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EnsemblEnsembl Home
Description

long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]

Gene Synonyms

onco-lncRNA-12

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC00511-279ENST00000650033.13766No protein-
 
Retained intron
---
LINC00511-278ENST00000650016.1508No protein-
 
Retained intron
---
LINC00511-244ENST00000648631.12929No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
LINC00511-220ENST00000647652.13700No protein-
 
lncRNA
--GENCODE basic
LINC00511-215ENST00000582712.22586No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-221ENST00000647706.22532No protein-
 
lncRNA
---
LINC00511-261ENST00000649350.12527No protein-
 
lncRNA
---
LINC00511-243ENST00000648623.22522No protein-
 
lncRNA
---
LINC00511-225ENST00000647953.12292No protein-
 
lncRNA
--GENCODE basic
LINC00511-283ENST00000650131.22282No protein-
 
lncRNA
---
LINC00511-213ENST00000581549.22266No protein-
 
lncRNA
--GENCODE basicTSL:2
LINC00511-235ENST00000648401.12214No protein-
 
lncRNA
--GENCODE basic
LINC00511-274ENST00000649793.22208No protein-
 
lncRNA
---
LINC00511-280ENST00000650051.12207No protein-
 
lncRNA
---
LINC00511-289ENST00000650212.12174No protein-
 
lncRNA
--GENCODE basic
LINC00511-276ENST00000649881.12078No protein-
 
lncRNA
---
LINC00511-294ENST00000650371.12061No protein-
 
lncRNA
---
LINC00511-272ENST00000649647.12060No protein-
 
lncRNA
---
LINC00511-302ENST00000650550.22041No protein-
 
lncRNA
--GENCODE basic
LINC00511-262ENST00000649366.12028No protein-
 
lncRNA
---
LINC00511-292ENST00000650313.11995No protein-
 
lncRNA
--GENCODE basic
LINC00511-255ENST00000649250.11978No protein-
 
lncRNA
---
LINC00511-224ENST00000647871.21958No protein-
 
lncRNA
--GENCODE basic
LINC00511-252ENST00000649074.11905No protein-
 
lncRNA
--GENCODE basic
LINC00511-249ENST00000648952.11893No protein-
 
lncRNA
---
LINC00511-299ENST00000650483.11888No protein-
 
lncRNA
---
LINC00511-240ENST00000648520.11888No protein-
 
lncRNA
--GENCODE basic
LINC00511-237ENST00000648411.11843No protein-
 
lncRNA
--GENCODE basic
LINC00511-264ENST00000649433.11836No protein-
 
lncRNA
--GENCODE basic
LINC00511-234ENST00000648297.11823No protein-
 
lncRNA
---
LINC00511-257ENST00000649311.11815No protein-
 
lncRNA
---
LINC00511-253ENST00000649172.11788No protein-
 
lncRNA
---
LINC00511-216ENST00000583460.21778No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00511-275ENST00000649833.11772No protein-
 
lncRNA
---
LINC00511-245ENST00000648667.11751No protein-
 
lncRNA
--GENCODE basic
LINC00511-273ENST00000649733.11742No protein-
 
lncRNA
---
LINC00511-205ENST00000578206.21732No protein-
 
lncRNA
--TSL:3
LINC00511-201ENST00000453722.61716No protein-
 
lncRNA
--TSL:2
LINC00511-227ENST00000648069.11713No protein-
 
lncRNA
--GENCODE basic
LINC00511-218ENST00000647593.11690No protein-
 
lncRNA
---
LINC00511-266ENST00000649489.11682No protein-
 
lncRNA
---
LINC00511-230ENST00000648176.21647No protein-
 
lncRNA
---
LINC00511-202ENST00000457958.71626No protein-
 
lncRNA
--TSL:1
LINC00511-236ENST00000648403.11556No protein-
 
lncRNA
--GENCODE basic
LINC00511-260ENST00000649343.11552No protein-
 
lncRNA
---
LINC00511-306ENST00000650602.21510No protein-
 
lncRNA
--GENCODE basic
LINC00511-233ENST00000648248.11468No protein-
 
lncRNA
---
LINC00511-296ENST00000650423.11455No protein-
 
lncRNA
---
LINC00511-241ENST00000648522.11351No protein-
 
lncRNA
---
LINC00511-281ENST00000650083.11329No protein-
 
lncRNA
---
LINC00511-229ENST00000648104.21264No protein-
 
lncRNA
---
LINC00511-270ENST00000649597.11206No protein-
 
lncRNA
---
LINC00511-298ENST00000650482.11202No protein-
 
lncRNA
---
LINC00511-265ENST00000649440.21159No protein-
 
lncRNA
---
LINC00511-290ENST00000650227.11126No protein-
 
lncRNA
---
LINC00511-271ENST00000649614.11098No protein-
 
lncRNA
---
LINC00511-267ENST00000649532.11045No protein-
 
lncRNA
---
LINC00511-263ENST00000649407.11045No protein-
 
lncRNA
---
LINC00511-226ENST00000648054.11027No protein-
 
lncRNA
---
LINC00511-288ENST00000650211.1977No protein-
 
lncRNA
---
LINC00511-286ENST00000650191.1951No protein-
 
lncRNA
---
LINC00511-254ENST00000649197.1937No protein-
 
lncRNA
--GENCODE basic
LINC00511-291ENST00000650289.2862No protein-
 
lncRNA
---
LINC00511-212ENST00000581183.3860No protein-
 
lncRNA
--TSL:3
LINC00511-295ENST00000650419.1853No protein-
 
lncRNA
---
LINC00511-246ENST00000648672.2841No protein-
 
lncRNA
---
LINC00511-297ENST00000650476.1826No protein-
 
lncRNA
---
LINC00511-268ENST00000649553.1819No protein-
 
lncRNA
---
LINC00511-277ENST00000649936.1796No protein-
 
lncRNA
---
LINC00511-284ENST00000650161.1791No protein-
 
lncRNA
---
LINC00511-256ENST00000649269.1789No protein-
 
lncRNA
---
LINC00511-238ENST00000648428.1780No protein-
 
lncRNA
---
LINC00511-219ENST00000647611.1762No protein-
 
lncRNA
---
LINC00511-287ENST00000650194.2762No protein-
 
lncRNA
---
LINC00511-214ENST00000581801.6749No protein-
 
lncRNA
--TSL:3
LINC00511-231ENST00000648203.1746No protein-
 
lncRNA
---
LINC00511-248ENST00000648907.1736No protein-
 
lncRNA
---
LINC00511-210ENST00000580861.2701No protein-
 
lncRNA
--GENCODE basicTSL:4
LINC00511-301ENST00000650510.1692No protein-
 
lncRNA
---
LINC00511-285ENST00000650180.1691No protein-
 
lncRNA
---
LINC00511-250ENST00000648954.1689No protein-
 
lncRNA
---
LINC00511-208ENST00000580199.7678No protein-
 
lncRNA
--TSL:3
LINC00511-228ENST00000648088.1669No protein-
 
lncRNA
---
LINC00511-232ENST00000648220.1668No protein-
 
lncRNA
---
LINC00511-204ENST00000577828.6656No protein-
 
lncRNA
--TSL:3
LINC00511-304ENST00000650570.1617No protein-
 
lncRNA
---
LINC00511-209ENST00000580500.5561No protein-
 
lncRNA
--TSL:4
LINC00511-203ENST00000577773.2532No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-303ENST00000650554.1514No protein-
 
lncRNA
---
LINC00511-259ENST00000649332.1509No protein-
 
lncRNA
---
LINC00511-247ENST00000648840.1502No protein-
 
lncRNA
---
LINC00511-222ENST00000647735.1496No protein-
 
lncRNA
--GENCODE basic
LINC00511-211ENST00000580948.1475No protein-
 
lncRNA
--TSL:3
LINC00511-269ENST00000649595.2471No protein-
 
lncRNA
---
LINC00511-206ENST00000579631.2448No protein-
 
lncRNA
--TSL:2
LINC00511-293ENST00000650357.1325No protein-
 
lncRNA
---
LINC00511-251ENST00000649013.1266No protein-
 
lncRNA
---
LINC00511-242ENST00000648559.1261No protein-
 
lncRNA
---
LINC00511-300ENST00000650499.1231No protein-
 
lncRNA
---
LINC00511-258ENST00000649330.1230No protein-
 
lncRNA
---
LINC00511-239ENST00000648500.1219No protein-
 
lncRNA
---
LINC00511-207ENST00000580175.2208No protein-
 
lncRNA
--TSL:3
LINC00511-217ENST00000584749.2173No protein-
 
lncRNA
--TSL:3
LINC00511-305ENST00000650600.1117No protein-
 
lncRNA
---
LINC00511-223ENST00000647850.1111No protein-
 
lncRNA
---
LINC00511-282ENST00000650121.1108No protein-
 
lncRNA
---
Description

transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]

Gene Synonyms

ERIC-1, ERIC1, Tacc4, maskin

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TACC3-201ENST00000313288.92799838aaENSP00000326550.4
 
Protein coding
CCDS3352Q9Y6A5 NM_006342.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
TACC3-214ENST00000651472.12764838aaENSP00000498361.1
 
Protein coding
CCDS3352Q9Y6A5 -GENCODE basicAPPRIS P2
TACC3-217ENST00000652770.12826834aaENSP00000498219.1
 
