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EnsemblEnsembl Home
Description

ataxin 3 [Source:HGNC Symbol;Acc:HGNC:7106]

Gene Synonyms

ATX3, JOS, MJD, SCA3

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000644486.2ATXN3-2516884361aaENSP00000496695.1
 
Protein coding
CCDS9900P54252-2 NM_004993.6MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1
ENST00000429774.6ATXN3-2046713291aaENSP00000389376.3
 
Protein coding
CCDS73680C9JQV6 -GENCODE basicTSL:1
ENST00000503767.5ATXN3-2071315346aaENSP00000426697.1
 
Protein coding
CCDS45154P54252-4 -GENCODE basicTSL:1
ENST00000502250.5ATXN3-2061259182aaENSP00000425322.1
 
Protein coding
CCDS53908P54252-5 -GENCODE basicTSL:1
ENST00000340660.10ATXN3-2011205306aaENSP00000339110.6
 
Protein coding
CCDS32143P54252-3 -GENCODE basicTSL:1
ENST00000545170.5ATXN3-2156950370aaENSP00000445618.2
 
Protein coding
-F5H211 -GENCODE basicTSL:5
ENST00000393287.9ATXN3-2036770310aaENSP00000376965.6
 
Protein coding
-A0A0A0MS38 -GENCODE basicTSL:1
ENST00000532032.5ATXN3-2141191364aaENSP00000437157.1
 
Protein coding
-P54252-1 -GENCODE basicTSL:1
ENST00000554592.5ATXN3-2271010329aaENSP00000451385.1
 
Protein coding
-G3V3R7 -TSL:1CDS 3' incomplete
ENST00000553491.5ATXN3-219857278aaENSP00000451996.1
 
Protein coding
-G3V4U9 -TSL:1CDS 3' incomplete
ENST00000555381.5ATXN3-231803260aaENSP00000451001.1
 
Protein coding
-G3V328 -TSL:1CDS 3' incomplete
ENST00000556220.5ATXN3-235692223aaENSP00000450641.1
 
Protein coding
-G3V2G1 -TSL:1CDS 3' incomplete
ENST00000554672.6ATXN3-228683126aaENSP00000451417.2
 
Protein coding
-G3V3T6 -TSL:1CDS 3' incomplete
ENST00000506466.5ATXN3-209637205aaENSP00000435571.1
 
Protein coding
-E9PJN5 -TSL:3CDS 3' incomplete
ENST00000526872.3ATXN3-213604202aaENSP00000474067.2
 
Protein coding
-S4R399 -TSL:5CDS 5' and 3' incomplete
ENST00000557311.6ATXN3-246559150aaENSP00000450642.2
 
Protein coding
-G3V2G2 -TSL:1CDS 3' incomplete
ENST00000359366.10ATXN3-202257279aaENSP00000352324.5
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ENST00000647161.1ATXN3-2541569351aaENSP00000493680.1
 
Nonsense mediated decay
-A0A2R8Y3X7 --
ENST00000556374.5ATXN3-2401083114aaENSP00000451399.1
 
Nonsense mediated decay
-G3V3S5 -TSL:1
ENST00000553488.5ATXN3-218106579aaENSP00000452461.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ENST00000556898.5ATXN3-243990159aaENSP00000451769.1
 
Nonsense mediated decay
-G3V4F4 -TSL:1
ENST00000554673.5ATXN3-229981161aaENSP00000452356.1
 
Nonsense mediated decay
-G3V5H3 -TSL:5
ENST00000554350.5ATXN3-225943110aaENSP00000451103.1
 
Nonsense mediated decay
-G3V390 -TSL:1
ENST00000554994.5ATXN3-230922150aaENSP00000451771.1
 
Nonsense mediated decay
-G3V4F5 -TSL:1
ENST00000556671.5ATXN3-242921110aaENSP00000451693.1
 
Nonsense mediated decay
-G3V4B1 -TSL:1
ENST00000556274.5ATXN3-23691379aaENSP00000451733.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ENST00000556288.5ATXN3-23790179aaENSP00000450566.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ENST00000556315.6ATXN3-23884878aaENSP00000451132.1
 
