Human (GRCh38.p14)
Description

DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347]

Gene Synonyms

PRP28, PRPF28, SNRNP100, U5-100KD

Location
About this transcript

This transcript has 5 exons, is associated with 2099 variant alleles and maps to 338 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000308025.8DDX23-2013256820aaENSP00000310723.2
 
Protein coding
CCDS8770Q9BUQ8-1 NM_004818.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000703179.1DDX23-2203130783aaENSP00000515223.1
 
Protein coding
A0A8V8TR86 -GENCODE basic
ENST00000550834.1DDX23-207869259aaENSP00000449657.1
 
Protein coding
H0YIL9 -TSL:5CDS 5' incomplete
ENST00000552512.5DDX23-214696182aaENSP00000449639.1
 
Protein coding
F8VVA2 -TSL:4CDS 3' incomplete
ENST00000551468.1DDX23-211567138aaENSP00000446948.1
 
Protein coding
F8W1J5 -TSL:5CDS 3' incomplete
ENST00000703181.1DDX23-2223648619aaENSP00000515225.1
 
Nonsense mediated decay
A0A8V8TRI2 -CDS 5' incomplete
ENST00000552369.6DDX23-2133372184aaENSP00000515224.1
 
Nonsense mediated decay
A0A8V8TQQ5 -TSL:4
ENST00000703182.1DDX23-2232662435aaENSP00000515226.1
 
Nonsense mediated decay
A0A8V8TQ76 -CDS 5' incomplete
ENST00000547135.5DDX23-2021377108aaENSP00000446770.1
 
Nonsense mediated decay
Q9BUQ8-2 -TSL:2
ENST00000552802.5DDX23-216926152aaENSP00000448542.1
 
Nonsense mediated decay
H0YI52 -TSL:5CDS 5' incomplete
ENST00000703180.1DDX23-2213109No protein-
 
Protein coding CDS not defined
---
ENST00000703178.1DDX23-2191779No protein-
 
Protein coding CDS not defined
---
ENST00000553182.5DDX23-218779No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000552555.1DDX23-215562No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000549795.6DDX23-2063721No protein-
 
Retained intron
--TSL:2
ENST00000551098.6DDX23-2083452No protein-
 
Retained intron
--TSL:2
ENST00000547290.2DDX23-2042834No protein-
 
Retained intron
--TSL:2
ENST00000547165.5DDX23-203958No protein-
 
Retained intron
--TSL:5
ENST00000551331.1DDX23-210706No protein-
 
Retained intron
--TSL:2
ENST00000552069.1DDX23-212592No protein-
 
Retained intron
--TSL:3
ENST00000551189.1DDX23-209587No protein-
 
Retained intron
--TSL:4
ENST00000547842.1DDX23-205554No protein-
 
Retained intron
--TSL:4
ENST00000553065.1DDX23-217336No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,834 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000547290.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]