Protein coding
-A0A494BZT8 -GENCODE basicAPPRIS ALT2
TACC3-211ENST00000612220.51732478aaENSP00000478580.2
 
Protein coding
-A0A087WUE2 -APPRIS ALT2TSL:5
TACC3-203ENST00000458173.41093272aaENSP00000415914.4
 
Protein coding
-E7EMT0 -TSL:5CDS 3' incomplete
TACC3-210ENST00000493975.5825230aaENSP00000418095.1
 
Protein coding
-C9JA91 -TSL:3CDS 3' incomplete
TACC3-206ENST00000470136.2657217aaENSP00000420838.1
 
Protein coding
-H0Y8F2 -TSL:3CDS 5' incomplete
TACC3-215ENST00000651817.12943325aaENSP00000498817.1
 
Nonsense mediated decay
-A0A494C117 -CDS 5' incomplete
TACC3-205ENST00000467746.679263aaENSP00000418727.1
 
Nonsense mediated decay
-F8WC55 -TSL:3
TACC3-213ENST00000651251.12788No protein-
 
Processed transcript
----
TACC3-216ENST00000652002.1914No protein-
 
Processed transcript
----
TACC3-202ENST00000404054.32771No protein-
 
Retained intron
---TSL:NA
TACC3-209ENST00000484651.52715No protein-
 
Retained intron
---TSL:2
TACC3-212ENST00000650779.11567No protein-
 
Retained intron
----
TACC3-207ENST00000470808.1947No protein-
 
Retained intron
---TSL:2
TACC3-204ENST00000466077.1583No protein-
 
Retained intron
---TSL:2
TACC3-208ENST00000484264.1551No protein-
 
Retained intron
---TSL:2
Description

bloodthirsty-related gene family, member 25 [Source:ZFIN;Acc:ZDB-GENE-070705-377]

Gene Synonyms

si:dkey-218f9.5

Location
NameTranscript IDbpProteinTranslation IDBiotypeUniProt MatchFlags
btr25-205ENSDART00000172424.22059557aaENSDARP00000130844.1
 
Protein coding
A9JSZ8 APPRIS P5
btr25-203ENSDART00000161804.22051554aaENSDARP00000135544.1
 
Protein coding
A0A0N4SU27 APPRIS ALT2
btr25-201ENSDART00000158309.21685530aaENSDARP00000137909.1
 
Protein coding
A0A0N4SU77 APPRIS ALT2
btr25-204ENSDART00000166773.2807269aaENSDARP00000135921.1
 
Protein coding
A0A0J9YJC0 CDS 5' and 3' incomplete
btr25-202ENSDART00000161676.2801185aaENSDARP00000141539.1
 
Protein coding
A0A0N4SUF6 CDS 3' incomplete
Description

paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]

Gene Synonyms

AN, AN1, AN2, D11S812E, WAGR

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
PAX6-269ENST00000640368.22743436aaENSP00000492024.1
 
Protein coding
CCDS31452P26367-2 NM_001368894.2MANE Select v0.93Ensembl CanonicalGENCODE basicTSL:5
PAX6-282ENST00000643871.16944422aaENSP00000495109.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1
PAX6-244ENST00000638914.36922436aaENSP00000492315.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
PAX6-231ENST00000606377.76888436aaENSP00000480026.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
PAX6-209ENST00000419022.66888436aaENSP00000404100.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
PAX6-254ENST00000639386.26509286aaENSP00000492658.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
PAX6-203ENST00000379109.73182422aaENSP00000368403.2
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:2
PAX6-235ENST00000638629.12844286aaENSP00000490971.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:2
PAX6-272ENST00000640610.12730422aaENSP00000491295.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
PAX6-258ENST00000639916.12622422aaENSP00000490963.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
PAX6-207ENST00000379129.72614436aaENSP00000368424.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
PAX6-202ENST00000379107.72579436aaENSP00000368401.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
PAX6-208ENST00000379132.82576422aaENSP00000368427.2
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:5
PAX6-281ENST00000640975.12553436aaENSP00000491872.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
PAX6-256ENST00000639409.12450436aaENSP00000492476.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
PAX6-248ENST00000639034.21794401aaENSP00000491679.1
 
Protein coding
CCDS86190D1KF47 -GENCODE basicTSL:5
PAX6-201ENST00000241001.131736422aaENSP00000241001.8
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
PAX6-217ENST00000481563.61587286aaENSP00000492205.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
PAX6-257ENST00000639548.11417286aaENSP00000491944.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
PAX6-263ENST00000640125.11375286aaENSP00000492166.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
PAX6-252ENST00000639109.12734277aaENSP00000491904.1
 
Protein coding
-A0A1W2PQ31 -TSL:5CDS 3' incomplete
PAX6-251ENST00000639079.12608263aaENSP00000492129.1
 
Protein coding
-A0A1W2PQJ8 -TSL:5CDS 3' incomplete
PAX6-260ENST00000639943.12584314aaENSP00000491229.1
 
Protein coding
-A0A1W2PPM5 -TSL:5CDS 3' incomplete
PAX6-239ENST00000638762.12580238aaENSP00000491517.1
 
Protein coding
-A0A1W2PPG3 -TSL:5CDS 3' incomplete
PAX6-236ENST00000638685.12372302aaENSP00000492316.1
 
Protein coding
-A0A1W2PRH6 -GENCODE basicTSL:5
PAX6-279ENST00000640872.12367281aaENSP00000491065.1
 
Protein coding
-A0A1W2PNS7 -TSL:1CDS 3' incomplete
PAX6-219ENST00000524853.62221417aaENSP00000431585.2
 
Protein coding
-E9PKM0 -TSL:5CDS 3' incomplete
PAX6-261ENST00000639950.12133419aaENSP00000491862.1
 
Protein coding
-A0A1W2PQA8 -TSL:5CDS 3' incomplete
PAX6-270ENST00000640431.12037370aaENSP00000491779.1
 
Protein coding
-A0A1W2PQL7 -TSL:5CDS 3' incomplete
PAX6-206ENST00000379123.101923282aaENSP00000368418.6
 
Protein coding
-A0A1W2PPJ2 -TSL:5CDS 3' incomplete
PAX6-234ENST00000638346.11863260aaENSP00000491267.1
 
Protein coding
-A0A1W2PP27 -TSL:5CDS 3' incomplete
PAX6-277ENST00000640766.11797283aaENSP00000491214.1
 
Protein coding
-A0A1W2PPH0 -TSL:5CDS 3' incomplete
PAX6-271ENST00000640460.11736413aaENSP00000492802.1
 
Protein coding
-A0A1W2PSA8 -TSL:5CDS 3' incomplete
PAX6-204ENST00000379111.71718419aaENSP00000368406.3
 
Protein coding
-A0A1W2PQA8 -TSL:5CDS 3' incomplete
PAX6-245ENST00000638963.11580473aaENSP00000491948.1
 
Protein coding
-A0A1W2PQG7 -GENCODE basicTSL:5
PAX6-275ENST00000640684.11557415aaENSP00000491492.1
 
Protein coding
-A0A1W2PPN2 -GENCODE basicTSL:5
PAX6-205ENST00000379115.91531335aaENSP00000368410.5
 
Protein coding
-A0A1X7SBT0 -TSL:5CDS 3' incomplete
PAX6-273ENST00000640613.11525368aaENSP00000492587.1
 
Protein coding
-A0A1W2PRG3 -TSL:5CDS 3' incomplete
PAX6-210ENST00000423822.71521367aaENSP00000388132.3
 
Protein coding
-B1B1I9 -TSL:5CDS 3' incomplete
PAX6-247ENST00000639006.11507249aaENSP00000491210.1
 
Protein coding
-A0A1W2PP89 -TSL:5CDS 3' incomplete
PAX6-240ENST00000638802.11505263aaENSP00000492437.1
 
Protein coding
-A0A1W2PRU4 -TSL:5CDS 3' incomplete
PAX6-267ENST00000640287.11485422aaENSP00000492822.1
 
Protein coding
-P26367-1 -TSL:1CDS 3' incomplete
PAX6-232ENST00000638250.11483282aaENSP00000491365.1
 
Protein coding
-A0A1W2PPJ2 -TSL:5CDS 3' incomplete
PAX6-250ENST00000639061.11473283aaENSP00000491324.1
 
Protein coding
-A0A1W2PPH0 -TSL:5CDS 3' incomplete
PAX6-211ENST00000438681.61395320aaENSP00000404356.2
 
Protein coding
-B1B1I8 -TSL:5CDS 3' incomplete
PAX6-242ENST00000638878.11369231aaENSP00000492081.1
 
Protein coding
-A0A1W2PQG3 -TSL:5CDS 3' incomplete
PAX6-265ENST00000640242.11298341aaENSP00000492409.1
 
Protein coding
-A0A1W2PRS6 -TSL:5CDS 3' incomplete
PAX6-280ENST00000640963.11267382aaENSP00000492397.1
 
Protein coding
-A0A1W2PRA4 -TSL:5CDS 3' incomplete
PAX6-241ENST00000638853.11248277aaENSP00000491280.1
 
Protein coding
-A0A1W2PQ31 -TSL:5CDS 3' incomplete
PAX6-237ENST00000638696.11203400aaENSP00000492756.1
 
