Human (GRCh38.p14)
Description

DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347]

Gene Synonyms

PRP28, PRPF28, SNRNP100, U5-100KD

Location
About this transcript

This transcript has 17 exons, is annotated with 33 domains and features, is associated with 10853 variant alleles and maps to 616 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000308025.8DDX23-2013256820aaENSP00000310723.2
 
Protein coding
CCDS8770Q9BUQ8-1 NM_004818.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000703179.1DDX23-2203130783aaENSP00000515223.1
 
Protein coding
A0A8V8TR86 -GENCODE basic
ENST00000550834.1DDX23-207869259aaENSP00000449657.1
 
Protein coding
H0YIL9 -TSL:5CDS 5' incomplete
ENST00000552512.5DDX23-214696182aaENSP00000449639.1
 
Protein coding
F8VVA2 -TSL:4CDS 3' incomplete
ENST00000551468.1DDX23-211567138aaENSP00000446948.1
 
Protein coding
F8W1J5 -TSL:5CDS 3' incomplete
ENST00000703181.1DDX23-2223648619aaENSP00000515225.1
 
Nonsense mediated decay
A0A8V8TRI2 -CDS 5' incomplete
ENST00000552369.6DDX23-2133372184aaENSP00000515224.1
 
Nonsense mediated decay
A0A8V8TQQ5 -TSL:4
ENST00000703182.1DDX23-2232662435aaENSP00000515226.1
 
Nonsense mediated decay
A0A8V8TQ76 -CDS 5' incomplete
ENST00000547135.5DDX23-2021377108aaENSP00000446770.1
 
Nonsense mediated decay
Q9BUQ8-2 -TSL:2
ENST00000552802.5DDX23-216926152aaENSP00000448542.1
 
Nonsense mediated decay
H0YI52 -TSL:5CDS 5' incomplete
ENST00000703180.1DDX23-2213109No protein-
 
Protein coding CDS not defined
---
ENST00000703178.1DDX23-2191779No protein-
 
Protein coding CDS not defined
---
ENST00000553182.5DDX23-218779No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000552555.1DDX23-215562No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000549795.6DDX23-2063721No protein-
 
Retained intron
--TSL:2
ENST00000551098.6DDX23-2083452No protein-
 
Retained intron
--TSL:2
ENST00000547290.2DDX23-2042834No protein-
 
Retained intron
--TSL:2
ENST00000547165.5DDX23-203958No protein-
 
Retained intron
--TSL:5
ENST00000551331.1DDX23-210706No protein-
 
Retained intron
--TSL:2
ENST00000552069.1DDX23-212592No protein-
 
Retained intron
--TSL:3
ENST00000551189.1DDX23-209587No protein-
 
Retained intron
--TSL:4
ENST00000547842.1DDX23-205554No protein-
 
Retained intron
--TSL:4
ENST00000553065.1DDX23-217336No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,256 bps, Translation length: 820 residues

MANE

This MANE Select transcript contains ENSP00000310723 and matches to NM_004818.3 and NP_004809.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BUQ8

CCDS

This transcript is a member of the Human CCDS set: CCDS8770

Transcript Support Level (TSL)

TSL:1

Version

ENST00000308025.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.