Human (GRCh38.p14)
Description

sphingomyelin phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:11120]

Gene Synonyms

ASM

Location
About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 3473 variant alleles and maps to 476 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000342245.9SMPD1-2012410631aaENSP00000340409.4
 
Protein coding
CCDS44531P17405-1 NM_000543.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000527275.5SMPD1-2032188630aaENSP00000435350.1
 
Protein coding
CCDS31409P17405-4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000526280.1SMPD1-2021344317aaENSP00000436278.1
 
Protein coding
H0YEP5 -TSL:1CDS 5' incomplete
ENST00000530395.1SMPD1-20444752aaENSP00000431479.1
 
Protein coding
E9PL59 -TSL:5CDS 3' incomplete
ENST00000534405.5SMPD1-2102446402aaENSP00000434353.1
 
Nonsense mediated decay
E9PQT3 -TSL:1
ENST00000533123.5SMPD1-2082211366aaENSP00000435950.1
 
Nonsense mediated decay
G3V1E1 -TSL:1
ENST00000531303.5SMPD1-2051451171aaENSP00000432625.1
 
Nonsense mediated decay
E9PPK6 -TSL:1
ENST00000533196.1SMPD1-209425No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000531336.1SMPD1-206650No protein-
 
Retained intron
--TSL:2
ENST00000532367.1SMPD1-207409No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,410 bps, Translation length: 631 residues

MANE

This MANE Select transcript contains ENSP00000340409 and matches to NM_000543.5 and NP_000534.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17405

CCDS

This transcript is a member of the Human CCDS set: CCDS44531

Transcript Support Level (TSL)

TSL:1

Version

ENST00000342245.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.