Protein coding
-A0A1W2PS91 -GENCODE basicTSL:5
PAX6-212ENST00000455099.61202241aaENSP00000397384.2
 
Protein coding
-B1B1J0 -TSL:5CDS 3' incomplete
PAX6-238ENST00000638755.11161386aaENSP00000492181.1
 
Protein coding
-A0A1W2PQM7 -GENCODE basicTSL:5
PAX6-246ENST00000638965.1979221aaENSP00000492769.1
 
Protein coding
-A0A1W2PSB5 -GENCODE basicTSL:5
PAX6-268ENST00000640335.1964205aaENSP00000492808.1
 
Protein coding
-A0A1W2PRW7 -TSL:5CDS 3' incomplete
PAX6-220ENST00000525535.28753aaENSP00000436365.2
 
Protein coding
---TSL:5CDS 3' incomplete
PAX6-259ENST00000639920.167672aaENSP00000492111.1
 
Protein coding
-A0A1W2PR58 -TSL:5CDS 3' incomplete
PAX6-255ENST00000639394.11988163aaENSP00000492177.1
 
Nonsense mediated decay
-A0A1W2PQW3 -TSL:5
PAX6-227ENST00000533156.2848No protein-
 
Processed transcript
---TSL:5
PAX6-213ENST00000464174.6846No protein-
 
Processed transcript
---TSL:5
PAX6-222ENST00000530373.6785No protein-
 
Processed transcript
---TSL:5
PAX6-223ENST00000530714.6650No protein-
 
Processed transcript
---TSL:5
PAX6-266ENST00000640251.1649No protein-
 
Processed transcript
---TSL:5
PAX6-229ENST00000534353.5540No protein-
 
Processed transcript
---TSL:4
PAX6-253ENST00000639203.1532No protein-
 
Processed transcript
---TSL:5
PAX6-233ENST00000638278.1417No protein-
 
Processed transcript
---TSL:NA
PAX6-274ENST00000640617.1412No protein-
 
Processed transcript
---TSL:4
PAX6-278ENST00000640819.1368No protein-
 
Processed transcript
---TSL:5
PAX6-228ENST00000533333.56173No protein-
 
Retained intron
---TSL:2
PAX6-216ENST00000474783.24392No protein-
 
Retained intron
---TSL:5
PAX6-214ENST00000470027.73587No protein-
 
Retained intron
---TSL:2
PAX6-264ENST00000640172.12525No protein-
 
Retained intron
---TSL:5
PAX6-215ENST00000471303.62423No protein-
 
Retained intron
---TSL:5
PAX6-243ENST00000638913.12390No protein-
 
Retained intron
---TSL:5
PAX6-249ENST00000639054.12254No protein-
 
Retained intron
---TSL:5
PAX6-276ENST00000640735.12060No protein-
 
Retained intron
---TSL:5
PAX6-224ENST00000531910.61958No protein-
 
Retained intron
---TSL:5
PAX6-218ENST00000494377.71911No protein-
 
Retained intron
---TSL:5
PAX6-230ENST00000534390.21084No protein-
 
Retained intron
---TSL:5
PAX6-262ENST00000640038.1781No protein-
 
Retained intron
---TSL:2
PAX6-226ENST00000532916.5627No protein-
 
Retained intron
---TSL:3
PAX6-225ENST00000532175.5524No protein-
 
Retained intron
---TSL:3
PAX6-221ENST00000527769.5487No protein-
 
Retained intron
---TSL:3
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PVT1-224ENST00000651587.12444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
PVT1-293ENST00000660438.12450No protein-
 
