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EnsemblEnsembl Home
Description

MIR9-1 host gene [Source:HGNC Symbol;Acc:HGNC:30780]

Gene Synonyms

C1orf61, CROC4

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
MIR9-1HG-232ENST00000673141.11395No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
MIR9-1HG-220ENST00000488498.24774No protein-
 
lncRNA
--TSL:NA
MIR9-1HG-228ENST00000608007.13138No protein-
 
lncRNA
--GENCODE basicTSL:1
MIR9-1HG-216ENST00000476966.52697No protein-
 
lncRNA
--GENCODE basicTSL:2
MIR9-1HG-208ENST00000462458.51987No protein-
 
lncRNA
--GENCODE basicTSL:1
MIR9-1HG-214ENST00000469813.11575No protein-
 
lncRNA
--GENCODE basicTSL:1
MIR9-1HG-224ENST00000495000.11091No protein-
 
lncRNA
--GENCODE basicTSL:2
MIR9-1HG-204ENST00000368243.6920No protein-
 
lncRNA
--GENCODE basicTSL:1
MIR9-1HG-203ENST00000368242.7867No protein-
 
lncRNA
--TSL:3
MIR9-1HG-207ENST00000452465.2857No protein-
 
lncRNA
--GENCODE basicTSL:3
MIR9-1HG-217ENST00000482932.5826No protein-
 
lncRNA
--GENCODE basicTSL:5
MIR9-1HG-229ENST00000656222.1788No protein-
 
lncRNA
--GENCODE basic
MIR9-1HG-231ENST00000667036.1781No protein-
 
lncRNA
--GENCODE basic
MIR9-1HG-230ENST00000663987.1780No protein-
 
lncRNA
--GENCODE basic
MIR9-1HG-210ENST00000464203.1766No protein-
 
lncRNA
--TSL:5
MIR9-1HG-215ENST00000471156.5764No protein-
 
lncRNA
--TSL:5
MIR9-1HG-219ENST00000486517.5726No protein-
 
lncRNA
--GENCODE basicTSL:3
MIR9-1HG-206ENST00000441085.6726No protein-
 
lncRNA
--TSL:2
MIR9-1HG-226ENST00000497824.5725No protein-
 
lncRNA
--TSL:1
MIR9-1HG-201ENST00000310027.9688No protein-
 
lncRNA
--TSL:1
MIR9-1HG-209ENST00000463309.5685No protein-
 
lncRNA
--TSL:3
MIR9-1HG-202ENST00000357975.4652No protein-
 
lncRNA
--TSL:3
MIR9-1HG-227ENST00000498346.1588No protein-
 
lncRNA
--TSL:2
MIR9-1HG-218ENST00000484428.5578No protein-
 
lncRNA
--TSL:3
MIR9-1HG-212ENST00000465270.5543No protein-
 
lncRNA
--TSL:2
MIR9-1HG-225ENST00000497822.5542No protein-
 
lncRNA
--TSL:2
MIR9-1HG-221ENST00000489877.5536No protein-
 
lncRNA
--GENCODE basicTSL:5
MIR9-1HG-213ENST00000465570.1528No protein-
 
lncRNA
--TSL:2
MIR9-1HG-223ENST00000492750.5475No protein-
 
lncRNA
--TSL:5
MIR9-1HG-205ENST00000400991.6473No protein-
 
lncRNA
--TSL:1
MIR9-1HG-222ENST00000489918.1427No protein-
 
lncRNA
--TSL:3
MIR9-1HG-211ENST00000464238.5412No protein-
 
lncRNA
--TSL:2
Description

spectrin repeat containing nuclear envelope protein 1 [Source:HGNC Symbol;Acc:HGNC:17089]

Gene Synonyms

8B, ARCA1, C6orf98, CPG2, KIAA0796, MYNE1, Nesp1, Nesprin-1, SCAR8, SYNE-1B, dJ45H2.2, enaptin

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SYNE1-206ENST00000367255.10277088797aaENSP00000356224.5
 
Protein coding
CCDS5236Q8NF91-1 NM_182961.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
SYNE1-211ENST00000423061.6274758749aaENSP00000396024.1
 
Protein coding
CCDS5235A0A0C4DG40 -GENCODE basicAPPRIS ALT2TSL:1
SYNE1-202ENST00000354674.53785975aaENSP00000346701.4
 
