Human (GRCh38.p14)
Description

chromodomain helicase DNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:1918]

Gene Synonyms

MI-2A, MI2-ALPHA, ZFH

Location
About this transcript

This transcript has 40 exons, is annotated with 90 domains and features, is associated with 11165 variant alleles and maps to 1078 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000330494.12CHD3-20173852000aaENSP00000332628.7
 
Protein coding
CCDS32554Q12873-1 NM_001005273.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000700753.1CHD3-22373882114aaENSP00000515165.1
 
Protein coding
A0A8V8TR54 -GENCODE basic
ENST00000380358.9CHD3-20373612059aaENSP00000369716.4
 
Protein coding
CCDS32553Q12873-3 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000358181.8CHD3-20272861966aaENSP00000350907.4
 
Protein coding
CCDS32555Q12873-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000672838.1CHD3-22043761357aaENSP00000500734.1
 
Protein coding
A0A5F9ZHX5 -CDS 3' incomplete
ENST00000452447.1CHD3-2061573525aaENSP00000405861.1
 
Protein coding
H7C2H0 -TSL:5CDS 5' and 3' incomplete
ENST00000439235.5CHD3-2041263383aaENSP00000395252.1
 
Protein coding
H7C0J3 -TSL:5CDS 5' incomplete
ENST00000672274.1CHD3-2191105188aaENSP00000500513.1
 
Protein coding
A0A5F9ZHM2 -CDS 3' incomplete
ENST00000449744.1CHD3-205880277aaENSP00000411959.1
 
Protein coding
H7C3H7 -TSL:2CDS 5' incomplete
ENST00000573936.5CHD3-216749249aaENSP00000459321.1
 
Protein coding
I3L229 -TSL:3CDS 5' and 3' incomplete
ENST00000571249.1CHD3-213330110aaENSP00000458861.1
 
Protein coding
I3L1I4 -TSL:3CDS 5' and 3' incomplete
ENST00000470531.5CHD3-208374463aaENSP00000467547.1
 
Nonsense mediated decay
K7EPV1 -TSL:2CDS 5' incomplete
ENST00000671866.1CHD3-218197No protein-
 
Protein coding CDS not defined
---
ENST00000570758.1CHD3-212174No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000574022.1CHD3-217103No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000682063.1CHD3-2214332No protein-
 
Retained intron
---
ENST00000481999.1CHD3-2112515No protein-
 
Retained intron
--TSL:2
ENST00000682344.1CHD3-2221975No protein-
 
Retained intron
---
ENST00000572579.1CHD3-214931No protein-
 
Retained intron
--TSL:2
ENST00000572750.1CHD3-215750No protein-
 
Retained intron
--TSL:3
ENST00000466233.1CHD3-207648No protein-
 
Retained intron
--TSL:4
ENST00000473376.1CHD3-209562No protein-
 
Retained intron
--TSL:2
ENST00000479080.1CHD3-210519No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 40, Coding exons: 40, Transcript length: 7,385 bps, Translation length: 2,000 residues

MANE

This MANE Select transcript contains ENSP00000332628 and matches to NM_001005273.3 and NP_001005273.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12873

CCDS

This transcript is a member of the Human CCDS set: CCDS32554

Transcript Support Level (TSL)

TSL:1

Version

ENST00000330494.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.