lncRNA
--GENCODE basic
PVT1-216ENST00000523068.22255No protein-
 
lncRNA
--GENCODE basicTSL:5
PVT1-323ENST00000664995.12230No protein-
 
lncRNA
--GENCODE basic
PVT1-283ENST00000659106.12187No protein-
 
lncRNA
---
PVT1-295ENST00000660631.12161No protein-
 
lncRNA
---
PVT1-265ENST00000657449.12149No protein-
 
lncRNA
--GENCODE basic
PVT1-347ENST00000667418.12143No protein-
 
lncRNA
--GENCODE basic
PVT1-336ENST00000666147.12097No protein-
 
lncRNA
---
PVT1-254ENST00000656693.11990No protein-
 
lncRNA
--GENCODE basic
PVT1-351ENST00000668098.11985No protein-
 
lncRNA
---
PVT1-331ENST00000665856.11965No protein-
 
lncRNA
--GENCODE basic
PVT1-253ENST00000656532.11909No protein-
 
lncRNA
---
PVT1-368ENST00000670532.11840No protein-
 
lncRNA
--GENCODE basic
PVT1-294ENST00000660456.11814No protein-
 
lncRNA
---
PVT1-372ENST00000670714.11756No protein-
 
lncRNA
---
PVT1-288ENST00000659912.11744No protein-
 
lncRNA
---
PVT1-282ENST00000658840.11738No protein-
 
lncRNA
--GENCODE basic
PVT1-308ENST00000662413.11727No protein-
 
lncRNA
---
PVT1-317ENST00000664265.11720No protein-
 
lncRNA
--GENCODE basic
PVT1-284ENST00000659326.11706No protein-
 
lncRNA
--GENCODE basic
PVT1-346ENST00000667305.11701No protein-
 
lncRNA
---
PVT1-203ENST00000513868.61699No protein-
 
lncRNA
--GENCODE basicTSL:1
PVT1-263ENST00000657356.11697No protein-
 
lncRNA
--GENCODE basic
PVT1-357ENST00000668619.11685No protein-
 
lncRNA
---
PVT1-307ENST00000662410.11668No protein-
 
lncRNA
---
PVT1-349ENST00000667630.11634No protein-
 
lncRNA
---
PVT1-340ENST00000666776.11628No protein-
 
lncRNA
--GENCODE basic
PVT1-215ENST00000522963.61619No protein-
 
lncRNA
--GENCODE basicTSL:4
PVT1-229ENST00000652816.11610No protein-
 
lncRNA
---
PVT1-366ENST00000670204.11600No protein-
 
lncRNA
--GENCODE basic
PVT1-250ENST00000656402.11585No protein-
 
lncRNA
---
PVT1-261ENST00000657289.11581No protein-
 
lncRNA
---
PVT1-305ENST00000661988.11580No protein-
 
lncRNA
---
PVT1-210ENST00000521122.21578No protein-
 
lncRNA
--GENCODE basicTSL:3
PVT1-341ENST00000666777.11555No protein-
 
lncRNA
---
PVT1-300ENST00000661160.11546No protein-
 
lncRNA
---
PVT1-212ENST00000521951.11535No protein-
 
lncRNA
--TSL:1
PVT1-286ENST00000659666.11533No protein-
 
lncRNA
--GENCODE basic
PVT1-303ENST00000661625.11519No protein-
 
lncRNA
--GENCODE basic
PVT1-362ENST00000669416.11516No protein-
 
lncRNA
---
PVT1-205ENST00000517790.21513No protein-
 
lncRNA
--TSL:2
PVT1-258ENST00000657112.11499No protein-
 
lncRNA
---
PVT1-304ENST00000661830.11490No protein-
 
lncRNA
---
PVT1-237ENST00000653853.11490No protein-
 
lncRNA
---
PVT1-364ENST00000669951.11485No protein-
 
lncRNA
---
PVT1-242ENST00000654369.11482No protein-
 
lncRNA
---
PVT1-334ENST00000666080.11481No protein-
 
lncRNA
---
PVT1-312ENST00000663461.11471No protein-
 
lncRNA
---
PVT1-344ENST00000667149.11463No protein-
 
lncRNA
---
PVT1-240ENST00000654105.11460No protein-
 
lncRNA
---
PVT1-268ENST00000657596.11455No protein-
 
lncRNA
---
PVT1-266ENST00000657451.11454No protein-
 
lncRNA
---
PVT1-301ENST00000661205.11449No protein-
 
lncRNA
---
PVT1-352ENST00000668123.11433No protein-
 
lncRNA
---
PVT1-360ENST00000669272.11417No protein-
 
lncRNA
---
PVT1-241ENST00000654324.11411No protein-
 
lncRNA
---
PVT1-330ENST00000665737.11410No protein-
 
lncRNA
---
PVT1-279ENST00000658350.11402No protein-
 
lncRNA
---
PVT1-319ENST00000664299.11396No protein-
 
lncRNA
---
PVT1-375ENST00000671092.11393No protein-
 
lncRNA
---
PVT1-269ENST00000657667.11378No protein-
 
lncRNA
---
PVT1-285ENST00000659625.11363No protein-
 
lncRNA
---
PVT1-260ENST00000657211.11353No protein-
 
lncRNA
---
PVT1-373ENST00000670795.11348No protein-
 
lncRNA
---
PVT1-311ENST00000663059.11330No protein-
 
lncRNA
---
PVT1-238ENST00000653990.11329No protein-
 
lncRNA
---
PVT1-367ENST00000670223.11321No protein-
 
lncRNA
---
PVT1-257ENST00000656999.11314No protein-
 
lncRNA
---
PVT1-338ENST00000666353.11312No protein-
 
lncRNA
---
PVT1-239ENST00000654091.11311No protein-
 
lncRNA
---
PVT1-251ENST00000656411.11281No protein-
 
lncRNA
---
PVT1-358ENST00000669082.11280No protein-
 
lncRNA
---
PVT1-233ENST00000653497.11278No protein-
 
lncRNA
---
PVT1-234ENST00000653522.11275No protein-
 
lncRNA
---
PVT1-350ENST00000667714.11269No protein-
 
lncRNA
---
PVT1-236ENST00000653845.11262No protein-
 
lncRNA
---
PVT1-267ENST00000657517.11253No protein-
 
lncRNA
---
PVT1-318ENST00000664293.11206No protein-
 
lncRNA
---
PVT1-314ENST00000663753.11206No protein-
 
lncRNA
---
PVT1-321ENST00000664742.11200No protein-
 
lncRNA
---
PVT1-290ENST00000660122.11199No protein-
 
lncRNA
---
PVT1-204ENST00000517525.21194No protein-
 
lncRNA
--TSL:3
PVT1-374ENST00000671088.11191No protein-
 
lncRNA
---
PVT1-259ENST00000657183.11172No protein-
 
lncRNA
--GENCODE basic
PVT1-252ENST00000656491.11167No protein-
 
lncRNA
---
PVT1-281ENST00000658556.11163No protein-
 
lncRNA
---
PVT1-329ENST00000665721.11162No protein-
 
lncRNA
---
PVT1-359ENST00000669132.11156No protein-
 
lncRNA
---
PVT1-310ENST00000662766.11152No protein-
 
lncRNA
---
PVT1-292ENST00000660200.11139No protein-
 
lncRNA
--GENCODE basic
PVT1-306ENST00000662061.11139No protein-
 
lncRNA
---
PVT1-213ENST00000522414.21132No protein-
 
lncRNA
--TSL:2
PVT1-298ENST00000660896.11128No protein-
 
lncRNA
---
PVT1-227ENST00000652695.11126No protein-
 
lncRNA
---
PVT1-370ENST00000670602.11124No protein-
 
lncRNA
---
PVT1-246ENST00000655783.11118No protein-
 
lncRNA
---
PVT1-220ENST00000524165.61114No protein-
 
lncRNA
--TSL:2
PVT1-320ENST00000664610.11114No protein-
 
lncRNA
---
PVT1-371ENST00000670626.11114No protein-
 
lncRNA
---
PVT1-202ENST00000512617.71109No protein-
 
lncRNA
--TSL:3
PVT1-247ENST00000656077.11109No protein-
 
lncRNA
--GENCODE basic
PVT1-326ENST00000665246.11096No protein-
 
lncRNA
---
PVT1-355ENST00000668479.11091No protein-
 
lncRNA
---
PVT1-264ENST00000657384.11068No protein-
 
lncRNA
---
PVT1-363ENST00000669509.11066No protein-
 
lncRNA
---
PVT1-333ENST00000666076.11062No protein-
 
lncRNA
---
PVT1-218ENST00000523328.61047No protein-
 
lncRNA
--TSL:1
PVT1-348ENST00000667539.11041No protein-
 
lncRNA
---
PVT1-315ENST00000664139.11036No protein-
 
lncRNA
---
PVT1-221ENST00000650846.11020No protein-
 
lncRNA
---
PVT1-342ENST00000666842.11019No protein-
 
lncRNA
---
PVT1-226ENST00000652492.11017No protein-
 
lncRNA
--GENCODE basic
PVT1-255ENST00000656880.11017No protein-
 
lncRNA
---
PVT1-201ENST00000504719.71017No protein-
 
lncRNA
--TSL:2
PVT1-208ENST00000519481.61010No protein-
 
lncRNA
--TSL:2
PVT1-339ENST00000666452.11001No protein-
 
lncRNA
---
PVT1-328ENST00000665698.11000No protein-
 
lncRNA
---
PVT1-207ENST00000518528.2995No protein-
 
lncRNA
--TSL:3
PVT1-245ENST00000655594.1978No protein-
 
lncRNA
---
PVT1-271ENST00000657693.1977No protein-
 
lncRNA
---
PVT1-223ENST00000651568.1971No protein-
 
lncRNA
--GENCODE basic
PVT1-324ENST00000665166.1965No protein-
 
lncRNA
---
PVT1-325ENST00000665175.1964No protein-
 
lncRNA
---
PVT1-217ENST00000523190.6963No protein-
 
lncRNA
--TSL:3
PVT1-337ENST00000666223.1963No protein-
 
lncRNA
---
PVT1-356ENST00000668480.1956No protein-
 
lncRNA
---
PVT1-249ENST00000656396.1938No protein-
 
lncRNA
---
PVT1-248ENST00000656168.1935No protein-
 
lncRNA
--GENCODE basic
PVT1-302ENST00000661391.1924No protein-
 
lncRNA
---
PVT1-214ENST00000522875.5922No protein-
 
lncRNA
--TSL:5
PVT1-225ENST00000651664.1914No protein-
 
lncRNA
---
PVT1-276ENST00000658158.1909No protein-
 
lncRNA
--GENCODE basic
PVT1-262ENST00000657297.1907No protein-
 
lncRNA
---
PVT1-235ENST00000653608.1906No protein-
 
lncRNA
---
PVT1-256ENST00000656948.1904No protein-
 
lncRNA
---
PVT1-345ENST00000667204.1897No protein-
 
lncRNA
---
PVT1-361ENST00000669407.1890No protein-
 
lncRNA
---
PVT1-322ENST00000664924.1886No protein-
 
lncRNA
---
PVT1-369ENST00000670535.1876No protein-
 
lncRNA
---
PVT1-289ENST00000660069.1870No protein-
 
lncRNA
---
PVT1-231ENST00000652993.1866No protein-
 
lncRNA
---
PVT1-316ENST00000664214.1861No protein-
 
lncRNA
---
PVT1-309ENST00000662709.1858No protein-
 
lncRNA
---
PVT1-243ENST00000655099.1855No protein-
 
lncRNA
---
PVT1-297ENST00000660781.1854No protein-
 
lncRNA
---
PVT1-219ENST00000523427.2837No protein-
 
lncRNA
--TSL:3
PVT1-209ENST00000520913.2835No protein-
 
lncRNA
--TSL:2
PVT1-343ENST00000666878.1830No protein-
 
lncRNA
---
PVT1-230ENST00000652883.1821No protein-
 
lncRNA
---
PVT1-206ENST00000517838.6821No protein-
 
lncRNA
--TSL:2
PVT1-274ENST00000658018.1820No protein-
 
lncRNA
---
PVT1-228ENST00000652728.1812No protein-
 
lncRNA
---
PVT1-376ENST00000671587.1803No protein-
 
lncRNA
---
PVT1-287ENST00000659892.1782No protein-
 
lncRNA
---
PVT1-222ENST00000650930.1777No protein-
 
lncRNA
---
PVT1-291ENST00000660146.1764No protein-
 
lncRNA
---
PVT1-327ENST00000665372.1762No protein-
 
lncRNA
---
PVT1-280ENST00000658429.1760No protein-
 
lncRNA
---
PVT1-354ENST00000668351.1759No protein-
 
lncRNA
---
PVT1-299ENST00000660912.1754No protein-
 
lncRNA
---
PVT1-275ENST00000658065.1745No protein-
 
lncRNA
---
PVT1-244ENST00000655148.1724No protein-
 
lncRNA
---
PVT1-273ENST00000657945.1678No protein-
 
lncRNA
---
PVT1-296ENST00000660659.1673No protein-
 
lncRNA
---
PVT1-278ENST00000658305.1641No protein-
 
lncRNA
---
PVT1-232ENST00000653406.1619No protein-
 
lncRNA
---
PVT1-313ENST00000663715.1615No protein-
 
lncRNA
---
PVT1-270ENST00000657682.1611No protein-
 
lncRNA
---
PVT1-272ENST00000657844.1609No protein-
 
lncRNA
---
PVT1-335ENST00000666105.1608No protein-
 
lncRNA
---
PVT1-353ENST00000668215.1590No protein-
 
lncRNA
---
PVT1-332ENST00000666039.1520No protein-
 
lncRNA
---
PVT1-365ENST00000670009.1456No protein-
 
lncRNA
---
PVT1-277ENST00000658242.1432No protein-
 
lncRNA
---
PVT1-211ENST00000521600.5408No protein-
 
lncRNA
--TSL:2
Description

valosin containing protein [Source:HGNC Symbol;Acc:HGNC:12666]

Gene Synonyms

CDC48, IBMPFD, TERA, p97

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VCP-201ENST00000358901.113746806aaENSP00000351777.6
 
Protein coding
CCDS6573P55072 V9HW80 NM_007126.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VCP-221ENST00000679902.16033772aaENSP00000506338.1
 
Protein coding
---GENCODE basic
VCP-209ENST00000677257.14404804aaENSP00000504354.1
 
Protein coding
---GENCODE basicAPPRIS ALT1
VCP-212ENST00000678650.14362761aaENSP00000503426.1
 
Protein coding
---GENCODE basic
VCP-203ENST00000448530.63849761aaENSP00000392088.2
 
Protein coding
-C9IZA5 -GENCODE basicTSL:5
VCP-202ENST00000417448.23382761aaENSP00000399456.2
 
