Human (GRCh38.p14)
Description

recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]

Gene Synonyms

CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJK, RBPSUH, SUH

Location
About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 47118 variant alleles and maps to 562 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000355476.8RBPJ-2055395487aaENSP00000347659.4
 
Protein coding
CCDS43219Q06330-7 NM_015874.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000342320.8RBPJ-2025761486aaENSP00000340124.4
 
Protein coding
CCDS33969Q06330-6 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000681484.1RBPJ-2442169465aaENSP00000505636.1
 
Protein coding
CCDS87214Q06330-5 -GENCODE basic
ENST00000505958.6RBPJ-2112136486aaENSP00000426872.2
 
Protein coding
CCDS33969Q06330-6 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000680511.1RBPJ-2372106434aaENSP00000506628.1
 
Protein coding
A0A7P0TBJ4 -CDS 3' incomplete
ENST00000681093.1RBPJ-2402100486aaENSP00000504964.1
 
Protein coding
CCDS33969Q06330-6 -GENCODE basicAPPRIS ALT1
ENST00000348160.9RBPJ-2041998486aaENSP00000339699.5
 
Protein coding
CCDS33969Q06330-6 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000342295.6RBPJ-2011992500aaENSP00000345206.1
 
Protein coding
CCDS3437Q06330-1 -GENCODE basicTSL:5
ENST00000680928.1RBPJ-2381850486aaENSP00000505493.1
 
Protein coding
CCDS33969Q06330-6 -GENCODE basicAPPRIS ALT1
ENST00000512671.6RBPJ-2231843500aaENSP00000423644.2
 
Protein coding
CCDS3437Q06330-1 -GENCODE basicTSL:2
ENST00000681260.1RBPJ-2411737463aaENSP00000505479.1
 
Protein coding
A0A7P0T947 -CDS 3' incomplete
ENST00000681856.1RBPJ-2481706457aaENSP00000505922.1
 
Protein coding
A0A7P0T9Y9 -CDS 3' incomplete
ENST00000361572.10RBPJ-2061697500aaENSP00000354528.6
 
Protein coding
CCDS3437Q06330-1 -GENCODE basicTSL:1
ENST00000507561.5RBPJ-2141689465aaENSP00000423907.1
 
Protein coding
CCDS87214Q06330-5 -GENCODE basicTSL:1
ENST00000680140.1RBPJ-2341685440aaENSP00000506443.1
 
Protein coding
A0A7P0Z4N7 -GENCODE basic
ENST00000345843.8RBPJ-2031682465aaENSP00000305815.6
 
Protein coding
CCDS87214Q06330-5 -GENCODE basicTSL:1
ENST00000504907.5RBPJ-2081682382aaENSP00000423703.1
 
Protein coding
D6R927 -GENCODE basicTSL:5
ENST00000509158.6RBPJ-2161678434aaENSP00000424804.2
 
Protein coding
D6RF98 -GENCODE basicTSL:2
ENST00000681264.1RBPJ-2421675465aaENSP00000505255.1
 
Protein coding
CCDS87214Q06330-5 -GENCODE basic
ENST00000504423.2RBPJ-2071621465aaENSP00000421804.2
 
Protein coding
CCDS87214Q06330-5 -GENCODE basicTSL:5
ENST00000504938.1RBPJ-209731143aaENSP00000424459.1
 
Protein coding
D6RB37 -TSL:3CDS 3' incomplete
ENST00000515573.5RBPJ-231698189aaENSP00000423406.1
 
Protein coding
D6RA45 -TSL:5CDS 3' incomplete
ENST00000512351.5RBPJ-22260994aaENSP00000424789.1
 
Protein coding
D6RAT2 -TSL:4CDS 3' incomplete
ENST00000507574.5RBPJ-215607157aaENSP00000422617.1
 
Protein coding
D6RBQ8 -TSL:5CDS 3' incomplete
ENST00000514675.5RBPJ-227578110aaENSP00000423575.1
 
Protein coding
D6R9K5 -TSL:5CDS 3' incomplete
ENST00000511546.5RBPJ-221572107aaENSP00000422838.1
 
Protein coding
D6R9X3 -TSL:5CDS 3' incomplete
ENST00000514730.5RBPJ-228569113aaENSP00000425061.1
 
Protein coding
D6REC2 -TSL:5CDS 3' incomplete
ENST00000506956.5RBPJ-21356697aaENSP00000425750.1
 
Protein coding
D6RIZ8 -TSL:4CDS 3' incomplete
ENST00000514807.5RBPJ-22934048aaENSP00000424989.1
 
Protein coding
D6REP3 -TSL:3CDS 3' incomplete
ENST00000681506.1RBPJ-245188960aaENSP00000504925.1
 
Nonsense mediated decay
A0A7P0T821 --
ENST00000679698.1RBPJ-233187860aaENSP00000506331.1
 
Nonsense mediated decay
A0A7P0T821 --
ENST00000681679.1RBPJ-2461766184aaENSP00000505870.1
 
Nonsense mediated decay
A0A7P0T9W9 --
ENST00000679469.1RBPJ-2321657105aaENSP00000504953.1
 
Nonsense mediated decay
A0A7P0T806 --
ENST00000681025.1RBPJ-239163759aaENSP00000504979.1
 
Nonsense mediated decay
A0A7P0T848 --
ENST00000681799.1RBPJ-247153458aaENSP00000504876.1
 
Nonsense mediated decay
A0A7P0T7Z3 --
ENST00000680204.1RBPJ-235130752aaENSP00000506010.1
 
Nonsense mediated decay
A0A7P0TA33 --
ENST00000510778.7RBPJ-2181198185aaENSP00000427170.3
 
Nonsense mediated decay
D6RCM1 -TSL:5
ENST00000680210.1RBPJ-236119161aaENSP00000505411.1
 
Nonsense mediated decay
A0A7P0T964 --
ENST00000513182.5RBPJ-22453753aaENSP00000427344.1
 
Nonsense mediated decay
D6RIV8 -TSL:4
ENST00000515023.6RBPJ-2301476No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000511401.5RBPJ-219577No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000514656.3RBPJ-226455No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000689192.1RBPJ-2495297No protein-
 
Retained intron
---
ENST00000691085.1RBPJ-2505281No protein-
 
Retained intron
---
ENST00000692303.1RBPJ-2513067No protein-
 
Retained intron
---
ENST00000681403.1RBPJ-2431671No protein-
 
Retained intron
---
ENST00000514380.5RBPJ-2251519No protein-
 
Retained intron
--TSL:2
ENST00000505727.1RBPJ-210860No protein-
 
Retained intron
--TSL:2
ENST00000511451.5RBPJ-220742No protein-
 
Retained intron
--TSL:2
ENST00000506903.1RBPJ-212658No protein-
 
Retained intron
--TSL:3
ENST00000510725.1RBPJ-217546No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,682 bps, Translation length: 465 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06330

CCDS

This transcript is a member of the Human CCDS set: CCDS87214

Transcript Support Level (TSL)

TSL:1

Version

ENST00000345843.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

upstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.