Nonsense mediated decay
-G3V3A6 -TSL:1
ENST00000557030.6ATXN3-245806200aaENSP00000452139.1
 
Nonsense mediated decay
-G3V526 -TSL:1
ENST00000556958.5ATXN3-24476999aaENSP00000452532.1
 
Nonsense mediated decay
-D6R9I5 -TSL:1
ENST00000555816.5ATXN3-23276079aaENSP00000451910.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ENST00000553570.5ATXN3-22175795aaENSP00000451405.1
 
Nonsense mediated decay
-G3V3T0 -TSL:1
ENST00000646485.1ATXN3-25368287aaENSP00000496590.1
 
Nonsense mediated decay
-A0A2R8Y888 --
ENST00000515746.6ATXN3-21261899aaENSP00000422073.1
 
Nonsense mediated decay
-D6R9I5 -TSL:5
ENST00000556082.6ATXN3-23458779aaENSP00000450492.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ENST00000642417.1ATXN3-2491098No protein-
 
Processed transcript
----
ENST00000554491.5ATXN3-2261064No protein-
 
Processed transcript
---TSL:1
ENST00000553309.5ATXN3-2171022No protein-
 
Processed transcript
---TSL:1
ENST00000553498.5ATXN3-220911No protein-
 
Processed transcript
---TSL:1
ENST00000553686.5ATXN3-222869No protein-
 
Processed transcript
---TSL:1
ENST00000555958.5ATXN3-233857No protein-
 
Processed transcript
---TSL:1
ENST00000554214.5ATXN3-224771No protein-
 
Processed transcript
---TSL:1
ENST00000553287.5ATXN3-216726No protein-
 
Processed transcript
---TSL:1
ENST00000554040.5ATXN3-223592No protein-
 
Processed transcript
---TSL:1
ENST00000511362.5ATXN3-211591No protein-
 
Processed transcript
---TSL:3
ENST00000556339.5ATXN3-239525No protein-
 
Processed transcript
---TSL:1
ENST00000564606.6ATXN3-247460No protein-
 
Processed transcript
---TSL:1
ENST00000504047.1ATXN3-208426No protein-
 
Processed transcript
---TSL:3
ENST00000642896.1ATXN3-250423No protein-
 
Processed transcript
----
ENST00000644720.1ATXN3-252388No protein-
 
Processed transcript
----
ENST00000556644.5ATXN3-241372No protein-
 
Processed transcript
---TSL:1
ENST00000507965.5ATXN3-210708No protein-
 
Retained intron
---TSL:2
ENST00000568290.1ATXN3-248671No protein-
 
Retained intron
---TSL:1
ENST00000454964.3ATXN3-205598No protein-
 
Retained intron
---TSL:2
Description

coiled-coil domain containing 30 [Source:HGNC Symbol;Acc:HGNC:26103]

Gene Synonyms

FLJ20972, LOC728621, PFD6L

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000668663.1CCDC30-2502966710aaENSP00000499699.1
 
Protein coding
-A0A590UJA8 -Ensembl CanonicalGENCODE basicAPPRIS ALT2
ENST00000342022.8CCDC30-2023098783aaENSP00000339280.4
 
Protein coding
CCDS30690Q5VVM6-1 -GENCODE basicAPPRIS P2TSL:5
ENST00000428554.6CCDC30-2033063783aaENSP00000397035.2
 
Protein coding
CCDS30690Q5VVM6-1 -GENCODE basicAPPRIS P2TSL:5
ENST00000514642.1CCDC30-2146827249aaENSP00000499505.1
 
Protein coding
-A0A590UJL6 -TSL:1CDS 5' incomplete
ENST00000657597.1CCDC30-2266518939aaENSP00000499662.1
 
Protein coding
-A0A590UK19 -GENCODE basicAPPRIS ALT2
ENST00000660083.1CCDC30-2283245710aaENSP00000499483.1
 
Protein coding
-A0A590UJA8 -GENCODE basicAPPRIS ALT2
ENST00000665176.1CCDC30-2402986666aaENSP00000499388.1
 
Protein coding
-A0A590UJC1 -GENCODE basicAPPRIS ALT2
ENST00000664805.1CCDC30-2382929710aaENSP00000499336.1
 
