Human (GRCh38.p14)
Description

sodium voltage-gated channel alpha subunit 11 [Source:HGNC Symbol;Acc:HGNC:10583]

Gene Synonyms

NAN, NAV1.9, SCN12A, SNS-2

Location
About this transcript

This transcript has 30 exons, is annotated with 54 domains and features, is associated with 84345 variant alleles and maps to 806 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000302328.9SCN11A-20167931791aaENSP00000307599.3
 
Protein coding
CCDS33737Q9UI33-1 NM_001349253.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
ENST00000668754.1SCN11A-20572851791aaENSP00000499569.1
 
Protein coding
CCDS33737Q9UI33-1 -GENCODE basicAPPRIS ALT2
ENST00000444237.2SCN11A-20257291444aaENSP00000408028.2
 
Protein coding
Q9UI33-2 -GENCODE basicTSL:5
ENST00000456224.7SCN11A-20352621753aaENSP00000416757.3
 
Protein coding
Q9UI33-3 -GENCODE basicAPPRIS P4TSL:5
ENST00000675892.1SCN11A-21151961731aaENSP00000502318.1
 
Protein coding
A0A6Q8PGN4 -GENCODE basic
ENST00000676176.1SCN11A-21349951664aaENSP00000501891.1
 
Protein coding
A0A6Q8PFM8 -GENCODE basic
ENST00000675223.1SCN11A-20854551444aaENSP00000502481.1
 
Nonsense mediated decay
A0A6Q8PGY3 --
ENST00000675672.1SCN11A-2105430960aaENSP00000502446.1
 
Nonsense mediated decay
A0A6Q8PGY6 --
ENST00000676045.1SCN11A-2125420108aaENSP00000501685.1
 
Nonsense mediated decay
A0A6Q8PF78 --
ENST00000675269.1SCN11A-2091188No protein-
 
Protein coding CDS not defined
---
ENST00000674979.1SCN11A-207560No protein-
 
Protein coding CDS not defined
---
ENST00000676333.1SCN11A-214481No protein-
 
Protein coding CDS not defined
---
ENST00000665106.1SCN11A-2042614No protein-
 
Retained intron
---
ENST00000674755.1SCN11A-206688No protein-
 
Retained intron
---
Statistics

Exons: 30, Coding exons: 26, Transcript length: 6,793 bps, Translation length: 1,791 residues

MANE

This MANE Select transcript contains ENSP00000307599 and matches to NM_001349253.2 and NP_001336182.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UI33

CCDS

This transcript is a member of the Human CCDS set: CCDS33737

Transcript Support Level (TSL)

TSL:5

Version

ENST00000302328.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.