Protein coding
CCDS87458F8WAI0 NM_001347702.2MANE Plus Clinical v0.93GENCODE basicTSL:5
SYNE1-203ENST00000367248.771651433aaENSP00000356217.3
 
Protein coding
-F5GXQ8 -GENCODE basicTSL:5
SYNE1-241ENST00000672122.166601424aaENSP00000500559.1
 
Protein coding
-A0A5F9ZHR3 -GENCODE basic
SYNE1-204ENST00000367251.758371654aaENSP00000356220.3
 
Protein coding
-H0Y325 -TSL:1CDS 5' incomplete
SYNE1-205ENST00000367253.851891725aaENSP00000356222.4
 
Protein coding
-Q8NF91-6 -GENCODE basicTSL:5
SYNE1-208ENST00000367257.850221355aaENSP00000356226.4
 
Protein coding
-H0Y326 -TSL:5CDS 5' incomplete
SYNE1-210ENST00000413186.648601443aaENSP00000414510.2
 
Protein coding
-Q8NF91-5 -GENCODE basicTSL:5
SYNE1-246ENST00000673281.147701528aaENSP00000500893.1
 
Protein coding
-A0A5F9ZI52 -CDS 3' incomplete
SYNE1-240ENST00000671915.13779542aaENSP00000500319.1
 
Protein coding
-A0A5F9ZHI3 -CDS 5' incomplete
SYNE1-236ENST00000539504.53768952aaENSP00000441052.1
 
Protein coding
-Q5JV20 -GENCODE basicTSL:5
SYNE1-235ENST00000537750.52850615aaENSP00000441264.1
 
Protein coding
-F5GYQ7 -TSL:5CDS 3' incomplete
SYNE1-232ENST00000535896.72802752aaENSP00000500235.1
 
Protein coding
-A0A5F9ZHD7 -GENCODE basicTSL:5
SYNE1-243ENST00000672169.12789635aaENSP00000500287.1
 
Protein coding
-A0A5F9ZHE1 -CDS 5' incomplete
SYNE1-239ENST00000610489.22688494aaENSP00000481873.2
 
Protein coding
-A0A087WYJ5 I6XKI8 -GENCODE basicTSL:5
SYNE1-245ENST00000673173.12663591aaENSP00000500180.1
 
Protein coding
-A0A5F9ZHB2 -CDS 5' incomplete
SYNE1-216ENST00000466159.62610754aaENSP00000446021.1
 
Protein coding
-F5H4Q0 -GENCODE basicTSL:1
SYNE1-242ENST00000672154.12350510aaENSP00000500128.1
 
Protein coding
-A0A5F9ZH86 -CDS 5' incomplete
SYNE1-229ENST00000495090.61907612aaENSP00000438508.1
 
Protein coding
-F5H422 -GENCODE basicTSL:1
SYNE1-213ENST00000454018.71549511aaENSP00000390858.4
 
Protein coding
-A0A0C4DH48 -TSL:1CDS 5' incomplete
SYNE1-237ENST00000540663.5776242aaENSP00000437411.1
 
Protein coding
-F5H6R8 -TSL:4CDS 3' incomplete
SYNE1-234ENST00000537033.1647195aaENSP00000443879.1
 
Protein coding
-F5GZ83 -TSL:4CDS 3' incomplete
SYNE1-218ENST00000469439.1630207aaENSP00000442805.1
 
Protein coding
-H0YGD3 -TSL:3CDS 5' incomplete
SYNE1-244ENST00000673163.1552836aaENSP00000499934.1
 
Nonsense mediated decay
-A0A5F9ZH00 --
SYNE1-247ENST00000673451.12851542aaENSP00000500189.1
 
Nonsense mediated decay
-A0A5F9ZH87 -CDS 5' incomplete
SYNE1-221ENST00000474655.6179862aaENSP00000440193.1
 
Nonsense mediated decay
-H0YFT4 -TSL:1CDS 5' incomplete
SYNE1-201ENST00000347037.93798No protein-
 