Protein coding
-A0A590UJA8 -GENCODE basicAPPRIS ALT2
ENST00000667205.1CCDC30-2472793710aaENSP00000499722.1
 
Protein coding
-A0A590UJA8 -GENCODE basicAPPRIS ALT2
ENST00000670292.1CCDC30-253274380aaENSP00000499541.1
 
Protein coding
-A0A590UJL9 -GENCODE basic
ENST00000340612.6CCDC30-2012689826aaENSP00000340378.5
 
Protein coding
-A0A2U3TZI4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000671281.1CCDC30-2562627391aaENSP00000499366.1
 
Protein coding
-A0A590UKA6 -GENCODE basic
ENST00000671538.1CCDC30-2572553797aaENSP00000499316.1
 
Protein coding
-A0A590UJ92 -CDS 5' incomplete
ENST00000655164.1CCDC30-2192412391aaENSP00000499756.1
 
Protein coding
-A0A590UKA6 -GENCODE basic
ENST00000654683.1CCDC30-218228080aaENSP00000499720.1
 
Protein coding
-A0A590UJL9 -GENCODE basic
ENST00000655447.1CCDC30-221210780aaENSP00000499240.1
 
Protein coding
-A0A590UJL9 -GENCODE basic
ENST00000667947.1CCDC30-248196316aaENSP00000499262.1
 
Protein coding
-A0A590UJ34 -GENCODE basic
ENST00000654604.1CCDC30-2171929503aaENSP00000499713.1
 
Protein coding
-A0A590UK35 -CDS 3' incomplete
ENST00000655845.1CCDC30-222169980aaENSP00000499484.1
 
Protein coding
-A0A590UJL9 -GENCODE basic
ENST00000661864.1CCDC30-2321510273aaENSP00000499424.1
 
Protein coding
-A0A590UJI4 -GENCODE basic
ENST00000670982.1CCDC30-2551261244aaENSP00000499317.1
 
Protein coding
-A0A590UJ77 -CDS 3' incomplete
ENST00000653735.1CCDC30-216785262aaENSP00000499649.1
 
Protein coding
-A0A590UK05 -CDS 5' and 3' incomplete
ENST00000668036.1CCDC30-249582131aaENSP00000499359.1
 
Protein coding
-A0A590UJC6 -CDS 3' incomplete
ENST00000666893.1CCDC30-2454720197aaENSP00000499513.1
 
Nonsense mediated decay
-A0A590UJQ0 -CDS 5' incomplete
ENST00000477155.6CCDC30-209365343aaENSP00000421479.3
 
Nonsense mediated decay
-D6RFH8 -TSL:1
ENST00000660938.1CCDC30-2313544460aaENSP00000499261.1
 
Nonsense mediated decay
-A0A590UJ28 --
ENST00000664192.1CCDC30-2363277165aaENSP00000499799.1
 
Nonsense mediated decay
-A0A590UJ69 --
ENST00000665812.1CCDC30-2443133152aaENSP00000499766.1
 
Nonsense mediated decay
-A0A590UKA3 --
ENST00000670783.1CCDC30-2542931165aaENSP00000499286.1
 
Nonsense mediated decay
-A0A590UJ69 --
ENST00000658812.1CCDC30-2272913165aaENSP00000499738.1
 
Nonsense mediated decay
-A0A590UJ69 --
ENST00000663866.1CCDC30-2352540286aaENSP00000499305.1
 
Nonsense mediated decay
-A0A590UJ83 --
ENST00000664418.1CCDC30-237197343aaENSP00000499489.1
 
Nonsense mediated decay
-D6RFH8 --
ENST00000669138.1CCDC30-2511798188aaENSP00000499594.1
 
Nonsense mediated decay
-A0A590UJW7 --
ENST00000509712.6CCDC30-213156690aaENSP00000424370.2
 
Nonsense mediated decay
-F6UBW0 -TSL:2CDS 5' incomplete
ENST00000656470.1CCDC30-224695138aaENSP00000499464.1
 
Nonsense mediated decay
-A0A590UJK6 -CDS 5' incomplete
ENST00000471390.6CCDC30-2062037No protein-
 
