Human (GRCh38.p14)
Description

heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]

Gene Synonyms

C1ORF199, FLJ30202, FLJ37978, HNRNPU-AS1, HNRPU, NCRNA00201, SAF-A

About this transcript

This transcript has 10 exons, is annotated with 20 domains and features, is associated with 4453 variant alleles and maps to 799 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000640218.2HNRNPU-2266867825aaENSP00000491215.1
 
Protein coding
CCDS41479Q00839-1 NM_031844.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000639628.2HNRNPU-2197674549aaENSP00000491340.1
 
Protein coding
A0A1W2PPH7 -GENCODE basicTSL:1
ENST00000444376.7HNRNPU-2056827806aaENSP00000393151.2
 
Protein coding
CCDS31081Q00839-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000640001.1HNRNPU-2234227546aaENSP00000491294.1
 
Protein coding
A0A1W2PP34 -GENCODE basicTSL:5
ENST00000440865.2HNRNPU-2043207602aaENSP00000410728.2
 
Protein coding
Q5RI18 -GENCODE basicTSL:2
ENST00000283179.14HNRNPU-2013120744aaENSP00000283179.10
 
Protein coding
A0A1X7SBS1 -GENCODE basicTSL:5
ENST00000704074.1HNRNPU-2323015665aaENSP00000515674.1
 
Protein coding
A0A994J6V2 -CDS 5' incomplete
ENST00000638475.1HNRNPU-2142698728aaENSP00000491305.1
 
Protein coding
A0A1W2PP35 -TSL:5CDS 5' incomplete
ENST00000638716.1HNRNPU-2162640547aaENSP00000491601.1
 
Protein coding
A0A1W2PPL4 -GENCODE basicTSL:5
ENST00000639824.1HNRNPU-2211450327aaENSP00000491903.1
 
Protein coding
A0A1W2PQD4 -TSL:5CDS 5' incomplete
ENST00000483966.3HNRNPU-2101069302aaENSP00000492573.1
 
Protein coding
A0A1W2PRZ7 -TSL:2CDS 5' incomplete
ENST00000475997.6HNRNPU-2085290152aaENSP00000482621.2
 
Nonsense mediated decay
A0A087WZF3 -TSL:5CDS 5' incomplete
ENST00000639880.1HNRNPU-222423970aaENSP00000490988.1
 
Nonsense mediated decay
A0A1W2PNG3 -TSL:5
ENST00000638301.1HNRNPU-2133650372aaENSP00000491807.1
 
Nonsense mediated decay
A0A1W2PQ74 -TSL:5
ENST00000640306.1HNRNPU-2282917804aaENSP00000491685.1
 
Nonsense mediated decay
A0A1W2PPS1 -TSL:5
ENST00000640056.1HNRNPU-2242045128aaENSP00000492620.1
 
Nonsense mediated decay
A0A1W2PRI6 -TSL:5CDS 5' incomplete
ENST00000638230.1HNRNPU-2121922527aaENSP00000492010.1
 
Nonsense mediated decay
A0A1W2PQL0 -TSL:5CDS 5' incomplete
ENST00000640440.1HNRNPU-229871181aaENSP00000491263.1
 
Nonsense mediated decay
A0A1W2PP22 -TSL:3CDS 5' incomplete
ENST00000640119.1HNRNPU-22546148aaENSP00000491491.1
 
Nonsense mediated decay
A0A1W2PPE9 -TSL:5CDS 5' incomplete
ENST00000489705.2HNRNPU-21145117aaENSP00000479468.2
 
Nonsense mediated decay
A0A087WVI9 -TSL:3CDS 5' incomplete
ENST00000465881.2HNRNPU-206883No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000640264.1HNRNPU-227328No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000649899.1HNRNPU-23113084No protein-
 
Retained intron
---
ENST00000366527.4HNRNPU-20312852No protein-
 
Retained intron
--TSL:2
ENST00000638952.1HNRNPU-2175678No protein-
 
Retained intron
--TSL:5
ENST00000468690.2HNRNPU-2075273No protein-
 
Retained intron
--TSL:5
ENST00000476241.2HNRNPU-2094844No protein-
 
Retained intron
--TSL:5
ENST00000640657.1HNRNPU-2304323No protein-
 
Retained intron
--TSL:5
ENST00000639667.1HNRNPU-2203940No protein-
 
Retained intron
--TSL:2
ENST00000366525.8HNRNPU-2022851No protein-
 
Retained intron
--TSL:5
ENST00000639064.1HNRNPU-2182625No protein-
 
Retained intron
--TSL:5
ENST00000638589.1HNRNPU-2152225No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,227 bps, Translation length: 546 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000640001.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

retained intron final [Definitions]

RNA-Seq supported only

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.