Human (GRCh38.p14)
Description

SNF8 subunit of ESCRT-II [Source:HGNC Symbol;Acc:HGNC:17028]

Gene Synonyms

DOT3, EAP30, VPS22

Location
About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 7638 variant alleles and maps to 361 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000502492.6SNF8-2022044258aaENSP00000421380.1
 
Protein coding
CCDS11541Q96H20-1 NM_007241.4MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000290330.7SNF8-201951257aaENSP00000290330.3
 
Protein coding
CCDS82156Q96H20-2 -GENCODE basicAPPRIS P1TSL:1
ENST00000510558.6SNF8-2091051167aaENSP00000421390.2
 
Nonsense mediated decay
D6RFY6 -TSL:5
ENST00000514929.1SNF8-213775141aaENSP00000427328.1
 
Nonsense mediated decay
D6RJ86 -TSL:5
ENST00000507302.6SNF8-205742103aaENSP00000422701.1
 
Nonsense mediated decay
D6RBI1 -TSL:3
ENST00000576353.5SNF8-21770053aaENSP00000460001.1
 
Nonsense mediated decay
I3L2X5 -TSL:5
ENST00000509989.5SNF8-20667716aaENSP00000467548.1
 
Nonsense mediated decay
K7EPV2 -TSL:3CDS 5' incomplete
ENST00000573795.5SNF8-21658336aaENSP00000460981.1
 
Nonsense mediated decay
I3L457 -TSL:5
ENST00000509995.5SNF8-20756081aaENSP00000421956.1
 
Nonsense mediated decay
H0Y8S5 -TSL:3CDS 5' incomplete
ENST00000514089.5SNF8-212571No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000504000.1SNF8-2031899No protein-
 
Retained intron
--TSL:2
ENST00000512243.5SNF8-211863No protein-
 
Retained intron
--TSL:2
ENST00000515174.5SNF8-214823No protein-
 
Retained intron
--TSL:2
ENST00000515572.5SNF8-215687No protein-
 
Retained intron
--TSL:2
ENST00000506104.1SNF8-204455No protein-
 
Retained intron
--TSL:3
ENST00000510195.1SNF8-208445No protein-
 
Retained intron
--TSL:2
ENST00000511214.1SNF8-210429No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,044 bps, Translation length: 258 residues

MANE

This MANE Select transcript contains ENSP00000421380 and matches to NM_007241.4 and NP_009172.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96H20

CCDS

This transcript is a member of the Human CCDS set: CCDS11541

Transcript Support Level (TSL)

TSL:1

Version

ENST00000502492.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.