Processed transcript
---TSL:5
ENST00000475614.7CCDC30-2081690No protein-
 
Processed transcript
---TSL:2
ENST00000660830.1CCDC30-229795No protein-
 
Processed transcript
----
ENST00000655265.1CCDC30-220794No protein-
 
Processed transcript
----
ENST00000492422.1CCDC30-210735No protein-
 
Processed transcript
---TSL:2
ENST00000665217.1CCDC30-241728No protein-
 
Processed transcript
----
ENST00000653544.1CCDC30-215692No protein-
 
Processed transcript
----
ENST00000468651.2CCDC30-205685No protein-
 
Processed transcript
---TSL:2
ENST00000657248.1CCDC30-225633No protein-
 
Processed transcript
----
ENST00000665466.1CCDC30-242616No protein-
 
Processed transcript
----
ENST00000660910.1CCDC30-230417No protein-
 
Processed transcript
----
ENST00000471699.2CCDC30-207409No protein-
 
Processed transcript
---TSL:3
ENST00000462063.1CCDC30-204362No protein-
 
Processed transcript
---TSL:3
ENST00000669471.1CCDC30-2523617No protein-
 
Retained intron
----
ENST00000663155.1CCDC30-2343600No protein-
 
Retained intron
----
ENST00000507855.5CCDC30-2122445No protein-
 
Retained intron
---TSL:1
ENST00000665792.1CCDC30-2432123No protein-
 
Retained intron
----
ENST00000495044.6CCDC30-2112046No protein-
 
Retained intron
---TSL:2
ENST00000667055.1CCDC30-2461785No protein-
 
Retained intron
----
ENST00000656306.1CCDC30-2231602No protein-
 
Retained intron
----
ENST00000665137.1CCDC30-2391569No protein-
 
Retained intron
----
ENST00000663139.1CCDC30-2331520No protein-
 
Retained intron
----
Description

SIN3 transcription regulator family member B [Source:HGNC Symbol;Acc:HGNC:19354]

Gene Synonyms

KIAA0700

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000248054.10SIN3B-20150381130aaENSP00000248054.4
 
Protein coding
CCDS74308O75182-2 NM_001297595.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000379803.5SIN3B-20251291162aaENSP00000369131.1
 
Protein coding
CCDS32946O75182-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000595541.1SIN3B-2062767720aaENSP00000469740.1
 
Protein coding
CCDS77254M0QYC5 -GENCODE basicTSL:2
ENST00000596802.5SIN3B-2092556353aaENSP00000473039.1
 
Protein coding
-O75182-3 -GENCODE basicTSL:1
ENST00000596638.1SIN3B-2081104309aaENSP00000472365.1
 
Protein coding
-M0R271 -TSL:5CDS 5' incomplete
ENST00000594235.1SIN3B-203923No protein-
 
Processed transcript
---TSL:1
ENST00000599880.1SIN3B-210564No protein-
 
Processed transcript
---TSL:3
ENST00000595900.1SIN3B-207563No protein-
 
Processed transcript
---TSL:4
ENST00000601141.5SIN3B-2111473No protein-
 
Retained intron
---TSL:2
ENST00000595049.5SIN3B-205904No protein-
 
Retained intron
---TSL:2
ENST00000594372.1SIN3B-204875No protein-
 
Retained intron
---TSL:3
ENST00000602204.1SIN3B-212517No protein-
 
Retained intron
---TSL:2
Description

LDL receptor related protein 8 [Source:HGNC Symbol;Acc:HGNC:6700]

Gene Synonyms

APOER2, HSZ75190, LRP-8, MCI1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000306052.12LRP8-2017704963aaENSP00000303634.6
 
Protein coding
CCDS578Q14114-1 NM_004631.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000371454.6LRP8-2043322904aaENSP00000360509.2
 
Protein coding
CCDS30720Q14114-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000354412.7LRP8-2032553700aaENSP00000346391.3
 
Protein coding
CCDS579Q14114-2 -GENCODE basicTSL:1
ENST00000347547.7LRP8-2022392793aaENSP00000334522.2
 
Protein coding
CCDS580Q14114-4 -GENCODE basicTSL:1
ENST00000662198.1LRP8-2294534834aaENSP00000499355.1
 
Protein coding
-A0A590UJ98 -GENCODE basic
ENST00000668448.1LRP8-2344324888aaENSP00000499273.1
 
