Human (GRCh38.p14)
Description

PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:HGNC:17468]

Gene Synonyms

ENH, LIM

Location
About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 2309 variant alleles and maps to 136 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000317968.9PDLIM5-2016043596aaENSP00000321746.4
 
Protein coding
CCDS3641Q96HC4-1 NM_006457.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000615540.4PDLIM5-2226219625aaENSP00000480359.1
 
Protein coding
CCDS58916Q96HC4-6 -GENCODE basicTSL:1
ENST00000437932.5PDLIM5-2065713271aaENSP00000398469.2
 
Protein coding
CCDS75166A0A0A0MSP3 -GENCODE basicTSL:5
ENST00000514743.5PDLIM5-2193356625aaENSP00000424360.1
 
Protein coding
CCDS58916Q96HC4-6 -GENCODE basicTSL:2
ENST00000542407.5PDLIM5-2212979487aaENSP00000442187.2
 
Protein coding
CCDS47102Q96HC4-4 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000503974.5PDLIM5-2072081483aaENSP00000424297.1
 
Protein coding
CCDS58917Q96HC4-7 -GENCODE basicTSL:2
ENST00000380180.7PDLIM5-2052020234aaENSP00000369527.3
 
Protein coding
CCDS47103Q96HC4-2 -GENCODE basicTSL:1
ENST00000318007.9PDLIM5-2021960214aaENSP00000322021.5
 
Protein coding
CCDS47104Q96HC4-3 -GENCODE basicTSL:1
ENST00000508216.5PDLIM5-2101794234aaENSP00000426804.1
 
Protein coding
CCDS47103Q96HC4-2 -GENCODE basicTSL:2
ENST00000359265.8PDLIM5-2031189136aaENSP00000352210.4
 
Protein coding
CCDS58915Q96HC4-5 -GENCODE basicTSL:1
ENST00000513341.5PDLIM5-218794196aaENSP00000429577.1
 
Protein coding
H0YBI4 -TSL:3CDS 5' incomplete
ENST00000510099.5PDLIM5-214554176aaENSP00000486834.1
 
Protein coding
A0A0D9SFR4 -TSL:4CDS 3' incomplete
ENST00000504489.3PDLIM5-20853838aaENSP00000423009.1
 
Protein coding
D6RAA1 -GENCODE basicTSL:4
ENST00000512274.1PDLIM5-21737247aaENSP00000426379.1
 
Protein coding
D6RGG6 -GENCODE basicTSL:2
ENST00000627587.2PDLIM5-223185339aaENSP00000486938.1
 
Nonsense mediated decay
A0A0D9SFW3 -TSL:2
ENST00000506632.2PDLIM5-209907231aaENSP00000422528.1
 
Nonsense mediated decay
H0Y8Y3 -TSL:3CDS 5' incomplete
ENST00000509357.5PDLIM5-21355485aaENSP00000422833.1
 
Nonsense mediated decay
H0Y929 -TSL:5CDS 5' incomplete
ENST00000380176.7PDLIM5-2043098No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000514830.5PDLIM5-220802No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000511586.5PDLIM5-215547No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000508531.1PDLIM5-211480No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000511767.3PDLIM5-216463No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000509333.5PDLIM5-212743No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,189 bps, Translation length: 136 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96HC4

CCDS

This transcript is a member of the Human CCDS set: CCDS58915

Transcript Support Level (TSL)

TSL:1

Version

ENST00000359265.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.