retained intron
---TSL:2
ENST00000461507.5FDPS-2041022No protein-
 
Retained intron
---TSL:2
ENST00000489003.5FDPS-213976No protein-
 
Retained intron
---TSL:2
ENST00000495308.5FDPS-219808No protein-
 
Retained intron
---TSL:2
ENST00000490140.1FDPS-215680No protein-
 
Retained intron
---TSL:2
ENST00000471117.5FDPS-209630No protein-
 
Retained intron
---TSL:3
ENST00000492887.5FDPS-218554No protein-
 
Retained intron
---TSL:2
ENST00000489324.1FDPS-214475No protein-
 
Retained intron
---TSL:2
Description

LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]

Gene Synonyms

CMD1C, KIAA0613, PDLIM6, ZASP

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000361373.9LDB3-2025363727aaENSP00000355296.3
 
Protein coding
CCDS7377O75112-1 NM_007078.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000429277.7LDB3-2055033617aaENSP00000401437.3
 
Protein coding
CCDS41544O75112-2 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000623056.4LDB3-2092309732aaENSP00000485500.1
 
Protein coding
CCDS53550O75112-7 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000372056.8LDB3-2031868398aaENSP00000361126.4
 
Protein coding
CCDS53549O75112-4 -GENCODE basicTSL:1
ENST00000623007.3LDB3-2081664330aaENSP00000485389.1
 
Protein coding
CCDS44450O75112-5 -GENCODE basicTSL:1
ENST00000263066.11LDB3-2011611283aaENSP00000263066.7
 
Protein coding
CCDS41545O75112-6 NM_001368067.1MANE Plus Clinical v0.95GENCODE basicTSL:1
ENST00000372066.8LDB3-2041607283aaENSP00000361136.3
 
Protein coding
CCDS41545O75112-6 -GENCODE basicTSL:1
ENST00000693680.1LDB3-2223652680aaENSP00000509539.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
ENST00000688001.1LDB3-2152511664aaENSP00000508987.1
 
Protein coding
-V5T7C5 -GENCODE basicAPPRIS ALT1
ENST00000689740.1LDB3-2192296680aaENSP00000510300.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
ENST00000689296.1LDB3-2182212664aaENSP00000510609.1
 
Protein coding
-V5T7C5 -GENCODE basicAPPRIS ALT1
ENST00000688678.1LDB3-2161590302aaENSP00000510048.1
 
Protein coding
---GENCODE basic
ENST00000691462.1LDB3-2201539215aaENSP00000509930.1
 
Protein coding
---GENCODE basic
ENST00000688785.1LDB3-2171539215aaENSP00000509572.1
 
Protein coding
---GENCODE basic
ENST00000477489.1LDB3-20643381aaENSP00000485538.1
 
Protein coding
-A0A096LPD7 -TSL:1CDS 5' incomplete
ENST00000542786.2LDB3-2071891231aaENSP00000438866.1
 
Nonsense mediated decay
-A0A0C4DGG7 -TSL:2
ENST00000687856.1LDB3-214592111aaENSP00000510221.1
 
Nonsense mediated decay
-A0A0S2Z521 --
ENST00000686176.1LDB3-211477No protein-
 
Processed transcript
----
ENST00000687598.1LDB3-2133615No protein-
 
Retained intron
----
ENST00000687154.1LDB3-212591No protein-
 
Retained intron
----
ENST00000691495.1LDB3-221559No protein-
 
Retained intron
----
ENST00000686051.1LDB3-210512No protein-
 
Retained intron
----
Description

developmentally regulated GTP binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3030]

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000225729.8DRG2-2011900364aaENSP00000225729.3
 
Protein coding
CCDS11191P55039 NM_001388.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000395726.8DRG2-2021897343aaENSP00000379076.4
 
Protein coding
CCDS82082A8MZF9 -GENCODE basicTSL:5
ENST00000583355.1DRG2-220891161aaENSP00000463256.1
 
