Human (GRCh38.p14)
Description

sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]

Gene Synonyms

A170, OSIL, P60, P62, P62B, PDB3

About this transcript

This transcript has 8 exons, is annotated with 101 domains and features, is associated with 11153 variant alleles and maps to 582 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000389805.9SQSTM1-2022840440aaENSP00000374455.4
 
Protein coding
CCDS34317Q13501-1 NM_003900.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000360718.5SQSTM1-2012253356aaENSP00000353944.5
 
Protein coding
CCDS47355Q13501-2 -GENCODE basicTSL:1
ENST00000510187.5SQSTM1-2131714378aaENSP00000424477.1
 
Protein coding
E7EMC7 -GENCODE basicTSL:5
ENST00000514093.5SQSTM1-215842167aaENSP00000427308.1
 
Protein coding
E9PFW8 -TSL:5CDS 3' incomplete
ENST00000422245.5SQSTM1-203628140aaENSP00000394534.1
 
Protein coding
C9JRJ8 -TSL:4CDS 3' incomplete
ENST00000504627.1SQSTM1-209602190aaENSP00000425957.1
 
Protein coding
E3W990 -TSL:5CDS 3' incomplete
ENST00000626660.1SQSTM1-21627473aaENSP00000487071.1
 
Protein coding
C9J6J8 -GENCODE basicTSL:5
ENST00000508284.5SQSTM1-21257869aaENSP00000424195.1
 
Nonsense mediated decay
D6RBF1 -TSL:4
ENST00000453046.5SQSTM1-20457273aaENSP00000405061.1
 
Nonsense mediated decay
C9J6J8 -TSL:4
ENST00000506690.1SQSTM1-2112405No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000512234.1SQSTM1-2141722No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000506042.5SQSTM1-210921No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000481335.5SQSTM1-207562No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000464493.5SQSTM1-205532No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000466342.1SQSTM1-206808No protein-
 
Retained intron
--TSL:2
ENST00000485412.1SQSTM1-208656No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,840 bps, Translation length: 440 residues

MANE

This MANE Select transcript contains ENSP00000374455 and matches to NM_003900.5 and NP_003891.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13501

CCDS

This transcript is a member of the Human CCDS set: CCDS34317

Transcript Support Level (TSL)

TSL:1

Version

ENST00000389805.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.