Human (GRCh38.p14)
Description

VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:HGNC Symbol;Acc:HGNC:20347]

Gene Synonyms

C14ORF133, HSPE-39, SPE-39, SPE39, VIPAR, VPS16B

Location
About this transcript

This transcript has 20 exons, is annotated with 10 domains and features, is associated with 12641 variant alleles and maps to 569 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000557658.6VIPAS39-2112530493aaENSP00000452191.1
 
Protein coding
CCDS9862Q9H9C1-1 NM_001193315.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000553888.5VIPAS39-2062934493aaENSP00000452181.1
 
Protein coding
CCDS9862Q9H9C1-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000343765.6VIPAS39-2022761493aaENSP00000339122.2
 
Protein coding
CCDS9862Q9H9C1-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000327028.8VIPAS39-2012614444aaENSP00000313098.5
 
Protein coding
CCDS53905Q9H9C1-2 -GENCODE basicTSL:5
ENST00000556412.4VIPAS39-2081832519aaENSP00000451857.1
 
Protein coding
G3V4K3 -GENCODE basicTSL:2
ENST00000448935.6VIPAS39-2031623444aaENSP00000404815.2
 
Protein coding
CCDS53905Q9H9C1-2 -GENCODE basicTSL:2
ENST00000557466.1VIPAS39-21053345aaENSP00000452176.1
 
Protein coding
G3V549 -TSL:4CDS 3' incomplete
ENST00000556909.1VIPAS39-209540No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000553691.5VIPAS39-205806No protein-
 
Retained intron
--TSL:5
ENST00000553576.5VIPAS39-204547No protein-
 
Retained intron
--TSL:4
ENST00000555854.1VIPAS39-207444No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,530 bps, Translation length: 493 residues

MANE

This MANE Select transcript contains ENSP00000452191 and matches to NM_001193315.2 and NP_001180244.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H9C1

CCDS

This transcript is a member of the Human CCDS set: CCDS9862

Transcript Support Level (TSL)

TSL:1

Version

ENST00000557658.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.