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EnsemblEnsembl Home
Description

major histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]

Gene Synonyms

AS

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000412585.7HLA-B-2491536362aaENSP00000399168.2
 
Protein coding
CCDS34394E5FQ95 P01889 NM_005514.8MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:NA
ENST00000434333.1HLA-B-250863246aaENSP00000405931.1
 
Protein coding
-F6U0H7 -TSL:NACDS 3' incomplete
ENST00000640094.1HLA-B-25614749aaENSP00000491275.1
 
Protein coding
-A0A1W2PP29 -GENCODE basicTSL:NA
ENST00000474381.1HLA-B-2521139No protein-
 
Retained intron
---TSL:NA
ENST00000498007.1HLA-B-2551087No protein-
 
Retained intron
---TSL:NA
ENST00000497377.5HLA-B-254917No protein-
 
Retained intron
---TSL:NA
ENST00000481849.5HLA-B-253753No protein-
 
Retained intron
---TSL:NA
ENST00000463574.1HLA-B-251588No protein-
 
Retained intron
---TSL:NA
Description

lymphocyte antigen 86 [Source:HGNC Symbol;Acc:HGNC:16837]

Gene Synonyms

MD-1, dJ80N2.1

Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000230568.5LY86-201859162aaENSP00000230568.3
 
Protein coding
CCDS4498O95711 NM_004271.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000379953.6LY86-2021197162aaENSP00000369286.1
 
Protein coding
CCDS4498O95711 -GENCODE basicAPPRIS P1TSL:5
Description

von Hippel-Lindau tumor suppressor [Source:HGNC Symbol;Acc:HGNC:12687]

Gene Synonyms

VHL1

Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000256474.3VHL-2014414213aaENSP00000256474.3
 
Protein coding
CCDS2597P40337-1 NM_000551.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000345392.2VHL-2022696172aaENSP00000344757.2
 
Protein coding
CCDS2598P40337-2 -GENCODE basicTSL:1
ENST00000477538.1VHL-203958No protein-
 
Processed transcript
---TSL:1
Description

KRAS proto-oncogene, GTPase [Source:HGNC Symbol;Acc:HGNC:6407]

Gene Synonyms

K-Ras4B, KRAS1, KRAS2

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000311936.8KRAS-2025306188aaENSP00000308495.3
 
Protein coding
CCDS8702P01116-2 NM_004985.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000256078.10KRAS-2015430189aaENSP00000256078.5
 
Protein coding
CCDS8703P01116-1 -GENCODE basicAPPRIS P4TSL:1
ENST00000685328.1KRAS-2055287188aaENSP00000508921.1
 
Protein coding
CCDS8702A0A024RAV5 -GENCODE basicAPPRIS ALT1
ENST00000688940.1KRAS-2103630188aaENSP00000509238.1
 
Protein coding
CCDS8702A0A024RAV5 -GENCODE basicAPPRIS ALT1
ENST00000693229.1KRAS-2145187163aaENSP00000509223.1
 
Protein coding
---GENCODE basic
ENST00000692768.1KRAS-2135075122aaENSP00000510254.1
 
Protein coding
---GENCODE basic
ENST00000686969.1KRAS-207295743aaENSP00000510479.1
 
Protein coding
---GENCODE basic
ENST00000556131.2KRAS-203293743aaENSP00000451856.1
 
Protein coding
-G3V4K2 -GENCODE basicTSL:1
ENST00000557334.6KRAS-204104275aaENSP00000452512.1
 
Protein coding
-G3V5T7 -GENCODE basicTSL:5
ENST00000686877.1KRAS-206542055aaENSP00000510431.1
 
Nonsense mediated decay
----
ENST00000687356.1KRAS-208510140aaENSP00000510511.1
 
Nonsense mediated decay
----
ENST00000690406.1KRAS-211491954aaENSP00000509798.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000690804.1KRAS-212272151aaENSP00000508568.1
 
Nonsense mediated decay
----
ENST00000688228.1KRAS-2091163No protein-
 
Retained intron
----
Description

cathepsin F [Source:HGNC Symbol;Acc:HGNC:2531]

Gene Synonyms

CATSF, CLN13

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000310325.10CTSF-2012044484aaENSP00000310832.5
 
Protein coding
CCDS8144Q9UBX1 NM_003793.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000679347.1CTSF-2392139505aaENSP00000503676.1
 
Protein coding
-A0A7I2YQH8 -GENCODE basic
ENST00000677005.1CTSF-2122136504aaENSP00000503238.1
 
