Human (GRCh38.p14)
Description

cleavage and polyadenylation specific factor 7 [Source:HGNC Symbol;Acc:HGNC:30098]

Gene Synonyms

CFIM59, FLJ12529

Location
About this transcript

This transcript has 10 exons, is annotated with 21 domains and features, is associated with 12269 variant alleles and maps to 469 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000439958.8CPSF7-2053487462aaENSP00000397203.3
 
Protein coding
CCDS44620Q8N684-2 NM_001142565.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000340437.8CPSF7-2013695514aaENSP00000345412.4
 
Protein coding
CCDS8006Q8N684-3 -GENCODE basicTSL:1
ENST00000394888.8CPSF7-2023650471aaENSP00000378352.4
 
Protein coding
CCDS44619Q8N684-1 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000448745.5CPSF7-2061749462aaENSP00000407394.1
 
Protein coding
CCDS44620Q8N684-2 -GENCODE basicAPPRIS P4TSL:5
ENST00000477890.6CPSF7-2111234374aaENSP00000437860.1
 
Protein coding
F5H669 -TSL:5CDS 3' incomplete
ENST00000539952.5CPSF7-219953288aaENSP00000438381.1
 
Protein coding
F5H047 -TSL:5CDS 3' incomplete
ENST00000413232.5CPSF7-204727204aaENSP00000393828.1
 
Protein coding
J3QT54 -TSL:3CDS 3' incomplete
ENST00000544585.5CPSF7-222722219aaENSP00000437531.1
 
Protein coding
F5H6M0 -TSL:2CDS 3' incomplete
ENST00000450000.5CPSF7-208574145aaENSP00000391359.1
 
Protein coding
C9J323 -TSL:4CDS 3' incomplete
ENST00000413184.6CPSF7-203571138aaENSP00000414295.2
 
Protein coding
C9JM38 -TSL:4CDS 3' incomplete
ENST00000449811.5CPSF7-207567143aaENSP00000392400.1
 
Protein coding
C9J286 -TSL:4CDS 3' incomplete
ENST00000541963.5CPSF7-22054998aaENSP00000446330.1
 
Protein coding
F5H1W4 -GENCODE basicTSL:4
ENST00000626926.1CPSF7-226306101aaENSP00000487286.1
 
Protein coding
F5H6P5 -GENCODE basicTSL:5
ENST00000535222.5CPSF7-214940100aaENSP00000446193.1
 
Nonsense mediated decay
F5H2K8 -TSL:3
ENST00000537162.5CPSF7-217801101aaENSP00000442819.1
 
Nonsense mediated decay
F5H6P5 -TSL:3
ENST00000544990.5CPSF7-224646102aaENSP00000440414.1
 
Nonsense mediated decay
F5GXA3 -TSL:3
ENST00000536548.5CPSF7-216598101aaENSP00000437467.1
 
Nonsense mediated decay
F5H6P5 -TSL:4
ENST00000536145.3CPSF7-215546101aaENSP00000437768.1
 
Nonsense mediated decay
F5H6A8 -TSL:4
ENST00000543545.5CPSF7-22149593aaENSP00000443504.1
 
Nonsense mediated decay
F5H5B7 -TSL:5
ENST00000494016.1CPSF7-213656No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000545934.5CPSF7-225565No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000463244.6CPSF7-209545No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000544669.5CPSF7-2231800No protein-
 
Retained intron
--TSL:5
ENST00000537641.5CPSF7-2181728No protein-
 
Retained intron
--TSL:5
ENST00000474684.1CPSF7-210635No protein-
 
Retained intron
--TSL:3
ENST00000489728.1CPSF7-212488No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 10, Coding exons: 8, Transcript length: 3,487 bps, Translation length: 462 residues

MANE

This MANE Select transcript contains ENSP00000397203 and matches to NM_001142565.3 and NP_001136037.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N684

CCDS

This transcript is a member of the Human CCDS set: CCDS44620

Transcript Support Level (TSL)

TSL:1

Version

ENST00000439958.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.