Protein coding
-J3QKV7 -GENCODE basicTSL:3
ENST00000579601.5DRG2-213550158aaENSP00000464076.1
 
Protein coding
-J3QR71 -TSL:4CDS 3' incomplete
ENST00000580929.5DRG2-215389113aaENSP00000462060.1
 
Protein coding
-J3KRL5 -TSL:5CDS 3' incomplete
ENST00000467099.6DRG2-203253190aaENSP00000463522.1
 
Nonsense mediated decay
-J3QLF3 -TSL:2
ENST00000580055.5DRG2-2141838244aaENSP00000463268.1
 
Nonsense mediated decay
-J3QKW7 -TSL:5
ENST00000582314.5DRG2-216153090aaENSP00000464004.1
 
Nonsense mediated decay
-J3QLF3 -TSL:5
ENST00000496428.6DRG2-20679590aaENSP00000462978.1
 
Nonsense mediated decay
-J3QLF3 -TSL:3
ENST00000579224.5DRG2-212683172aaENSP00000464244.1
 
Nonsense mediated decay
-J3QRI9 -TSL:5
ENST00000577450.5DRG2-208566112aaENSP00000463436.1
 
Nonsense mediated decay
-J3QL90 -TSL:4
ENST00000582419.5DRG2-21756522aaENSP00000463747.1
 
Nonsense mediated decay
-J3QQI1 -TSL:4
ENST00000582528.5DRG2-2185342No protein-
 
Retained intron
---TSL:2
ENST00000482564.1DRG2-2051856No protein-
 
Retained intron
---TSL:2
ENST00000583162.1DRG2-2191066No protein-
 
Retained intron
---TSL:2
ENST00000497744.1DRG2-207964No protein-
 
Retained intron
---TSL:2
ENST00000577771.5DRG2-209641No protein-
 
Retained intron
---TSL:2
ENST00000473213.1DRG2-204595No protein-
 
Retained intron
---TSL:2
ENST00000578767.5DRG2-211577No protein-
 
Retained intron
---TSL:4
ENST00000578173.5DRG2-210535No protein-
 
Retained intron
---TSL:2
ENST00000584212.1DRG2-221465No protein-
 
Retained intron
---TSL:4
Description

acyl-CoA thioesterase 11 [Source:MGI Symbol;Acc:MGI:1913736]

Gene Synonyms

1110020M10Rik, 2010309H15Rik, BFIT1, Thea, Them1

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000102762.10Acot11-2025689594aaENSMUSP00000099823.4
 
Protein coding
CCDS18426Q543P6 Q8VHQ9 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000065253.13Acot11-2012939614aaENSMUSP00000069636.7
 
Protein coding
CCDS84764A2AVR6 GENCODE basicTSL:1
ENSMUST00000145061.8Acot11-205596107aaENSMUSP00000125123.2
 
Protein coding
-E0CXP8 TSL:5CDS 3' incomplete
ENSMUST00000148688.2Acot11-20633092aaENSMUSP00000124385.2
 
Protein coding
-E0CYA0 TSL:5CDS 3' incomplete
ENSMUST00000140541.8Acot11-203262076aaENSMUSP00000124567.2
 
Nonsense mediated decay
-F6SS52 TSL:5CDS 5' incomplete
ENSMUST00000156567.2Acot11-20757589aaENSMUSP00000123942.2
 
Nonsense mediated decay
-E0CYS0 TSL:5
ENSMUST00000144809.2Acot11-204401No protein-
 
Processed transcript
--TSL:5
Description

neurexin 1 [Source:HGNC Symbol;Acc:HGNC:8008]

Gene Synonyms

Hs.22998, KIAA0578

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000401669.7NRXN1-20490381507aaENSP00000385017.2
 
Protein coding
CCDS82451E7ERL8 NM_001330078.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENST00000406316.6NRXN1-20993751477aaENSP00000384311.2
 
Protein coding
CCDS54360Q9ULB1-1 -GENCODE basicTSL:5
ENST00000625672.2NRXN1-21981131496aaENSP00000485887.1
 
