Human (GRCh38.p14)
Description

ubiquitin specific peptidase 39 [Source:HGNC Symbol;Acc:HGNC:20071]

Gene Synonyms

CGI-21, SAD1, SNRNP65

Location
About this transcript

This transcript has 13 exons, is annotated with 21 domains and features, is associated with 15461 variant alleles and maps to 582 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000323701.11USP39-2012183565aaENSP00000312981.6
 
Protein coding
CCDS33234Q53GS9-1 NM_006590.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000613444.4USP39-2202161487aaENSP00000484024.1
 
Protein coding
CCDS74534A0A087X1B2 -GENCODE basicTSL:2
ENST00000450066.6USP39-2072086462aaENSP00000396133.2
 
Protein coding
CCDS58716Q53GS9-2 -GENCODE basicTSL:2
ENST00000409470.5USP39-2032034565aaENSP00000386864.1
 
Protein coding
CCDS33234Q53GS9-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000409766.7USP39-2042033488aaENSP00000386803.3
 
Protein coding
CCDS58717Q53GS9-3 -GENCODE basicTSL:2
ENST00000409025.5USP39-2021946536aaENSP00000386572.1
 
Protein coding
B9A018 -GENCODE basicTSL:5
ENST00000448971.5USP39-206610129aaENSP00000396854.1
 
Protein coding
C9JIU2 -TSL:3CDS 3' incomplete
ENST00000442708.5USP39-205561113aaENSP00000392911.1
 
Protein coding
C9J0X5 -TSL:4CDS 3' incomplete
ENST00000458268.5USP39-209751154aaENSP00000400690.1
 
Nonsense mediated decay
F8WC91 -TSL:4
ENST00000467885.6USP39-21333861aaENSP00000479885.1
 
Nonsense mediated decay
A0A087WW31 -TSL:5CDS 5' incomplete
ENST00000459775.5USP39-2102148No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000490193.5USP39-2161028No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000465514.1USP39-212660No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000491659.5USP39-217648No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000455732.5USP39-208623No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000465282.5USP39-211568No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000496047.5USP39-219554No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000481409.1USP39-215447No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000474572.6USP39-214293No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000493829.5USP39-2181660No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,183 bps, Translation length: 565 residues

MANE

This MANE Select transcript contains ENSP00000312981 and matches to NM_006590.4 and NP_006581.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q53GS9

CCDS

This transcript is a member of the Human CCDS set: CCDS33234

Transcript Support Level (TSL)

TSL:1

Version

ENST00000323701.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.