Human (GRCh38.p14)
Description

UPF3A regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]

Gene Synonyms

HUPF3A, RENT3A, UPF3

About this transcript

This transcript has 8 exons, is associated with 10948 variant alleles and maps to 445 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000375299.8UPF3A-2022370476aaENSP00000364448.3
 
Protein coding
CCDS9543Q9H1J1-1 NM_023011.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000351487.5UPF3A-2012235443aaENSP00000329592.5
 
Protein coding
CCDS9544Q9H1J1-2 -GENCODE basicTSL:1
ENST00000492270.1UPF3A-209494105aaENSP00000482320.1
 
Protein coding
A0A087WZ33 -GENCODE basicTSL:2
ENST00000475218.2UPF3A-2041791No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000480362.5UPF3A-206965No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000493727.5UPF3A-210937No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000474056.5UPF3A-203748No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000484246.5UPF3A-208699No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000481131.5UPF3A-207678No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000479712.1UPF3A-205423No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000619079.1UPF3A-2122423No protein-
 
Retained intron
--TSL:2
ENST00000618700.4UPF3A-2111210No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 8, Coding exons: 0, Transcript length: 937 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000493727.5

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.