Protein coding
CCDS82450Q9ULB1-2 -GENCODE basicAPPRIS P3TSL:1
ENST00000404971.5NRXN1-20675781547aaENSP00000385142.1
 
Protein coding
CCDS46282Q9ULB1-3 -GENCODE basicTSL:1
ENST00000405581.3NRXN1-2085078278aaENSP00000385310.1
 
Protein coding
CCDS86840E7EQN4 -GENCODE basicTSL:1
ENST00000630543.2NRXN1-23045001499aaENSP00000486879.1
 
Protein coding
CCDS82449A0A1D5RMU6 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000342183.9NRXN1-2023315442aaENSP00000341184.5
 
Protein coding
CCDS1845P58400-1 -GENCODE basicTSL:1
ENST00000401710.5NRXN1-2052873472aaENSP00000385580.2
 
Protein coding
CCDS82446P58400-2 -GENCODE basicTSL:5
ENST00000626899.1NRXN1-2232543277aaENSP00000485912.1
 
Protein coding
CCDS86838A0A0D9SEQ7 -GENCODE basicTSL:2
ENST00000628364.2NRXN1-2252444469aaENSP00000485815.1
 
Protein coding
CCDS82447A0A0D9SEM5 -GENCODE basicTSL:5
ENST00000412315.5NRXN1-2102215139aaENSP00000396738.2
 
Protein coding
CCDS82445H0Y568 -GENCODE basicTSL:1
ENST00000378262.7NRXN1-2031338142aaENSP00000367510.4
 
Protein coding
CCDS82444H7BYC7 -GENCODE basicTSL:2
ENST00000675235.1NRXN1-2655861290aaENSP00000501718.1
 
Protein coding
-A0A6Q8PFA2 -GENCODE basic
ENST00000405472.7NRXN1-20757241495aaENSP00000434015.2
 
Protein coding
-A0A0R4J2G7 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000637511.1NRXN1-2563651293aaENSP00000490494.1
 
Protein coding
-A0A1B0GVF4 -GENCODE basicTSL:5
ENST00000636345.1NRXN1-2453595143aaENSP00000489745.1
 
Protein coding
-A0A1B0GTL0 -GENCODE basicTSL:5
ENST00000635519.1NRXN1-239355362aaENSP00000489258.1
 
Protein coding
-A0A0U1RR00 -GENCODE basicTSL:5
ENST00000628515.2NRXN1-2263243459aaENSP00000486544.1
 
Protein coding
-A0A0D9SFF4 -GENCODE basicTSL:5
ENST00000636066.1NRXN1-2412832155aaENSP00000490017.1
 
Protein coding
-A0A1B0GU94 -TSL:5CDS 5' incomplete
ENST00000625891.2NRXN1-2201164176aaENSP00000489108.1
 
Protein coding
-A0A0U1RQP8 -GENCODE basicTSL:4
ENST00000630656.1NRXN1-23183775aaENSP00000486993.1
 
Protein coding
-A0A0D9SFY6 -GENCODE basicTSL:5
ENST00000625320.2NRXN1-218641213aaENSP00000486253.1
 
Protein coding
-A0A0D9SF36 -TSL:3CDS 5' and 3' incomplete
ENST00000627198.2NRXN1-224518136aaENSP00000487268.1
 
Protein coding
-A0A0D9SG96 -TSL:5CDS 5' incomplete
ENST00000495871.2NRXN1-216506169aaENSP00000486185.1
 
Protein coding
-A0A0D9SF07 -TSL:4CDS 5' and 3' incomplete
ENST00000496792.3NRXN1-217464126aaENSP00000487165.1
 
Protein coding
-A0A0D9SG60 -TSL:2CDS 5' incomplete
ENST00000638037.1NRXN1-26310033aaENSP00000490210.1
 
Protein coding
-A0A1B0GUR2 -TSL:5CDS 5' and 3' incomplete
ENST00000331040.9NRXN1-2013044903aaENSP00000489573.1
 