Processed transcript
---TSL:1
SYNE1-214ENST00000460912.63664No protein-
 
Processed transcript
---TSL:1
SYNE1-233ENST00000536990.53003No protein-
 
Processed transcript
---TSL:2
SYNE1-224ENST00000481502.5585No protein-
 
Processed transcript
---TSL:3
SYNE1-222ENST00000476519.1582No protein-
 
Processed transcript
---TSL:4
SYNE1-230ENST00000498751.1578No protein-
 
Processed transcript
---TSL:4
SYNE1-207ENST00000367256.910742No protein-
 
Retained intron
---TSL:1
SYNE1-209ENST00000409694.610634No protein-
 
Retained intron
---TSL:1
SYNE1-215ENST00000461872.610075No protein-
 
Retained intron
---TSL:1
SYNE1-223ENST00000478916.57780No protein-
 
Retained intron
---TSL:2
SYNE1-219ENST00000471834.17229No protein-
 
Retained intron
---TSL:1
SYNE1-227ENST00000490135.65707No protein-
 
Retained intron
---TSL:1
SYNE1-226ENST00000489156.11891No protein-
 
Retained intron
---TSL:1
SYNE1-251ENST00000684643.11629No protein-
 
Retained intron
----
SYNE1-250ENST00000684208.11540No protein-
 
Retained intron
----
SYNE1-249ENST00000682252.11540No protein-
 
Retained intron
----
SYNE1-212ENST00000448038.31275No protein-
 
Retained intron
---TSL:5
SYNE1-248ENST00000682179.1868No protein-
 
Retained intron
----
SYNE1-217ENST00000468937.2688No protein-
 
Retained intron
---TSL:2
SYNE1-228ENST00000490866.2581No protein-
 
Retained intron
---TSL:2
SYNE1-231ENST00000535081.1561No protein-
 
Retained intron
---TSL:2
SYNE1-238ENST00000545694.1526No protein-
 
Retained intron
---TSL:3
SYNE1-220ENST00000472563.2525No protein-
 
Retained intron
---TSL:2
SYNE1-225ENST00000488376.2414No protein-
 
Retained intron
---TSL:2
Description

oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]

Gene Synonyms

KIAA0704, ORP-3, ORP3, OSBP3

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
OSBPL3-201ENST00000313367.76749887aaENSP00000315410.2
 
Protein coding
CCDS5390Q9H4L5-1 NM_015550.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
OSBPL3-203ENST00000396431.52969856aaENSP00000379708.1
 
Protein coding
CCDS5391Q9H4L5-2 -GENCODE basicTSL:1
OSBPL3-202ENST00000396429.52707851aaENSP00000379706.1
 
Protein coding
CCDS5392Q9H4L5-3 -GENCODE basicAPPRIS ALT1TSL:1
OSBPL3-204ENST00000409069.52614820aaENSP00000386953.1
 
Protein coding
CCDS47564Q9H4L5-4 -GENCODE basicTSL:1
OSBPL3-210ENST00000415952.156861aaENSP00000411249.1
 
Protein coding
-C9J8P4 -TSL:4CDS 3' incomplete
OSBPL3-211ENST00000441059.554089aaENSP00000403374.1
 
Protein coding
-C9JEF2 -TSL:4CDS 3' incomplete
OSBPL3-209ENST00000415162.5534112aaENSP00000407829.1
 
Protein coding
-C9JZ19 -TSL:4CDS 3' incomplete
OSBPL3-208ENST00000409863.53490611aaENSP00000386429.1
 
Nonsense mediated decay
-Q9H4L5-6 -TSL:1
OSBPL3-205ENST00000409452.53344642aaENSP00000386801.1
 
Nonsense mediated decay
-Q9H4L5-5 -TSL:1
OSBPL3-207ENST00000409759.53219606aaENSP00000386325.1
 
Nonsense mediated decay
-Q9H4L5-7 -TSL:5
OSBPL3-206ENST00000409555.53088575aaENSP00000386990.1
 
Nonsense mediated decay
-Q9H4L5-8 -TSL:5
OSBPL3-214ENST00000487020.5554No protein-
 
Processed transcript
---TSL:3
OSBPL3-212ENST00000459987.1636No protein-
 
Retained intron
---TSL:2
OSBPL3-213ENST00000461835.1306No protein-
 
Retained intron
---TSL:2
Description

maestro heat like repeat family member 8 [Source:HGNC Symbol;Acc:HGNC:16125]

Gene Synonyms

C20orf131, C20orf132, dJ621N11.3, dJ621N11.4

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
MROH8-203ENST00000417458.52227670aaENSP00000415930.1
 
Protein coding
-H0Y7Y5 -Ensembl CanonicalGENCODE basicAPPRIS P5TSL:1CDS 5' incomplete
MROH8-205ENST00000422138.167524aaENSP00000400468.1
 