Protein coding
-A0A590UJ57 -GENCODE basicAPPRIS ALT2
ENST00000657895.1LRP8-2233963790aaENSP00000499764.1
 
Protein coding
-A0A590UK97 -GENCODE basic
ENST00000653217.1LRP8-2153854808aaENSP00000499777.1
 
Protein coding
-A0A590UKB1 -CDS 5' incomplete
ENST00000668071.1LRP8-2333770766aaENSP00000499744.1
 
Protein coding
-A0A590UK84 -CDS 5' incomplete
ENST00000658277.1LRP8-2243716708aaENSP00000499550.1
 
Protein coding
-A0A590UJT0 -GENCODE basic
ENST00000659993.1LRP8-2263477888aaENSP00000499697.1
 
Protein coding
-A0A590UK45 -GENCODE basicAPPRIS ALT2
ENST00000667377.1LRP8-2323258926aaENSP00000499405.1
 
Protein coding
-A0A590UJF9 -GENCODE basicAPPRIS ALT2
ENST00000465675.6LRP8-2082992841aaENSP00000437009.2
 
Protein coding
-E9PP15 -TSL:2CDS 5' incomplete
ENST00000662604.1LRP8-2302782732aaENSP00000499486.1
 
Protein coding
-A0A590UJJ8 -GENCODE basic
ENST00000656486.1LRP8-2212445673aaENSP00000499708.1
 
Protein coding
-A0A590UK53 -CDS 5' incomplete
ENST00000653169.1LRP8-2141263234aaENSP00000499783.1
 
Protein coding
-A0A590UKB5 -CDS 5' incomplete
ENST00000654947.1LRP8-219702124aaENSP00000499442.1
 
Protein coding
-A0A590UJJ9 -CDS 5' incomplete
ENST00000475501.2LRP8-209471157aaENSP00000436651.2
 
Protein coding
-H0YEV6 -TSL:3CDS 5' and 3' incomplete
ENST00000480045.6LRP8-2104448594aaENSP00000433554.2
 
Nonsense mediated decay
-E9PKG2 -TSL:5
ENST00000661457.1LRP8-228391086aaENSP00000499547.1
 
Nonsense mediated decay
-A0A590UJQ4 --
ENST00000653810.1LRP8-2162112537aaENSP00000499410.1
 
Nonsense mediated decay
-A0A590UJH5 -CDS 5' incomplete
ENST00000657047.1LRP8-2221273200aaENSP00000499574.1
 
Nonsense mediated decay
-A0A590UJV3 -CDS 5' incomplete
ENST00000662802.1LRP8-231112074aaENSP00000499254.1
 
Nonsense mediated decay
-A0A590UJ30 -CDS 5' incomplete
ENST00000481431.2LRP8-2111066135aaENSP00000435346.1
 
Nonsense mediated decay
-H0YEA5 -TSL:3CDS 5' incomplete
ENST00000529670.6LRP8-213959143aaENSP00000431241.2
 
Nonsense mediated decay
-H0YCA4 -TSL:5CDS 5' incomplete
ENST00000460214.6LRP8-207847175aaENSP00000499267.1
 
Nonsense mediated decay
-A0A590UJ39 -TSL:3CDS 5' incomplete
ENST00000668991.1LRP8-2353044No protein-
 
Processed transcript
----
ENST00000655704.1LRP8-2202819No protein-
 
Processed transcript
----
ENST00000658404.1LRP8-2252670No protein-
 
Processed transcript
----
ENST00000654634.1LRP8-217899No protein-
 
Processed transcript
----
ENST00000661359.1LRP8-227688No protein-
 
Processed transcript
----
ENST00000450469.1LRP8-205237No protein-
 
Processed transcript
---TSL:3
ENST00000669432.1LRP8-23610750No protein-
 
Retained intron
----
ENST00000654834.1LRP8-2183790No protein-
 
Retained intron
----
ENST00000459674.5LRP8-2063300No protein-
 
Retained intron
---TSL:2
ENST00000496580.1LRP8-212507No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 3, Coding exons: 0, Transcript length: 688 bps,

Version

ENST00000661359.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x2882fa38)