Protein coding
-C9JUP7 -GENCODE basicTSL:3
VCP-219ENST00000679862.13159760aaENSP00000504990.1
 
Protein coding
---GENCODE basic
VCP-231ENST00000681335.13077754aaENSP00000505230.1
 
Protein coding
---GENCODE basic
VCP-217ENST00000679647.12895733aaENSP00000506216.1
 
Protein coding
---GENCODE basic
VCP-233ENST00000681537.1130376aaENSP00000505847.1
 
Protein coding
---CDS 5' incomplete
VCP-227ENST00000680834.1709237aaENSP00000506387.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-232ENST00000681386.146255aaENSP00000505509.1
 
Protein coding
---CDS 3' incomplete
VCP-234ENST00000681562.1328110aaENSP00000505893.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-215ENST00000679449.1321107aaENSP00000506658.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-228ENST00000680900.1306102aaENSP00000505674.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-210ENST00000678018.1448043aaENSP00000503811.1
 
Nonsense mediated decay
----
VCP-211ENST00000678465.14451334aaENSP00000504259.1
 
Nonsense mediated decay
----
VCP-229ENST00000680916.13264694aaENSP00000505769.1
 
Nonsense mediated decay
----
VCP-213ENST00000679204.22987458aaENSP00000503131.2
 
Nonsense mediated decay
----
VCP-222ENST00000680079.180956aaENSP00000506523.1
 
Nonsense mediated decay
----
VCP-224ENST00000680520.146377aaENSP00000505308.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-230ENST00000681125.144147aaENSP00000505052.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-226ENST00000680731.143677aaENSP00000505497.1
 
Nonsense mediated decay
----
VCP-236ENST00000681789.136450aaENSP00000505142.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-225ENST00000680575.1510No protein-
 
Processed transcript
----
VCP-220ENST00000679901.1458No protein-
 
Processed transcript
----
VCP-223ENST00000680108.1415No protein-
 
Processed transcript
----
VCP-214ENST00000679392.1271No protein-
 
Processed transcript
----
VCP-216ENST00000679599.15506No protein-
 
Retained intron
----
VCP-235ENST00000681690.14691No protein-
 
Retained intron
----
VCP-218ENST00000679800.14561No protein-
 
Retained intron
----
VCP-208ENST00000676836.23597No protein-
 
Retained intron
----
VCP-207ENST00000493886.52942No protein-
 
Retained intron
---TSL:2
VCP-206ENST00000480327.22162No protein-
 
Retained intron
---TSL:5
VCP-205ENST00000479300.21159No protein-
 
Retained intron
---TSL:1
VCP-204ENST00000466100.1508No protein-
 
Retained intron
---TSL:2
Description

spectrin repeat containing nuclear envelope protein 1 [Source:HGNC Symbol;Acc:HGNC:17089]

Gene Synonyms

8B, ARCA1, C6orf98, CPG2, KIAA0796, MYNE1, Nesp1, Nesprin-1, SCAR8, SYNE-1B, dJ45H2.2, enaptin

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SYNE1-206ENST00000367255.10277088797aaENSP00000356224.5
 
Protein coding
CCDS5236Q8NF91-1 NM_182961.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
SYNE1-211ENST00000423061.6274758749aaENSP00000396024.1
 
Protein coding
CCDS5235A0A0C4DG40 -GENCODE basicAPPRIS ALT2TSL:1
SYNE1-202ENST00000354674.53785975aaENSP00000346701.4
 
Protein coding
CCDS87458F8WAI0 NM_001347702.2MANE Plus Clinical v0.93GENCODE basicTSL:5
SYNE1-203ENST00000367248.771651433aaENSP00000356217.3
 
Protein coding
-F5GXQ8 -GENCODE basicTSL:5
SYNE1-241ENST00000672122.166601424aaENSP00000500559.1
 
Protein coding
-A0A5F9ZHR3 -GENCODE basic
SYNE1-204ENST00000367251.758371654aaENSP00000356220.3
 
Protein coding
-H0Y325 -TSL:1CDS 5' incomplete
SYNE1-205ENST00000367253.851891725aaENSP00000356222.4
 
Protein coding
-Q8NF91-6 -GENCODE basicTSL:5
SYNE1-208ENST00000367257.850221355aaENSP00000356226.4
 
Protein coding
-H0Y326 -TSL:5CDS 5' incomplete
SYNE1-210ENST00000413186.648601443aaENSP00000414510.2
 
Protein coding
-Q8NF91-5 -GENCODE basicTSL:5
SYNE1-246ENST00000673281.147701528aaENSP00000500893.1
 
Protein coding
-A0A5F9ZI52 -CDS 3' incomplete
SYNE1-240ENST00000671915.13779542aaENSP00000500319.1
 
Protein coding
-A0A5F9ZHI3 -CDS 5' incomplete
SYNE1-236ENST00000539504.53768952aaENSP00000441052.1
 
Protein coding
-Q5JV20 -GENCODE basicTSL:5
SYNE1-235ENST00000537750.52850615aaENSP00000441264.1
 
Protein coding
-F5GYQ7 -TSL:5CDS 3' incomplete
SYNE1-232ENST00000535896.72802752aaENSP00000500235.1
 
Protein coding
-A0A5F9ZHD7 -GENCODE basicTSL:5
SYNE1-243ENST00000672169.12789635aaENSP00000500287.1
 
Protein coding
-A0A5F9ZHE1 -CDS 5' incomplete
SYNE1-239ENST00000610489.22688494aaENSP00000481873.2
 
Protein coding
-A0A087WYJ5 I6XKI8 -GENCODE basicTSL:5
SYNE1-245ENST00000673173.12663591aaENSP00000500180.1
 
Protein coding
-A0A5F9ZHB2 -CDS 5' incomplete
SYNE1-216ENST00000466159.62610754aaENSP00000446021.1
 
Protein coding
-F5H4Q0 -GENCODE basicTSL:1
SYNE1-242ENST00000672154.12350510aaENSP00000500128.1
 
Protein coding
-A0A5F9ZH86 -CDS 5' incomplete
SYNE1-229ENST00000495090.61907612aaENSP00000438508.1
 
Protein coding
-F5H422 -GENCODE basicTSL:1
SYNE1-213ENST00000454018.71549511aaENSP00000390858.4
 
Protein coding
-A0A0C4DH48 -TSL:1CDS 5' incomplete
SYNE1-237ENST00000540663.5776242aaENSP00000437411.1
 
Protein coding
-F5H6R8 -TSL:4CDS 3' incomplete
SYNE1-234ENST00000537033.1647195aaENSP00000443879.1
 
Protein coding
-F5GZ83 -TSL:4CDS 3' incomplete
SYNE1-218ENST00000469439.1630207aaENSP00000442805.1
 
Protein coding
-H0YGD3 -TSL:3CDS 5' incomplete
SYNE1-244ENST00000673163.1552836aaENSP00000499934.1
 
Nonsense mediated decay
-A0A5F9ZH00 --
SYNE1-247ENST00000673451.12851542aaENSP00000500189.1
 
Nonsense mediated decay
-A0A5F9ZH87 -CDS 5' incomplete
SYNE1-221ENST00000474655.6179862aaENSP00000440193.1
 
Nonsense mediated decay
-H0YFT4 -TSL:1CDS 5' incomplete
SYNE1-201ENST00000347037.93798No protein-
 
Processed transcript
---TSL:1
SYNE1-214ENST00000460912.63664No protein-
 
Processed transcript
---TSL:1
SYNE1-233ENST00000536990.53003No protein-
 
Processed transcript
---TSL:2
SYNE1-224ENST00000481502.5585No protein-
 
Processed transcript
---TSL:3
SYNE1-222ENST00000476519.1582No protein-
 
Processed transcript
---TSL:4
SYNE1-230ENST00000498751.1578No protein-
 
Processed transcript
---TSL:4
SYNE1-207ENST00000367256.910742No protein-
 
Retained intron
---TSL:1
SYNE1-209ENST00000409694.610634No protein-
 
Retained intron
---TSL:1
SYNE1-215ENST00000461872.610075No protein-
 
Retained intron
---TSL:1
SYNE1-223ENST00000478916.57780No protein-
 
Retained intron
---TSL:2
SYNE1-219ENST00000471834.17229No protein-
 
Retained intron
---TSL:1
SYNE1-227ENST00000490135.65707No protein-
 
Retained intron
---TSL:1
SYNE1-226ENST00000489156.11891No protein-
 
Retained intron
---TSL:1
SYNE1-251ENST00000684643.11629No protein-
 
Retained intron
----
SYNE1-250ENST00000684208.11540No protein-
 
Retained intron
----
SYNE1-249ENST00000682252.11540No protein-
 
Retained intron
----
SYNE1-212ENST00000448038.31275No protein-
 
Retained intron
---TSL:5
SYNE1-248ENST00000682179.1868No protein-
 
Retained intron
----
SYNE1-217ENST00000468937.2688No protein-
 
Retained intron
---TSL:2
SYNE1-228ENST00000490866.2581No protein-
 
Retained intron
---TSL:2
SYNE1-231ENST00000535081.1561No protein-
 
Retained intron
---TSL:2
SYNE1-238ENST00000545694.1526No protein-
 
Retained intron
---TSL:3
SYNE1-220ENST00000472563.2525No protein-
 
Retained intron
---TSL:2
SYNE1-225ENST00000488376.2414No protein-
 
Retained intron
---TSL:2
Description

NSE4 homolog A, SMC5-SMC6 complex component [Source:HGNC Symbol;Acc:HGNC:25935]