Protein coding
-Q5JYQ9 -APPRIS ALT2TSL:3CDS 3' incomplete
MROH8-201ENST00000343811.93414No protein-
 
Processed transcript
---TSL:1
MROH8-202ENST00000400440.62088No protein-
 
Processed transcript
---TSL:1
MROH8-204ENST00000421643.12000No protein-
 
Processed transcript
---TSL:2
MROH8-206ENST00000434295.5531No protein-
 
Processed transcript
---TSL:3
MROH8-207ENST00000466091.1471No protein-
 
Processed transcript
---TSL:2
Description

signal-induced proliferation-associated 1 like 3 [Source:MGI Symbol;Acc:MGI:1921456]

Gene Synonyms

2610511M17Rik

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Sipa1l3-215ENSMUST00000183096.877131776aaENSMUSP00000138171.2
 
Protein coding
CCDS39871G3X9J0 GENCODE basicAPPRIS P1TSL:5
Sipa1l3-201ENSMUST00000085809.1177131776aaENSMUSP00000082965.5
 
Protein coding
CCDS39871G3X9J0 GENCODE basicAPPRIS P1TSL:5
Sipa1l3-218ENSMUST00000183330.84321849aaENSMUSP00000138345.2
 
Protein coding
-S4R1S0 TSL:5CDS 5' incomplete
Sipa1l3-207ENSMUST00000182484.22420726aaENSMUSP00000138714.2
 
Protein coding
-S4R2N4 GENCODE basicTSL:5
Sipa1l3-202ENSMUST00000181975.867827aaENSMUSP00000138592.2
 
Protein coding
-S4R2C7 TSL:3CDS 3' incomplete
Sipa1l3-210ENSMUST00000182780.8601115aaENSMUSP00000138311.2
 
Protein coding
-S4R1P8 TSL:5CDS 5' incomplete
Sipa1l3-217ENSMUST00000183275.245225aaENSMUSP00000138381.2
 
Protein coding
-S4R1U8 TSL:5CDS 3' incomplete
Sipa1l3-204ENSMUST00000182011.82774No protein-
 
Processed transcript
--TSL:1
Sipa1l3-213ENSMUST00000183081.2625No protein-
 
Processed transcript
--TSL:1
Sipa1l3-209ENSMUST00000182702.8537No protein-
 
Processed transcript
--TSL:2
Sipa1l3-206ENSMUST00000182236.2503No protein-
 
Processed transcript
--TSL:3
Sipa1l3-214ENSMUST00000183085.2254No protein-
 
Processed transcript
--TSL:5
Sipa1l3-211ENSMUST00000182829.86385No protein-
 
Retained intron
--TSL:1
Sipa1l3-205ENSMUST00000182223.83697No protein-
 
Retained intron
--TSL:1
Sipa1l3-203ENSMUST00000182009.82660No protein-
 
Retained intron
--TSL:1
Sipa1l3-212ENSMUST00000182911.21708No protein-
 
Retained intron
--TSL:NA
Sipa1l3-216ENSMUST00000183164.2712No protein-
 
Retained intron
--TSL:3
Sipa1l3-208ENSMUST00000182529.2702No protein-
 
Retained intron
--TSL:2
Description

leukocyte specific transcript 1 [Source:HGNC Symbol;Acc:HGNC:14189]

Gene Synonyms

B144, D6S49E, LST-1

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
LST1-371ENST00000438335.5648104aaENSP00000403097.1
 
Protein coding
-O00453-11 -Ensembl CanonicalGENCODE basicTSL:1
LST1-373ENST00000443741.676497aaENSP00000388956.2
 
Protein coding
-O00453-1 -GENCODE basicTSL:1
LST1-367ENST00000430680.573466aaENSP00000398918.1
 
Protein coding
-O00453-12 -GENCODE basicTSL:1
LST1-369ENST00000433676.672666aaENSP00000411866.2
 
Protein coding
-O00453-10 -GENCODE basicTSL:2
LST1-360ENST00000411490.571297aaENSP00000395409.1
 
Protein coding
-O00453-1 -GENCODE basicTSL:3
LST1-365ENST00000427164.568928aaENSP00000413488.1
 
Protein coding
-Q5STB1 -GENCODE basicTSL:2
LST1-370ENST00000436185.566866aaENSP00000396579.1
 
Protein coding
-O00453-10 -GENCODE basicTSL:1
LST1-377ENST00000448381.566582aaENSP00000407803.1
 
