Human (GRCh38.p14)
Description

CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]

Gene Synonyms

NLIIF, SCP1

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 4989 variant alleles and maps to 241 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000273062.7CTDSP1-2012525261aaENSP00000273062.2
 
Protein coding
CCDS2416Q9GZU7-1 NM_021198.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000473420.6CTDSP1-2072584120aaENSP00000518508.1
 
Protein coding
--TSL:3
ENST00000710839.1CTDSP1-2192528120aaENSP00000518518.1
 
Protein coding
--GENCODE basic
ENST00000498160.6CTDSP1-2152524120aaENSP00000518509.1
 
Protein coding
--TSL:5
ENST00000710837.1CTDSP1-2172359260aaENSP00000518515.1
 
Protein coding
--GENCODE basicAPPRIS ALT1
ENST00000710828.1CTDSP1-2162326120aaENSP00000518506.1
 
Protein coding
--GENCODE basic
ENST00000452977.6CTDSP1-2052323268aaENSP00000404301.2
 
Protein coding
H7C270 -GENCODE basicTSL:5
ENST00000491064.6CTDSP1-2102309120aaENSP00000518507.1
 
Protein coding
--TSL:3
ENST00000488627.6CTDSP1-2091118120aaENSP00000518519.1
 
Protein coding
--GENCODE basicTSL:3
ENST00000443891.6CTDSP1-2041109120aaENSP00000392248.2
 
Protein coding
Q9GZU7-3 -GENCODE basicTSL:3
ENST00000464255.2CTDSP1-206926120aaENSP00000518520.1
 
Protein coding
--GENCODE basicTSL:5
ENST00000428361.6CTDSP1-202842120aaENSP00000518517.1
 
Protein coding
--GENCODE basicTSL:5
ENST00000710838.1CTDSP1-2182292114aaENSP00000518516.1
 
Nonsense mediated decay
---
ENST00000492545.1CTDSP1-211634No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000431127.2CTDSP1-203586No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000496785.5CTDSP1-213460No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000497677.5CTDSP1-214998No protein-
 
Retained intron
--TSL:2
ENST00000482272.5CTDSP1-208984No protein-
 
Retained intron
--TSL:2
ENST00000494067.5CTDSP1-212362No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,109 bps, Translation length: 120 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9GZU7

Transcript Support Level (TSL)

TSL:3

Version

ENST00000443891.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.