Human (GRCh38.p14)
Description

BSCL2 lipid droplet biogenesis associated, seipin [Source:HGNC Symbol;Acc:HGNC:15832]

Gene Synonyms

GNG3LG, SEIPIN, SPG17

Location
About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 9131 variant alleles and maps to 517 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000360796.10BSCL2-2031710462aaENSP00000354032.5
 
Protein coding
CCDS44627Q96G97-4 NM_001122955.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000684475.1BSCL2-2452724417aaENSP00000507429.1
 
Protein coding
A0A804HJB1 -GENCODE basic
ENST00000449636.6BSCL2-2122381298aaENSP00000405265.2
 
Protein coding
H7C2D5 -GENCODE basicTSL:3
ENST00000679883.1BSCL2-2272001462aaENSP00000505838.1
 
Protein coding
CCDS44627Q96G97-4 -GENCODE basicAPPRIS ALT2
ENST00000405837.5BSCL2-2061984464aaENSP00000385332.1
 
Protein coding
CCDS91493J3KQ12 -GENCODE basicAPPRIS P4TSL:1
ENST00000683296.1BSCL2-2361882465aaENSP00000507725.1
 
Protein coding
A0A804HK11 -GENCODE basicAPPRIS ALT2
ENST00000524862.6BSCL2-2171863462aaENSP00000433888.2
 
Protein coding
CCDS44627Q96G97-4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000684067.1BSCL2-2411818448aaENSP00000506799.1
 
Protein coding
A0A804HHX0 -GENCODE basic
ENST00000682223.1BSCL2-2291793418aaENSP00000508140.1
 
Protein coding
A0A804HKZ9 -GENCODE basic
ENST00000403550.5BSCL2-2051693398aaENSP00000385561.1
 
Protein coding
CCDS8031Q96G97-2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000407022.7BSCL2-2071516398aaENSP00000384080.3
 
Protein coding
CCDS8031Q96G97-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000421906.5BSCL2-2101440398aaENSP00000413209.1
 
Protein coding
CCDS8031Q96G97-2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000278893.11BSCL2-2011364287aaENSP00000278893.7
 
Protein coding
CCDS55769Q96G97-3 -GENCODE basicTSL:2
ENST00000448568.6BSCL2-211992223aaENSP00000413340.2
 
Protein coding
F8W7Q8 -TSL:3CDS 3' incomplete
ENST00000531524.5BSCL2-222844111aaENSP00000436026.1
 
Protein coding
E9PR78 -TSL:3CDS 3' incomplete
ENST00000464544.1BSCL2-21479493aaENSP00000431782.1
 
Protein coding
E9PJK0 -TSL:2CDS 3' incomplete
ENST00000532818.5BSCL2-224662123aaENSP00000435831.1
 
Protein coding
E9PSB5 -TSL:2CDS 3' incomplete
ENST00000533982.1BSCL2-22558599aaENSP00000434149.1
 
Protein coding
E9PRU2 -TSL:5CDS 3' incomplete
ENST00000528874.1BSCL2-21955323aaENSP00000436991.1
 
Protein coding
E9PPN5 -TSL:4CDS 3' incomplete
ENST00000530009.1BSCL2-22053928aaENSP00000435500.1
 
Protein coding
E9PJS9 -TSL:4CDS 3' incomplete
ENST00000403098.6BSCL2-20432679aaENSP00000384258.2
 
Protein coding
H7BYY0 -TSL:5CDS 5' incomplete
ENST00000683025.1BSCL2-2343133162aaENSP00000507028.1
 
Nonsense mediated decay
A0A804HIE2 --
ENST00000684285.1BSCL2-2442777136aaENSP00000507669.1
 
Nonsense mediated decay
A0A804HJW1 --
ENST00000682555.1BSCL2-2312777268aaENSP00000507814.1
 
Nonsense mediated decay
A0A804HK83 --
ENST00000682262.1BSCL2-2302764280aaENSP00000507103.1
 
Nonsense mediated decay
A0A804HIJ7 --
ENST00000301781.10BSCL2-2021712277aaENSP00000301781.5
 
Nonsense mediated decay
H7BXM1 -TSL:5
ENST00000413908.1BSCL2-20957839aaENSP00000393728.1
 
Nonsense mediated decay
F8WER0 -TSL:4
ENST00000537604.5BSCL2-226691No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000530900.1BSCL2-221398No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000526426.1BSCL2-218353No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000532115.5BSCL2-223328No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000683494.1BSCL2-2383344No protein-
 
Retained intron
---
ENST00000684720.1BSCL2-2473123No protein-
 
Retained intron
---
ENST00000683892.1BSCL2-2403107No protein-
 
Retained intron
---
ENST00000684115.1BSCL2-2423048No protein-
 
Retained intron
---
ENST00000683846.1BSCL2-2392807No protein-
 
Retained intron
---
ENST00000684609.1BSCL2-2462315No protein-
 
Retained intron
---
ENST00000684258.1BSCL2-2432238No protein-
 
Retained intron
---
ENST00000682644.1BSCL2-2322166No protein-
 
Retained intron
---
ENST00000682794.1BSCL2-2331954No protein-
 
Retained intron
---
ENST00000682003.1BSCL2-2281852No protein-
 
Retained intron
---
ENST00000683368.1BSCL2-2371835No protein-
 
Retained intron
---
ENST00000412351.2BSCL2-2081641No protein-
 
Retained intron
--TSL:3
ENST00000463679.6BSCL2-2131493No protein-
 
Retained intron
--TSL:2
ENST00000683193.1BSCL2-2351240No protein-
 
Retained intron
---
ENST00000468505.5BSCL2-215547No protein-
 
Retained intron
--TSL:2
ENST00000470529.5BSCL2-216512No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,818 bps, Translation length: 448 residues

Version

ENST00000684067.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.