Protein coding
-A0A024RCL9 -GENCODE basicTSL:5
LST1-368ENST00000430997.562459aaENSP00000389795.1
 
Protein coding
-O00453-5 -GENCODE basicTSL:3
LST1-374ENST00000443931.561928aaENSP00000401621.1
 
Protein coding
-Q5STB1 -GENCODE basicTSL:2
LST1-361ENST00000414821.561028aaENSP00000416118.1
 
Protein coding
-Q5STB1 -GENCODE basicTSL:2
LST1-378ENST00000453818.560328aaENSP00000387689.1
 
Protein coding
-Q5STB1 -GENCODE basicTSL:1
LST1-362ENST00000415419.558551aaENSP00000415143.1
 
Protein coding
-O00453-6 -GENCODE basicTSL:3
LST1-364ENST00000420797.557166aaENSP00000390587.1
 
Protein coding
-O00453-10 -GENCODE basicTSL:2
LST1-376ENST00000447141.556513aaENSP00000397826.1
 
Protein coding
-O00453-9 -GENCODE basicTSL:2
LST1-379ENST00000457549.555573aaENSP00000390885.1
 
Protein coding
-O00453-13 -GENCODE basicTSL:1
LST1-366ENST00000427186.553235aaENSP00000399439.1
 
Protein coding
-O00453-8 -GENCODE basicTSL:1
LST1-363ENST00000418796.145543aaENSP00000391961.1
 
Protein coding
-A0A0G2JHS1 -TSL:1CDS 5' incomplete
LST1-372ENST00000441641.525946aaENSP00000395652.1
 
Protein coding
-A0A0G2JIN5 -TSL:3CDS 3' incomplete
LST1-375ENST00000444783.525436aaENSP00000410543.1
 
Protein coding
-Q5HYT5 -TSL:3CDS 3' incomplete
LST1-382ENST00000478511.11832No protein-
 
Retained intron
---TSL:1
LST1-381ENST00000471920.11563No protein-
 
Retained intron
---TSL:5
LST1-380ENST00000462154.1607No protein-
 
Retained intron
---TSL:3
Description

hyaluronan synthase 3 [Source:HGNC Symbol;Acc:HGNC:4820]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
HAS3-205ENST00000569188.64191553aaENSP00000454731.1
 
Protein coding
CCDS10871O00219-1 NM_001199280.2MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:2
HAS3-202ENST00000306560.14220553aaENSP00000304440.1
 
Protein coding
CCDS10871O00219-1 -GENCODE basicAPPRIS P1TSL:1
HAS3-201ENST00000219322.71163281aaENSP00000219322.3
 
Protein coding
CCDS10870O00219-2 -GENCODE basicTSL:1
HAS3-203ENST00000566118.5900264aaENSP00000456246.1
 
Protein coding
-H3BRH5 -TSL:5CDS 3' incomplete
HAS3-204ENST00000568321.1480No protein-
 
Processed transcript
---TSL:2
Description

ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]

Gene Synonyms

Hud

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Elavl4-203ENSMUST00000106597.104149385aaENSMUSP00000102207.4
 
Protein coding
CCDS18471Q61701-1 GENCODE basicTSL:1
Elavl4-201ENSMUST00000102722.94107371aaENSMUSP00000099783.3
 
Protein coding
CCDS51261Q61701-10 GENCODE basicAPPRIS P3TSL:1
Elavl4-202ENSMUST00000102723.114024380aaENSMUSP00000099784.5
 
Protein coding
CCDS18470Q61701-4 GENCODE basicTSL:1
Elavl4-204ENSMUST00000106598.83997366aaENSMUSP00000102208.2
 
Protein coding
CCDS84777Q61701-5 GENCODE basicAPPRIS ALT1TSL:5
Elavl4-207ENSMUST00000106603.93761356aaENSMUSP00000102214.3
 
Protein coding
CCDS51262Q61701-6 GENCODE basicTSL:1
Elavl4-205ENSMUST00000106600.93799383aaENSMUSP00000102210.3
 
Protein coding
-Q61701-9 GENCODE basicTSL:5
Elavl4-206ENSMUST00000106601.83775366aaENSMUSP00000102212.2
 
Protein coding
-Q61701-7 GENCODE basicAPPRIS ALT1TSL:5
Elavl4-212ENSMUST00000153906.266394aaENSMUSP00000120942.2
 