Protein coding
-A0A7I2V313 -GENCODE basic
ENST00000677587.1CTSF-2182086498aaENSP00000503791.1
 
Protein coding
-A0A7I2V411 -GENCODE basicAPPRIS ALT2
ENST00000679024.1CTSF-2352061479aaENSP00000503506.1
 
Protein coding
-A0A7I2V3M3 -GENCODE basic
ENST00000678872.1CTSF-2312036492aaENSP00000503425.1
 
Protein coding
-A0A7I2V3X1 -GENCODE basic
ENST00000677896.1CTSF-2212035481aaENSP00000504605.1
 
Protein coding
-A0A7I2V5Q1 -GENCODE basicAPPRIS ALT2
ENST00000678471.1CTSF-2282014483aaENSP00000502949.1
 
Protein coding
-A0A7I2V2K3 -GENCODE basicAPPRIS ALT2
ENST00000678305.1CTSF-2251971460aaENSP00000504383.1
 
Protein coding
-A0A7I2V5B9 -GENCODE basicAPPRIS ALT2
ENST00000679160.1CTSF-2361938459aaENSP00000503972.1
 
Protein coding
-A0A7I2V4A8 -GENCODE basicAPPRIS ALT2
ENST00000526010.2CTSF-2041873392aaENSP00000435822.2
 
Protein coding
-A0A024R5G9 -GENCODE basicAPPRIS ALT2TSL:4
ENST00000524994.6CTSF-2021709483aaENSP00000433082.2
 
Protein coding
-H0YD65 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000679314.1CTSF-2382598356aaENSP00000503465.1
 
Nonsense mediated decay
-A0A7I2V3E7 --
ENST00000676924.1CTSF-2112391325aaENSP00000503579.1
 
Nonsense mediated decay
-A0A7I2V3L9 --
ENST00000678710.1CTSF-2302310407aaENSP00000504254.1
 
Nonsense mediated decay
-A0A7I2V5F8 --
ENST00000677526.1CTSF-2172045312aaENSP00000504693.1
 
Nonsense mediated decay
-A0A7I2YQW3 --
ENST00000677920.1CTSF-2221994262aaENSP00000503614.1
 
Nonsense mediated decay
-A0A7I2V3V9 --
ENST00000678154.1CTSF-2231986109aaENSP00000502935.1
 
Nonsense mediated decay
-A0A7I2YQ73 --
ENST00000678413.1CTSF-2271934266aaENSP00000503232.1
 
Nonsense mediated decay
-A0A7I2YQB3 --
ENST00000678953.1CTSF-2331534118aaENSP00000504169.1
 
Nonsense mediated decay
-A0A7I2V4V5 --
ENST00000679011.1CTSF-2341475312aaENSP00000503980.1
 
Nonsense mediated decay
-A0A7I2YQW3 --
ENST00000525733.6CTSF-2031439267aaENSP00000434936.2
 
Nonsense mediated decay
-H0YE42 -TSL:3
ENST00000677779.1CTSF-2201750No protein-
 
Processed transcript
----
ENST00000677186.1CTSF-2141397No protein-
 
Processed transcript
----
ENST00000678383.1CTSF-2263019No protein-
 
Retained intron
----
ENST00000530565.6CTSF-2082940No protein-
 
Retained intron
---TSL:5
ENST00000677298.1CTSF-2152738No protein-
 
Retained intron
----
ENST00000678294.1CTSF-2242451No protein-
 
Retained intron
----
ENST00000677365.1CTSF-2162446No protein-
 
Retained intron
----
ENST00000678614.1CTSF-2292407No protein-
 
Retained intron
----
ENST00000678946.1CTSF-2322336No protein-
 
Retained intron
----
ENST00000676860.1CTSF-2102262No protein-
 
Retained intron
----
ENST00000527141.6CTSF-2052207No protein-
 
Retained intron
---TSL:2
ENST00000677020.1CTSF-2131941No protein-
 
Retained intron
----
ENST00000533168.2CTSF-2091806No protein-
 
Retained intron
---TSL:2
ENST00000679225.1CTSF-2371773No protein-
 
Retained intron
----
ENST00000677678.1CTSF-2191681No protein-
 
Retained intron
----
ENST00000529199.1CTSF-206578No protein-
 
Retained intron
---TSL:4
ENST00000529561.6CTSF-207569No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 10, Coding exons: 0, Transcript length: 3,019 bps,

Version

ENST00000678383.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x292a0bc0)