Gene Synonyms

C10orf86, FLJ20003, NSE4A, bA500G22.3

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
NSMCE4A-202ENST00000369023.81391385aaENSP00000358019.3
 
Protein coding
CCDS7624Q9NXX6-1 NM_017615.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
NSMCE4A-201ENST00000369017.51224316aaENSP00000358013.5
 
Protein coding
-Q9NXX6-2 -GENCODE basicTSL:1
NSMCE4A-211ENST00000489266.52399No protein-
 
Processed transcript
---TSL:1
NSMCE4A-206ENST00000468209.51041No protein-
 
Processed transcript
---TSL:3
NSMCE4A-204ENST00000464321.5822No protein-
 
Processed transcript
---TSL:5
NSMCE4A-207ENST00000472431.1819No protein-
 
Processed transcript
---TSL:3
NSMCE4A-203ENST00000459911.5541No protein-
 
Processed transcript
---TSL:2
NSMCE4A-205ENST00000465189.1440No protein-
 
Processed transcript
---TSL:5
NSMCE4A-209ENST00000481320.51345No protein-
 
Retained intron
---TSL:2
NSMCE4A-210ENST00000483541.1694No protein-
 
Retained intron
---TSL:3
NSMCE4A-208ENST00000477289.1643No protein-
 
Retained intron
---TSL:2
Description

valosin containing protein [Source:HGNC Symbol;Acc:HGNC:12666]

Gene Synonyms

CDC48, IBMPFD, TERA, p97

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VCP-201ENST00000358901.113746806aaENSP00000351777.6
 
Protein coding
CCDS6573P55072 V9HW80 NM_007126.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VCP-221ENST00000679902.16033772aaENSP00000506338.1
 
Protein coding
---GENCODE basic
VCP-209ENST00000677257.14404804aaENSP00000504354.1
 
Protein coding
---GENCODE basicAPPRIS ALT1
VCP-212ENST00000678650.14362761aaENSP00000503426.1
 
Protein coding
---GENCODE basic
VCP-203ENST00000448530.63849761aaENSP00000392088.2
 
Protein coding
-C9IZA5 -GENCODE basicTSL:5
VCP-202ENST00000417448.23382761aaENSP00000399456.2
 
Protein coding
-C9JUP7 -GENCODE basicTSL:3
VCP-219ENST00000679862.13159760aaENSP00000504990.1
 
Protein coding
---GENCODE basic
VCP-231ENST00000681335.13077754aaENSP00000505230.1
 
Protein coding
---GENCODE basic
VCP-217ENST00000679647.12895733aaENSP00000506216.1
 
Protein coding
---GENCODE basic
VCP-233ENST00000681537.1130376aaENSP00000505847.1
 
Protein coding
---CDS 5' incomplete
VCP-227ENST00000680834.1709237aaENSP00000506387.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-232ENST00000681386.146255aaENSP00000505509.1
 
Protein coding
---CDS 3' incomplete
VCP-234ENST00000681562.1328110aaENSP00000505893.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-215ENST00000679449.1321107aaENSP00000506658.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-228ENST00000680900.1306102aaENSP00000505674.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-210ENST00000678018.1448043aaENSP00000503811.1
 
Nonsense mediated decay
----
VCP-211ENST00000678465.14451334aaENSP00000504259.1
 
Nonsense mediated decay
----
VCP-229ENST00000680916.13264694aaENSP00000505769.1
 
Nonsense mediated decay
----
VCP-213ENST00000679204.22987458aaENSP00000503131.2
 
Nonsense mediated decay
----
VCP-222ENST00000680079.180956aaENSP00000506523.1
 
Nonsense mediated decay
----
VCP-224ENST00000680520.146377aaENSP00000505308.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-230ENST00000681125.144147aaENSP00000505052.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-226ENST00000680731.143677aaENSP00000505497.1
 
Nonsense mediated decay
----
VCP-236ENST00000681789.136450aaENSP00000505142.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-225ENST00000680575.1510No protein-
 
Processed transcript
----
VCP-220ENST00000679901.1458No protein-
 
Processed transcript
----
VCP-223ENST00000680108.1415No protein-
 
Processed transcript
----
VCP-214ENST00000679392.1271No protein-
 
Processed transcript
----
VCP-216ENST00000679599.15506No protein-
 
Retained intron
----
VCP-235ENST00000681690.14691No protein-
 
Retained intron
----
VCP-218ENST00000679800.14561No protein-
 
Retained intron
----
VCP-208ENST00000676836.23597No protein-
 
Retained intron
----
VCP-207ENST00000493886.52942No protein-
 
Retained intron
---TSL:2
VCP-206ENST00000480327.22162No protein-
 
Retained intron
---TSL:5
VCP-205ENST00000479300.21159No protein-
 
Retained intron
---TSL:1
VCP-204ENST00000466100.1508No protein-
 
Retained intron
---TSL:2
Description

c-src tyrosine kinase [Source:MGI Symbol;Acc:MGI:88537]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Csk-201ENSMUST00000034863.82749450aaENSMUSP00000034863.7
 
Protein coding
CCDS23228P41241 GENCODE basicAPPRIS P1TSL:1
Csk-204ENSMUST00000215396.22390450aaENSMUSP00000150590.2
 
Protein coding
CCDS23228P41241 GENCODE basicAPPRIS P1TSL:1
Csk-209ENSMUST00000217314.22162450aaENSMUSP00000150984.2
 
Protein coding
CCDS23228P41241 GENCODE basicAPPRIS P1TSL:1
Csk-206ENSMUST00000216934.2554108aaENSMUSP00000149308.2
 
Protein coding
-A0A1L1SR46 TSL:2CDS 3' incomplete
Csk-208ENSMUST00000217128.2521139aaENSMUSP00000150240.2
 
Protein coding
-A0A1L1STA1 TSL:2CDS 3' incomplete
Csk-207ENSMUST00000216979.238991aaENSMUSP00000149143.2
 
Protein coding
-A0A1L1SQQ5 TSL:5CDS 3' incomplete
Csk-203ENSMUST00000213943.2393No protein-
 
Processed transcript
--TSL:5
Csk-202ENSMUST00000213660.2652No protein-
 
Retained intron
--TSL:2
Csk-205ENSMUST00000215958.2392No protein-
 
Retained intron
--TSL:3
Description

ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]

Gene Synonyms

ATX2, SCA2, TNRC13

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ATXN2-241ENST00000673436.143471155aaENSP00000500925.1
 
Protein coding
-A0A5F9ZI57 NM_001372574.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2
ATXN2-218ENST00000550104.546481313aaENSP00000446576.2
 
Protein coding
CCDS31902Q99700-1 -GENCODE basicAPPRIS P2TSL:1
ATXN2-226ENST00000616825.445751006aaENSP00000481448.1
 
Protein coding
CCDS81738Q99700-5 -GENCODE basicTSL:5
ATXN2-214ENST00000542287.634431073aaENSP00000445583.2
 
Protein coding
CCDS81739F8VQP2 -GENCODE basicAPPRIS ALT2TSL:1
ATXN2-213ENST00000535949.532051006aaENSP00000439338.1
 
Protein coding
CCDS81738Q99700-5 -GENCODE basicTSL:1
ATXN2-231ENST00000644883.14674957aaENSP00000496279.1
 
Protein coding
-A0A2R8Y7P6 -GENCODE basicAPPRIS ALT2
ATXN2-229ENST00000643669.243801166aaENSP00000494663.1
 
Protein coding
-A0A2R8Y5A6 -GENCODE basicAPPRIS ALT2
ATXN2-225ENST00000608853.543761153aaENSP00000476504.1
 
Protein coding
-V9GY86 -GENCODE basicAPPRIS ALT2TSL:1
ATXN2-238ENST00000672613.143411153aaENSP00000500649.1
 
Protein coding
-V9GY86 -GENCODE basicAPPRIS ALT2
ATXN2-201ENST00000389153.1039411087aaENSP00000373805.6
 
Protein coding
-F8WB06 -GENCODE basicAPPRIS ALT2TSL:5
ATXN2-243ENST00000673557.139261167aaENSP00000500766.1
 
Protein coding
-A0A5F9ZHX3 -GENCODE basicAPPRIS ALT2
ATXN2-242ENST00000673449.137541178aaENSP00000500646.1
 
Protein coding
-A0A5F9ZHW5 -GENCODE basicAPPRIS ALT2
ATXN2-233ENST00000647305.13639968aaENSP00000493897.1
 
Protein coding
-A0A2R8YDM9 -GENCODE basicAPPRIS ALT2
ATXN2-240ENST00000673283.135261065aaENSP00000500313.1
 
Protein coding
-A0A5F9ZHH4 -GENCODE basicAPPRIS ALT2
ATXN2-220ENST00000550844.23104196aaENSP00000447741.3
 
Protein coding
-F8VZC1 -TSL:2CDS 5' incomplete
ATXN2-211ENST00000492467.62996908aaENSP00000447225.4
 