Protein coding
-A2A9R5 TSL:5CDS 3' incomplete
Elavl4-208ENSMUST00000138972.8644137aaENSMUSP00000123014.2
 
Protein coding
-A2A9R4 TSL:5CDS 3' incomplete
Elavl4-209ENSMUST00000142722.248892aaENSMUSP00000121828.2
 
Protein coding
-Q61701-8 TSL:2CDS 3' incomplete
Elavl4-211ENSMUST00000153200.2869No protein-
 
Processed transcript
--TSL:3
Elavl4-210ENSMUST00000144554.2464No protein-
 
Processed transcript
--TSL:5
Description

ALG13 UDP-N-acetylglucosaminyltransferase subunit [Source:HGNC Symbol;Acc:HGNC:30881]

Gene Synonyms

CDG1S, CXorf45, FLJ23018, GLT28D1, MDS031, TDRD13, YGL047W

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ALG13-203ENST00000394780.841131137aaENSP00000378260.3
 
Protein coding
CCDS55477Q9NP73-1 NM_001099922.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:2
ALG13-224ENST00000610588.441751059aaENSP00000479731.1
 
Protein coding
CCDS76012Q9NP73-3 -GENCODE basicTSL:2
ALG13-201ENST00000251943.83997954aaENSP00000251943.4
 
Protein coding
CCDS59173Q9NP73-4 -GENCODE basicTSL:2
ALG13-225ENST00000621367.43893954aaENSP00000481509.1
 
Protein coding
CCDS59173Q9NP73-4 -GENCODE basicTSL:2
ALG13-204ENST00000436609.53812954aaENSP00000392990.2
 
Protein coding
CCDS59173Q9NP73-4 -GENCODE basicTSL:5
ALG13-202ENST00000371979.72770165aaENSP00000361047.3
 
Protein coding
CCDS14559Q9NP73-2 -GENCODE basicTSL:1
ALG13-211ENST00000473389.5693133aaENSP00000480711.1
 
Protein coding
CCDS76011A0A087WX43 -GENCODE basicTSL:2
ALG13-214ENST00000482742.562061aaENSP00000477513.1
 
Protein coding
CCDS76013A0A087WT15 -GENCODE basicTSL:2
ALG13-230ENST00000623189.145861aaENSP00000485392.1
 
Protein coding
CCDS76013A0A087WT15 -GENCODE basicTSL:3
ALG13-233ENST00000623622.11121373aaENSP00000485624.1
 
Protein coding
-A0A096LPI3 -TSL:5CDS 5' and 3' incomplete
ALG13-231ENST00000623255.1585162aaENSP00000485333.1
 
Protein coding
-A0A096LP10 -TSL:3CDS 5' incomplete
ALG13-226ENST00000622986.3582132aaENSP00000485067.1
 
Protein coding
-A0A096LNJ4 -GENCODE basicTSL:2
ALG13-232ENST00000623310.144077aaENSP00000485071.1
 
Protein coding
-A0A096LNJ5 -TSL:2CDS 5' incomplete
ALG13-212ENST00000474121.143642aaENSP00000485400.1
 
Protein coding
-A0A096LP54 -TSL:3CDS 5' incomplete
ALG13-234ENST00000624161.3376143aaENSP00000485181.1
 
Nonsense mediated decay
-A0A087WVG5 -TSL:2
ALG13-228ENST00000623144.3369351aaENSP00000485279.1
 
Nonsense mediated decay
-A0A087WX01 -TSL:2
ALG13-229ENST00000623148.3368935aaENSP00000485658.1
 
Nonsense mediated decay
-A0A096LPK3 -TSL:2CDS 5' incomplete
ALG13-239ENST00000636363.13480296aaENSP00000490681.1
 
Nonsense mediated decay
-A0A1B0GVW6 -TSL:5
ALG13-223ENST00000495283.5323651aaENSP00000427093.3
 
Nonsense mediated decay
-A0A087WX01 -TSL:2
ALG13-209ENST00000470971.5320043aaENSP00000479424.2
 
Nonsense mediated decay
-A0A087WVG5 -TSL:5
ALG13-222ENST00000492038.5109843aaENSP00000479483.1
 
Nonsense mediated decay
-A0A087WVG5 -TSL:3
ALG13-207ENST00000468657.591651aaENSP00000480638.2
 