Nonsense mediated decay
-A0A0U1RRK7 -TSL:2
ENST00000626249.2NRXN1-222182356aaENSP00000485723.2
 
Nonsense mediated decay
-A0A0D9SEJ1 -TSL:5
ENST00000637906.1NRXN1-2611679123aaENSP00000490198.1
 
Nonsense mediated decay
-A0A1B0GUQ1 -TSL:5CDS 5' incomplete
ENST00000634431.1NRXN1-2333692No protein-
 
Processed transcript
---TSL:5
ENST00000634764.1NRXN1-2343674No protein-
 
Processed transcript
---TSL:5
ENST00000635164.1NRXN1-2363321No protein-
 
Processed transcript
---TSL:5
ENST00000636298.1NRXN1-2433010No protein-
 
Processed transcript
---TSL:5
ENST00000637889.1NRXN1-2602717No protein-
 
Processed transcript
---TSL:5
ENST00000634412.1NRXN1-2322249No protein-
 
Processed transcript
---TSL:5
ENST00000635264.1NRXN1-2371282No protein-
 
Processed transcript
---TSL:5
ENST00000635310.1NRXN1-2381246No protein-
 
Processed transcript
---TSL:5
ENST00000628761.1NRXN1-227796No protein-
 
Processed transcript
---TSL:3
ENST00000636104.1NRXN1-242789No protein-
 
Processed transcript
---TSL:5
ENST00000484192.3NRXN1-215757No protein-
 
Processed transcript
---TSL:5
ENST00000637975.1NRXN1-262754No protein-
 
Processed transcript
---TSL:5
ENST00000447773.2NRXN1-212736No protein-
 
Processed transcript
---TSL:5
ENST00000637368.1NRXN1-253736No protein-
 
Processed transcript
---TSL:5
ENST00000635126.1NRXN1-235715No protein-
 
Processed transcript
---TSL:5
ENST00000416262.6NRXN1-211637No protein-
 
Processed transcript
---TSL:2
ENST00000629717.1NRXN1-228623No protein-
 
Processed transcript
---TSL:2
ENST00000630431.1NRXN1-229574No protein-
 
Processed transcript
---TSL:5
ENST00000637021.1NRXN1-250121No protein-
 
Processed transcript
---TSL:5
ENST00000636736.1NRXN1-247100No protein-
 
Processed transcript
---TSL:5
ENST00000636818.1NRXN1-248100No protein-
 
Processed transcript
---TSL:5
ENST00000635834.1NRXN1-240100No protein-
 
Processed transcript
---TSL:5
ENST00000637151.1NRXN1-251100No protein-
 
Processed transcript
---TSL:5
ENST00000636342.1NRXN1-244100No protein-
 
Processed transcript
---TSL:5
ENST00000637207.1NRXN1-252100No protein-
 
Processed transcript
---TSL:5
ENST00000637653.1NRXN1-258100No protein-
 
Processed transcript
---TSL:5
ENST00000637459.1NRXN1-254100No protein-
 
Processed transcript
---TSL:5
ENST00000637605.1NRXN1-257100No protein-
 
Processed transcript
---TSL:5
ENST00000637472.1NRXN1-255100No protein-
 
Processed transcript
---TSL:5
ENST00000637679.1NRXN1-259100No protein-
 
Processed transcript
---TSL:5
ENST00000638060.1NRXN1-264100No protein-
 
Processed transcript
---TSL:5
ENST00000636599.1NRXN1-246100No protein-
 
Processed transcript
---TSL:5
ENST00000637006.1NRXN1-24994No protein-
 
Processed transcript
---TSL:5
ENST00000462791.2NRXN1-2131676No protein-
 
Retained intron
---TSL:4
ENST00000474354.1NRXN1-214574No protein-
 
Retained intron
---TSL:4
ENST00000626192.1NRXN1-221360No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,215 bps, Translation length: 139 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS82445

Transcript Support Level (TSL)

TSL:1

Version

ENST00000412315.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x31565980)