Human (GRCh38.p14)
Description

chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]

Gene Synonyms

BC022889, FLJ12178, KIAA0308

Location
About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 11082 variant alleles and maps to 156 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000447540.6CHD9-203115472897aaENSP00000396345.2
 
Protein coding
CCDS76865Q3L8U1-1 NM_001308319.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:5
ENST00000566029.5CHD9-218131102881aaENSP00000457466.1
 
Protein coding
CCDS45485Q3L8U1-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000564845.5CHD9-213115042881aaENSP00000455307.1
 
Protein coding
CCDS45485Q3L8U1-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000398510.7CHD9-202113372897aaENSP00000381522.3
 
Protein coding
CCDS76865Q3L8U1-1 -GENCODE basicAPPRIS P4TSL:1
ENST00000615216.4CHD9-22110603963aaENSP00000478361.1
 
Protein coding
A0A087WU44 -GENCODE basicTSL:5
ENST00000565803.2CHD9-21695652424aaENSP00000457355.2
 
Protein coding
CCDS92161H3BTW3 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000565832.5CHD9-2172169632aaENSP00000456793.1
 
Protein coding
H3BSP3 -TSL:1CDS 3' incomplete
ENST00000565442.1CHD9-215703125aaENSP00000456415.1
 
Protein coding
H3BRU9 -TSL:2CDS 3' incomplete
ENST00000563410.1CHD9-20848853aaENSP00000457929.1
 
Protein coding
H3BV31 -TSL:2CDS 3' incomplete
ENST00000562785.1CHD9-20535991aaENSP00000460155.1
 
Protein coding
I3L340 -TSL:3CDS 3' incomplete
ENST00000564641.1CHD9-212589113aaENSP00000462008.1
 
Nonsense mediated decay
J3KRH9 -TSL:4CDS 5' incomplete
ENST00000564600.6CHD9-211539122aaENSP00000462685.1
 
Nonsense mediated decay
J3KSW5 -TSL:4CDS 5' incomplete
ENST00000564582.2CHD9-210968No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000565119.1CHD9-214824No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000561869.1CHD9-204720No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000569794.1CHD9-220485No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000562791.1CHD9-206242No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000219084.10CHD9-2018739No protein-
 
Retained intron
--TSL:1
ENST00000564255.5CHD9-2092896No protein-
 
Retained intron
--TSL:5
ENST00000569225.5CHD9-2191862No protein-
 
Retained intron
--TSL:2
ENST00000562806.1CHD9-207400No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 2, Coding exons: 1, Transcript length: 488 bps, Translation length: 53 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

CDS 3' incomplete

Version

ENST00000563410.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.