Nonsense mediated decay
-A0A087WX01 -TSL:2
ALG13-216ENST00000486353.5916159aaENSP00000426892.2
 
Nonsense mediated decay
-D6RE84 -TSL:5
ALG13-235ENST00000624881.3876150aaENSP00000485093.1
 
Nonsense mediated decay
-A0A096LNL2 -TSL:5
ALG13-220ENST00000489033.578551aaENSP00000482257.2
 
Nonsense mediated decay
-A0A087WX01 -TSL:3
ALG13-218ENST00000487141.5745171aaENSP00000478130.1
 
Nonsense mediated decay
-A0A087WTT9 -TSL:5
ALG13-210ENST00000471924.571135aaENSP00000484523.2
 
Nonsense mediated decay
-A0A096LPK3 -TSL:3CDS 5' incomplete
ALG13-213ENST00000482374.567951aaENSP00000479632.1
 
Nonsense mediated decay
-A0A087WX01 -TSL:2
ALG13-227ENST00000622997.359451aaENSP00000485420.1
 
Nonsense mediated decay
-A0A087WX01 -TSL:5
ALG13-206ENST00000461669.5699No protein-
 
Processed transcript
---TSL:3
ALG13-217ENST00000486578.4686No protein-
 
Processed transcript
---TSL:2
ALG13-205ENST00000460092.2520No protein-
 
Processed transcript
---TSL:3
ALG13-221ENST00000490774.2325No protein-
 
Processed transcript
---TSL:2
ALG13-236ENST00000635768.1100No protein-
 
Processed transcript
---TSL:5
ALG13-238ENST00000635931.1100No protein-
 
Processed transcript
---TSL:5
ALG13-241ENST00000637213.1100No protein-
 
Processed transcript
---TSL:5
ALG13-240ENST00000637022.191No protein-
 
Processed transcript
---TSL:5
ALG13-237ENST00000635824.189No protein-
 
Processed transcript
---TSL:5
ALG13-219ENST00000487243.1651No protein-
 
Retained intron
---TSL:2
ALG13-208ENST00000470704.1536No protein-
 
Retained intron
---TSL:2
ALG13-215ENST00000485371.1331No protein-
 
Retained intron
---TSL:3
Description

recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]

Gene Synonyms

CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJK, RBPSUH, SUH

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
RBPJ-205ENST00000355476.85395487aaENSP00000347659.4
 
Protein coding
CCDS43219Q06330-6 NM_015874.6MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
RBPJ-202ENST00000342320.85761486aaENSP00000340124.4
 
Protein coding
CCDS33969Q06330-6 -GENCODE basicAPPRIS P2TSL:1
RBPJ-244ENST00000681484.12169465aaENSP00000505636.1
 
Protein coding
CCDS87214--GENCODE basic
RBPJ-211ENST00000505958.62136486aaENSP00000426872.2
 
Protein coding
CCDS33969D6RE93 -GENCODE basicAPPRIS P2TSL:5
RBPJ-240ENST00000681093.12100486aaENSP00000504964.1
 
Protein coding
CCDS33969--GENCODE basicAPPRIS P2
RBPJ-204ENST00000348160.91998486aaENSP00000339699.5
 
Protein coding
CCDS33969Q06330-7 -GENCODE basicAPPRIS P2TSL:1
RBPJ-201ENST00000342295.61992500aaENSP00000345206.1
 
Protein coding
CCDS3437Q06330-1 -GENCODE basicTSL:5
RBPJ-238ENST00000680928.11850486aaENSP00000505493.1
 
Protein coding
CCDS33969--GENCODE basicAPPRIS P2
RBPJ-223ENST00000512671.61843500aaENSP00000423644.2
 
Protein coding
CCDS3437D6R946 -GENCODE basicTSL:2
RBPJ-206ENST00000361572.101697500aaENSP00000354528.6
 
Protein coding
CCDS3437Q06330-1 -GENCODE basicTSL:1
RBPJ-214ENST00000507561.51689465aaENSP00000423907.1
 
Protein coding
CCDS87214Q06330-5 -GENCODE basicTSL:1
RBPJ-203ENST00000345843.81682465aaENSP00000305815.6
 
Protein coding
CCDS87214Q06330-4 -GENCODE basicTSL:1
RBPJ-242ENST00000681264.11675465aaENSP00000505255.1
 
Protein coding
CCDS87214--GENCODE basic
RBPJ-207ENST00000504423.21621465aaENSP00000421804.2
 
