Human (GRCh38.p14)
Description

cathepsin F [Source:HGNC Symbol;Acc:HGNC:2531]

Gene Synonyms

CATSF, CLN13

Location
About this transcript

This transcript has 13 exons, is annotated with 20 domains and features, is associated with 2860 variant alleles and maps to 422 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000310325.10CTSF-2012044484aaENSP00000310832.5
 
Protein coding
CCDS8144Q9UBX1 NM_003793.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000679347.1CTSF-2392139505aaENSP00000503676.1
 
Protein coding
A0A7I2YQH8 -GENCODE basic
ENST00000677005.1CTSF-2122136504aaENSP00000503238.1
 
Protein coding
A0A7I2V313 -GENCODE basic
ENST00000677587.1CTSF-2182086498aaENSP00000503791.1
 
Protein coding
A0A7I2V411 -GENCODE basicAPPRIS ALT2
ENST00000679024.1CTSF-2352061479aaENSP00000503506.1
 
Protein coding
A0A7I2V3M3 -GENCODE basic
ENST00000678872.1CTSF-2312036492aaENSP00000503425.1
 
Protein coding
A0A7I2V3X1 -GENCODE basic
ENST00000677896.1CTSF-2212035481aaENSP00000504605.1
 
Protein coding
A0A7I2V5Q1 -GENCODE basicAPPRIS ALT2
ENST00000678471.1CTSF-2282014483aaENSP00000502949.1
 
Protein coding
A0A7I2V2K3 -GENCODE basicAPPRIS ALT2
ENST00000678305.1CTSF-2251971460aaENSP00000504383.1
 
Protein coding
A0A7I2V5B9 -GENCODE basicAPPRIS ALT2
ENST00000679160.1CTSF-2361938459aaENSP00000503972.1
 
Protein coding
A0A7I2V4A8 -GENCODE basicAPPRIS ALT2
ENST00000526010.2CTSF-2041873392aaENSP00000435822.2
 
Protein coding
A0A024R5G9 -GENCODE basicAPPRIS ALT2TSL:4
ENST00000524994.6CTSF-2021709483aaENSP00000433082.2
 
Protein coding
H0YD65 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000679314.1CTSF-2382598356aaENSP00000503465.1
 
Nonsense mediated decay
A0A7I2V3E7 --
ENST00000676924.1CTSF-2112391325aaENSP00000503579.1
 
Nonsense mediated decay
A0A7I2V3L9 --
ENST00000678710.1CTSF-2302310407aaENSP00000504254.1
 
Nonsense mediated decay
A0A7I2V5F8 --
ENST00000677526.1CTSF-2172045312aaENSP00000504693.1
 
Nonsense mediated decay
A0A7I2YQW3 --
ENST00000677920.1CTSF-2221994262aaENSP00000503614.1
 
Nonsense mediated decay
A0A7I2V3V9 --
ENST00000678154.1CTSF-2231986109aaENSP00000502935.1
 
Nonsense mediated decay
A0A7I2YQ73 --
ENST00000678413.1CTSF-2271934266aaENSP00000503232.1
 
Nonsense mediated decay
A0A7I2YQB3 --
ENST00000678953.1CTSF-2331534118aaENSP00000504169.1
 
Nonsense mediated decay
A0A7I2V4V5 --
ENST00000679011.1CTSF-2341475312aaENSP00000503980.1
 
Nonsense mediated decay
A0A7I2YQW3 --
ENST00000525733.6CTSF-2031439267aaENSP00000434936.2
 
Nonsense mediated decay
H0YE42 -TSL:3
ENST00000677779.1CTSF-2201750No protein-
 
Protein coding CDS not defined
---
ENST00000677186.1CTSF-2141397No protein-
 
Protein coding CDS not defined
---
ENST00000678383.1CTSF-2263019No protein-
 
Retained intron
---
ENST00000530565.6CTSF-2082940No protein-
 
Retained intron
--TSL:5
ENST00000677298.1CTSF-2152738No protein-
 
Retained intron
---
ENST00000678294.1CTSF-2242451No protein-
 
Retained intron
---
ENST00000677365.1CTSF-2162446No protein-
 
Retained intron
---
ENST00000678614.1CTSF-2292407No protein-
 
Retained intron
---
ENST00000678946.1CTSF-2322336No protein-
 
Retained intron
---
ENST00000676860.1CTSF-2102262No protein-
 
Retained intron
---
ENST00000527141.6CTSF-2052207No protein-
 
Retained intron
--TSL:2
ENST00000677020.1CTSF-2131941No protein-
 
Retained intron
---
ENST00000533168.2CTSF-2091806No protein-
 
Retained intron
--TSL:2
ENST00000679225.1CTSF-2371773No protein-
 
Retained intron
---
ENST00000677678.1CTSF-2191681No protein-
 
Retained intron
---
ENST00000529199.1CTSF-206578No protein-
 
Retained intron
--TSL:4
ENST00000529561.6CTSF-207569No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,044 bps, Translation length: 484 residues

MANE

This MANE Select transcript contains ENSP00000310832 and matches to NM_003793.4 and NP_003784.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UBX1

CCDS

This transcript is a member of the Human CCDS set: CCDS8144

Transcript Support Level (TSL)

TSL:1

Version

ENST00000310325.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.