Protein coding
-F8W0B5 -TSL:5CDS 5' incomplete
ATXN2-202ENST00000389154.71794424aaENSP00000373806.4
 
Protein coding
-F8WB05 -TSL:5CDS 5' incomplete
ATXN2-234ENST00000647445.11263298aaENSP00000493566.1
 
Protein coding
-A0A2R8YCG6 -CDS 5' incomplete
ATXN2-228ENST00000643474.1765255aaENSP00000496329.1
 
Protein coding
-A0A2R8YGV1 -CDS 5' and 3' incomplete
ATXN2-219ENST00000550236.1704235aaENSP00000448640.2
 
Protein coding
-F8VRK6 -TSL:5CDS 5' and 3' incomplete
ATXN2-206ENST00000475132.1610119aaENSP00000474645.1
 
Protein coding
-S4R3R6 -TSL:2CDS 5' incomplete
ATXN2-230ENST00000643694.1447149aaENSP00000495833.1
 
Protein coding
-A0A2R8Y6W7 -CDS 5' and 3' incomplete
ATXN2-227ENST00000642389.244381158aaENSP00000496055.2
 
Nonsense mediated decay
-A0A2R8Y7E6 --
ATXN2-209ENST00000483311.64159835aaENSP00000446512.2
 
Nonsense mediated decay
-H0YH87 -TSL:1
ATXN2-239ENST00000673273.11525317aaENSP00000500376.1
 
Nonsense mediated decay
-A0A5F9ZHG6 -CDS 5' incomplete
ATXN2-235ENST00000671792.11239347aaENSP00000500090.1
 
Nonsense mediated decay
-A0A5F9ZH85 -CDS 5' incomplete
ATXN2-223ENST00000551755.6695107aaENSP00000474442.1
 
Nonsense mediated decay
-S4R3J6 -TSL:5CDS 5' incomplete
ATXN2-237ENST00000672335.13797No protein-
 
Processed transcript
----
ATXN2-232ENST00000645162.11444No protein-
 
Processed transcript
----
ATXN2-217ENST00000549455.1568No protein-
 
Processed transcript
---TSL:4
ATXN2-216ENST00000548492.1556No protein-
 
Processed transcript
---TSL:4
ATXN2-207ENST00000481331.1381No protein-
 
Processed transcript
---TSL:3
ATXN2-208ENST00000482777.54369No protein-
 
Retained intron
---TSL:2
ATXN2-203ENST00000392645.62842No protein-
 
Retained intron
---TSL:2
ATXN2-236ENST00000672105.12134No protein-
 
Retained intron
----
ATXN2-215ENST00000546483.12098No protein-
 
Retained intron
---TSL:2
ATXN2-221ENST00000550889.51703No protein-
 
Retained intron
---TSL:2
ATXN2-222ENST00000551551.11256No protein-
 
Retained intron
---TSL:2
ATXN2-205ENST00000471866.5836No protein-
 
Retained intron
---TSL:4
ATXN2-212ENST00000495342.1813No protein-
 
Retained intron
---TSL:3
ATXN2-210ENST00000484991.1793No protein-
 
Retained intron
---TSL:2
ATXN2-204ENST00000468920.2568No protein-
 
Retained intron
---TSL:2
ATXN2-224ENST00000552323.1430No protein-
 
Retained intron
---TSL:3
Description

adhesion G protein-coupled receptor L3 [Source:MGI Symbol;Acc:MGI:2441950]

Gene Synonyms

5430402I23Rik, D130075K09Rik, LEC3, Lphn3, lectomedin 3

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Adgrl3-202ENSMUST00000072521.1162031543aaENSMUSP00000072336.5
 
Protein coding
CCDS39122Q80TS3-3 GENCODE basicTSL:5
Adgrl3-208ENSMUST00000118442.851011308aaENSMUSP00000113836.2
 
Protein coding
CCDS84891D3Z3X6 GENCODE basicTSL:5
Adgrl3-209ENSMUST00000119385.849051299aaENSMUSP00000113243.2
 
Protein coding
CCDS84893D3Z6H9 GENCODE basicTSL:5
Adgrl3-219ENSMUST00000122356.848531528aaENSMUSP00000113600.2
 
Protein coding
CCDS84894Q80TS3-5 GENCODE basicTSL:5
Adgrl3-218ENSMUST00000122037.846491460aaENSMUSP00000113374.2
 
Protein coding
CCDS84895D3Z634 GENCODE basicTSL:5
Adgrl3-217ENSMUST00000121707.866901534aaENSMUSP00000112823.2
 
Protein coding
-D3YTW7 GENCODE basicTSL:5
Adgrl3-211ENSMUST00000120128.863701240aaENSMUSP00000113208.2
 
Protein coding
-D3Z6J2 GENCODE basicTSL:5
Adgrl3-201ENSMUST00000036068.1562031543aaENSMUSP00000045342.9
 
Protein coding
-K3W4M8 GENCODE basicTSL:5
Adgrl3-204ENSMUST00000117407.857051342aaENSMUSP00000112388.2
 
Protein coding
-Q80TS3-2 GENCODE basicTSL:5
Adgrl3-210ENSMUST00000119788.853941550aaENSMUSP00000114067.2
 
Protein coding
-D3YVT9 GENCODE basicTSL:5
Adgrl3-214ENSMUST00000120445.852301351aaENSMUSP00000113249.2
 
Protein coding
-D3Z6H7 GENCODE basicTSL:5
Adgrl3-215ENSMUST00000120673.851781580aaENSMUSP00000113482.2
 
Protein coding
-D3Z5M6 GENCODE basicAPPRIS P1TSL:5
Adgrl3-216ENSMUST00000121641.851511571aaENSMUSP00000113694.2
 
Protein coding
-D3Z4S7 GENCODE basicTSL:5
Adgrl3-213ENSMUST00000120292.850261283aaENSMUSP00000112548.2
 
Protein coding
-D3YWB1 GENCODE basicTSL:5
Adgrl3-212ENSMUST00000120144.849991274aaENSMUSP00000113619.2
 
Protein coding
-D3Z4V0 GENCODE basicTSL:5
Adgrl3-205ENSMUST00000117985.849741512aaENSMUSP00000113950.2
 
Protein coding
-D3Z3G4 GENCODE basicTSL:5
Adgrl3-206ENSMUST00000118034.849471503aaENSMUSP00000113534.2
 
Protein coding
-D3Z593 GENCODE basicTSL:5
Adgrl3-207ENSMUST00000118078.848711231aaENSMUSP00000112731.2
 
Protein coding
-D3YU23 GENCODE basicTSL:5
Adgrl3-203ENSMUST00000117253.847641268aaENSMUSP00000112470.2
 
Protein coding
-D3YWR3 GENCODE basicTSL:1
Adgrl3-220ENSMUST00000124117.24191873aaENSMUSP00000118882.2
 
Protein coding
-F6WMY5 TSL:5CDS 5' incomplete
Adgrl3-223ENSMUST00000132375.8679367aaENSMUSP00000117211.2
 
Nonsense mediated decay
-D6RFB0 TSL:1
Adgrl3-232ENSMUST00000153264.83279No protein-
 
Processed transcript
--TSL:5
Adgrl3-225ENSMUST00000134597.2867No protein-
 
Processed transcript
--TSL:3
Adgrl3-221ENSMUST00000126227.2675No protein-
 
Processed transcript
--TSL:5
Adgrl3-224ENSMUST00000132634.8445No protein-
 
Processed transcript
--TSL:5
Adgrl3-229ENSMUST00000148830.2241No protein-
 
Processed transcript
--TSL:5
Adgrl3-227ENSMUST00000140356.83287No protein-
 
Retained intron
--TSL:1
Adgrl3-226ENSMUST00000136104.83140No protein-
 
Retained intron
--TSL:1
Adgrl3-231ENSMUST00000149280.83138No protein-
 
Retained intron
--TSL:1
Adgrl3-228ENSMUST00000147226.82728No protein-
 
Retained intron
--TSL:1
Adgrl3-234ENSMUST00000201055.22082No protein-
 
Retained intron
--TSL:NA
Adgrl3-235ENSMUST00000201803.22035No protein-
 
Retained intron
--TSL:NA
Adgrl3-222ENSMUST00000127046.21680No protein-
 
Retained intron
--TSL:1
Adgrl3-233ENSMUST00000200930.21356No protein-
 
Retained intron
--TSL:NA
Adgrl3-230ENSMUST00000148923.2614No protein-
 
Retained intron
--TSL:3
Description

epsin 2 [Source:HGNC Symbol;Acc:HGNC:18639]

Gene Synonyms

EHB21, KIAA1065

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
EPN2-204ENST00000395620.63860584aaENSP00000378982.2
 
Protein coding
CCDS11204O95208-2 -Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
EPN2-201ENST00000314728.94871641aaENSP00000320543.5
 
Protein coding
CCDS11203O95208-1 -GENCODE basicAPPRIS ALT2TSL:1
EPN2-202ENST00000347697.64664584aaENSP00000261495.3
 
Protein coding
CCDS11204O95208-2 -GENCODE basicAPPRIS P4TSL:5
EPN2-203ENST00000395618.72216356aaENSP00000378980.3
 
Protein coding
CCDS42277O95208-5 -GENCODE basicTSL:2
EPN2-205ENST00000395626.52863484aaENSP00000378988.1
 