Protein coding
CCDS87214H0Y8R3 -GENCODE basicTSL:5
RBPJ-237ENST00000680511.12106434aaENSP00000506628.1
 
Protein coding
---CDS 3' incomplete
RBPJ-241ENST00000681260.11737463aaENSP00000505479.1
 
Protein coding
---CDS 3' incomplete
RBPJ-248ENST00000681856.11706457aaENSP00000505922.1
 
Protein coding
---CDS 3' incomplete
RBPJ-234ENST00000680140.11685440aaENSP00000506443.1
 
Protein coding
---GENCODE basic
RBPJ-208ENST00000504907.51682382aaENSP00000423703.1
 
Protein coding
-D6R927 -GENCODE basicTSL:5
RBPJ-216ENST00000509158.61678434aaENSP00000424804.2
 
Protein coding
-D6RF98 -TSL:2
RBPJ-209ENST00000504938.1731143aaENSP00000424459.1
 
Protein coding
-D6RB37 -TSL:3CDS 3' incomplete
RBPJ-231ENST00000515573.5698189aaENSP00000423406.1
 
Protein coding
-D6RA45 -TSL:5CDS 3' incomplete
RBPJ-222ENST00000512351.560994aaENSP00000424789.1
 
Protein coding
-D6RAT2 -TSL:4CDS 3' incomplete
RBPJ-215ENST00000507574.5607157aaENSP00000422617.1
 
Protein coding
-D6RBQ8 -TSL:5CDS 3' incomplete
RBPJ-227ENST00000514675.5578110aaENSP00000423575.1
 
Protein coding
-D6R9K5 -TSL:5CDS 3' incomplete
RBPJ-221ENST00000511546.5572107aaENSP00000422838.1
 
Protein coding
-D6R9X3 -TSL:5CDS 3' incomplete
RBPJ-228ENST00000514730.5569113aaENSP00000425061.1
 
Protein coding
-D6REC2 -TSL:5CDS 3' incomplete
RBPJ-213ENST00000506956.556697aaENSP00000425750.1
 
Protein coding
-D6RIZ8 -TSL:4CDS 3' incomplete
RBPJ-229ENST00000514807.534048aaENSP00000424989.1
 
Protein coding
-D6REP3 -TSL:3CDS 3' incomplete
RBPJ-245ENST00000681506.1188960aaENSP00000504925.1
 
Nonsense mediated decay
----
RBPJ-233ENST00000679698.1187860aaENSP00000506331.1
 
Nonsense mediated decay
----
RBPJ-246ENST00000681679.11766184aaENSP00000505870.1
 
Nonsense mediated decay
----
RBPJ-232ENST00000679469.11657105aaENSP00000504953.1
 
Nonsense mediated decay
----
RBPJ-239ENST00000681025.1163759aaENSP00000504979.1
 
Nonsense mediated decay
----
RBPJ-247ENST00000681799.1153458aaENSP00000504876.1
 
Nonsense mediated decay
----
RBPJ-235ENST00000680204.1130752aaENSP00000506010.1
 
Nonsense mediated decay
----
RBPJ-218ENST00000510778.71198185aaENSP00000427170.3
 
Nonsense mediated decay
-D6RCM1 -TSL:5
RBPJ-236ENST00000680210.1119161aaENSP00000505411.1
 
Nonsense mediated decay
----
RBPJ-224ENST00000513182.553753aaENSP00000427344.1
 
Nonsense mediated decay
-D6RIV8 -TSL:4
RBPJ-230ENST00000515023.61476No protein-
 
Processed transcript
---TSL:5
RBPJ-219ENST00000511401.5577No protein-
 
Processed transcript
---TSL:5
RBPJ-226ENST00000514656.3455No protein-
 
Processed transcript
---TSL:2
RBPJ-243ENST00000681403.11671No protein-
 
Retained intron
----
RBPJ-225ENST00000514380.51519No protein-
 
Retained intron
---TSL:2
RBPJ-210ENST00000505727.1860No protein-
 
Retained intron
---TSL:2
RBPJ-220ENST00000511451.5742No protein-
 
Retained intron
---TSL:2
RBPJ-212ENST00000506903.1658No protein-
 
Retained intron
---TSL:3
RBPJ-217ENST00000510725.1546No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 12, Coding exons: 3, Transcript length: 1,657 bps, Translation length: 105 residues

Version

ENST00000679469.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x30068f40)