Human (GRCh38.p14)
Description

sodium channel and clathrin linker 1 [Source:HGNC Symbol;Acc:HGNC:26406]

Gene Synonyms

FLJ30655, HCAP-1A

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 22983 variant alleles and maps to 234 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000281142.10SCLT1-2012987688aaENSP00000281142.5
 
Protein coding
CCDS3740Q96NL6-1 NM_144643.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:2
ENST00000506368.5SCLT1-2082096131aaENSP00000424304.1
 
Protein coding
CCDS77957D6RBA6 -GENCODE basicTSL:1
ENST00000511426.5SCLT1-209169679aaENSP00000420861.1
 
Protein coding
CCDS77958Q96NL6-4 -GENCODE basicTSL:1
ENST00000503401.1SCLT1-205160456aaENSP00000425315.1
 
Protein coding
D6RDM2 -GENCODE basicTSL:3
ENST00000503215.5SCLT1-2041364284aaENSP00000424029.1
 
Protein coding
D6RBP0 -GENCODE basicTSL:1
ENST00000439369.6SCLT1-202966175aaENSP00000395292.2
 
Protein coding
Q96NL6-3 -GENCODE basicTSL:1
ENST00000651532.1SCLT1-2103311489aaENSP00000498519.1
 
Nonsense mediated decay
CCDS93634A0A494C0G8 --
ENST00000502495.1SCLT1-2031811No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000503565.5SCLT1-206734No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000506233.5SCLT1-2073673No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,696 bps, Translation length: 79 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96NL6

CCDS

This transcript is a member of the Human CCDS set: CCDS77958

Transcript Support Level (TSL)

TSL:1

Version

ENST00000511426.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.