Protein coding
-E9PBC1 -GENCODE basicAPPRIS ALT2TSL:2
EPN2-210ENST00000571254.11883577aaENSP00000459542.1
 
Protein coding
-I3L2B2 -GENCODE basicAPPRIS ALT2TSL:1
EPN2-206ENST00000395628.61657409aaENSP00000378990.2
 
Protein coding
-F6PQP6 -TSL:2CDS 3' incomplete
EPN2-212ENST00000575595.51491349aaENSP00000459678.1
 
Protein coding
-I3L2H1 -GENCODE basicTSL:2
EPN2-208ENST00000494192.6959251aaENSP00000460193.1
 
Protein coding
-I3L356 -TSL:1CDS 3' incomplete
EPN2-217ENST00000581024.563938aaENSP00000462958.1
 
Protein coding
-J3KTF6 -TSL:2CDS 3' incomplete
EPN2-222ENST00000583197.563722aaENSP00000463141.1
 
Protein coding
-J3QKL8 -TSL:3CDS 3' incomplete
EPN2-215ENST00000577692.559195aaENSP00000463627.1
 
Protein coding
-J3QLN2 -TSL:4CDS 3' incomplete
EPN2-223ENST00000584150.557820aaENSP00000462606.1
 
Protein coding
-J3KSR0 -TSL:4CDS 3' incomplete
EPN2-213ENST00000577195.556362aaENSP00000462392.1
 
Protein coding
-J3KSA6 -TSL:4CDS 3' incomplete
EPN2-218ENST00000582015.556232aaENSP00000462465.1
 
Protein coding
-J3KSF8 -TSL:4CDS 3' incomplete
EPN2-224ENST00000584633.154675aaENSP00000462426.1
 
Protein coding
-J3KSC7 -TSL:4CDS 3' incomplete
EPN2-216ENST00000580579.556936aaENSP00000463769.1
 
Nonsense mediated decay
-J3QQJ8 -TSL:4
EPN2-207ENST00000441293.2708No protein-
 
Processed transcript
---TSL:3
EPN2-211ENST00000572627.6598No protein-
 
Processed transcript
---TSL:5
EPN2-225ENST00000584707.5593No protein-
 
Processed transcript
---TSL:4
EPN2-214ENST00000577244.5561No protein-
 
Processed transcript
---TSL:4
EPN2-219ENST00000582234.5537No protein-
 
Processed transcript
---TSL:4
EPN2-227ENST00000585097.1494No protein-
 
Processed transcript
---TSL:4
EPN2-220ENST00000582659.5404No protein-
 
Processed transcript
---TSL:5
EPN2-221ENST00000582969.5309No protein-
 
Processed transcript
---TSL:2
EPN2-209ENST00000495155.51724No protein-
 
Retained intron
---TSL:5
EPN2-226ENST00000584954.1535No protein-
 
Retained intron
---TSL:NA
Description

glucose-6-phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:4458]

Gene Synonyms

AMF, NLK

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
GPI-201ENST00000356487.114125558aaENSP00000348877.3
 
Protein coding
CCDS12437P06744-1 NM_000175.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
GPI-202ENST00000415930.84341597aaENSP00000405573.3
 
Protein coding
CCDS86742A0A2U3TZU2 -GENCODE basicAPPRIS ALT2TSL:2
GPI-208ENST00000588991.72036569aaENSP00000465858.3
 
Protein coding
CCDS54246P06744-2 -GENCODE basicTSL:2
GPI-205ENST00000586425.21574447aaENSP00000467670.3
 
Protein coding
-K7EQ48 -TSL:5CDS 5' incomplete
GPI-206ENST00000587384.6829139aaENSP00000468298.2
 
Protein coding
-K7ERK8 -TSL:3CDS 3' incomplete
GPI-217ENST00000592277.5615146aaENSP00000466191.1
 
Protein coding
-K7ELR7 -TSL:4CDS 3' incomplete
GPI-218ENST00000642240.1603145aaENSP00000496041.1
 
Protein coding
-A0A2R8YF08 -CDS 3' incomplete
GPI-209ENST00000589399.6582170aaENSP00000468201.2
 
Protein coding
-K7ERC6 -TSL:5CDS 3' incomplete
GPI-207ENST00000587521.7577116aaENSP00000464797.2
 
Protein coding
-K7EIL4 -TSL:5CDS 3' incomplete
GPI-211ENST00000589640.5571166aaENSP00000467590.2
 
Protein coding
-K7EPY4 -TSL:4CDS 3' incomplete
GPI-215ENST00000591204.5559162aaENSP00000466851.2
 
Protein coding
-K7ENA0 -TSL:4CDS 3' incomplete
GPI-214ENST00000590375.5529159aaENSP00000467221.1
 
Protein coding
-K7EP41 -TSL:4CDS 3' incomplete
GPI-221ENST00000647446.12020316aaENSP00000495129.1
 
Nonsense mediated decay
-A0A2R8Y6C7 --
GPI-216ENST00000592144.567810aaENSP00000464798.2
 
Nonsense mediated decay
-A0A0G2JLI6 -TSL:3CDS 5' incomplete
GPI-219ENST00000643067.13014No protein-
 
Processed transcript
----
GPI-203ENST00000586077.13053No protein-
 
Retained intron
---TSL:NA
GPI-204ENST00000586392.11706No protein-
 
Retained intron
---TSL:2
GPI-212ENST00000589985.51516No protein-
 
Retained intron
---TSL:3
GPI-210ENST00000589504.1536No protein-
 
Retained intron
---TSL:2
GPI-220ENST00000646312.1479No protein-
 
Retained intron
----
GPI-213ENST00000590362.1378No protein-
 
Retained intron
---TSL:5
Description

valosin containing protein [Source:HGNC Symbol;Acc:HGNC:12666]

Gene Synonyms

CDC48, IBMPFD, TERA, p97

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VCP-201ENST00000358901.113746806aaENSP00000351777.6
 
Protein coding
CCDS6573P55072 V9HW80 NM_007126.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VCP-221ENST00000679902.16033772aaENSP00000506338.1
 
Protein coding
---GENCODE basic
VCP-209ENST00000677257.14404804aaENSP00000504354.1
 
Protein coding
---GENCODE basicAPPRIS ALT1
VCP-212ENST00000678650.14362761aaENSP00000503426.1
 
Protein coding
---GENCODE basic
VCP-203ENST00000448530.63849761aaENSP00000392088.2
 
Protein coding
-C9IZA5 -GENCODE basicTSL:5
VCP-202ENST00000417448.23382761aaENSP00000399456.2
 
Protein coding
-C9JUP7 -GENCODE basicTSL:3
VCP-219ENST00000679862.13159760aaENSP00000504990.1
 
Protein coding
---GENCODE basic
VCP-231ENST00000681335.13077754aaENSP00000505230.1
 
Protein coding
---GENCODE basic
VCP-217ENST00000679647.12895733aaENSP00000506216.1
 
Protein coding
---GENCODE basic
VCP-233ENST00000681537.1130376aaENSP00000505847.1
 
Protein coding
---CDS 5' incomplete
VCP-227ENST00000680834.1709237aaENSP00000506387.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-232ENST00000681386.146255aaENSP00000505509.1
 
Protein coding
---CDS 3' incomplete
VCP-234ENST00000681562.1328110aaENSP00000505893.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-215ENST00000679449.1321107aaENSP00000506658.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-228ENST00000680900.1306102aaENSP00000505674.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-210ENST00000678018.1448043aaENSP00000503811.1
 
Nonsense mediated decay
----
VCP-211ENST00000678465.14451334aaENSP00000504259.1
 
Nonsense mediated decay
----
VCP-229ENST00000680916.13264694aaENSP00000505769.1
 
Nonsense mediated decay
----
VCP-213ENST00000679204.22987458aaENSP00000503131.2
 
Nonsense mediated decay
----
VCP-222ENST00000680079.180956aaENSP00000506523.1
 
Nonsense mediated decay
----
VCP-224ENST00000680520.146377aaENSP00000505308.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-230ENST00000681125.144147aaENSP00000505052.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-226ENST00000680731.143677aaENSP00000505497.1
 
Nonsense mediated decay
----
VCP-236ENST00000681789.136450aaENSP00000505142.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-225ENST00000680575.1510No protein-
 
Processed transcript
----
VCP-220ENST00000679901.1458No protein-
 
Processed transcript
----
VCP-223ENST00000680108.1415No protein-
 
Processed transcript
----
VCP-214ENST00000679392.1271No protein-
 
Processed transcript
----
VCP-216ENST00000679599.15506No protein-
 
Retained intron
----
VCP-235ENST00000681690.14691No protein-
 
Retained intron
----
VCP-218ENST00000679800.14561No protein-
 
Retained intron
----
VCP-208ENST00000676836.23597No protein-
 
Retained intron
----
VCP-207ENST00000493886.52942No protein-
 
Retained intron
---TSL:2
VCP-206ENST00000480327.22162No protein-
 
Retained intron
---TSL:5
VCP-205ENST00000479300.21159No protein-
 
Retained intron
---TSL:1
VCP-204ENST00000466100.1508No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 2, Coding exons: 0, Transcript length: 508 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000466100.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x30f091c8)